RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 TTLL3Q9Y4R7 772 aa11.72□□□□□ -0.53
GINS3-202ENST00000328514 STYXL1Q9Y6J8 313 aa11.72□□□□□ -0.53
GINS3-202ENST00000328514 C15orf38-AP3S2A0A0A6YYH1 394 aa11.71□□□□□ -0.53
GINS3-202ENST00000328514 APOC4-APOC2K7ER74 178 aa11.71□□□□□ -0.53
GINS3-202ENST00000328514 CST8O60676 142 aa11.71□□□□□ -0.53
GINS3-202ENST00000328514 APOC2P02655 101 aa11.71□□□□□ -0.53
GINS3-202ENST00000328514 TFAP2AP05549 437 aa11.71□□□□□ -0.53
GINS3-202ENST00000328514 WEE2P0C1S8 567 aa11.71□□□□□ -0.53
GINS3-202ENST00000328514 C6orf222P0C671 652 aaPredicted RBP11.71□□□□□ -0.53
GINS3-202ENST00000328514 SETSIPP0DME0 302 aa11.71□□□□□ -0.53
GINS3-202ENST00000328514 ACAT1P24752 427 aaKnown RBP11.71□□□□□ -0.53
GINS3-202ENST00000328514 PEX2P28328 305 aa11.71□□□□□ -0.53
GINS3-202ENST00000328514 JAK3P52333 1124 aa11.71□□□□□ -0.53
GINS3-202ENST00000328514 ALDH18A1P54886 795 aaKnown RBP11.71□□□□□ -0.53
GINS3-202ENST00000328514 HPCAP84074 193 aa11.71□□□□□ -0.53
GINS3-202ENST00000328514 TCP10Q12799 353 aa11.71□□□□□ -0.53
GINS3-202ENST00000328514 CHI3L2Q15782 390 aa11.71□□□□□ -0.53
GINS3-202ENST00000328514 UGCGQ16739 394 aa11.71□□□□□ -0.53
GINS3-202ENST00000328514 TKFCQ3LXA3 575 aa11.71□□□□□ -0.53
GINS3-202ENST00000328514 DCUN1D2Q6PH85 259 aa11.71□□□□□ -0.53
GINS3-202ENST00000328514 ARPINQ7Z6K5 226 aa11.71□□□□□ -0.53
GINS3-202ENST00000328514 KBTBD6Q86V97 674 aa11.71□□□□□ -0.53
GINS3-202ENST00000328514 RTKN2Q8IZC4 609 aa11.71□□□□□ -0.53
GINS3-202ENST00000328514 PYDC1Q8WXC3 89 aa11.71□□□□□ -0.53
GINS3-202ENST00000328514 MPP4Q96JB8 637 aa11.71□□□□□ -0.53
GINS3-202ENST00000328514 CATSPER2Q96P56 530 aa11.71□□□□□ -0.53
GINS3-202ENST00000328514 FAM213AQ9BRX8 229 aa11.71□□□□□ -0.53
GINS3-202ENST00000328514 ZC3H12CQ9C0D7 883 aaKnown RBP11.71□□□□□ -0.53
GINS3-202ENST00000328514 FAM96AQ9H5X1 160 aa11.71□□□□□ -0.53
GINS3-202ENST00000328514 ZNF510Q9Y2H8 683 aa11.71□□□□□ -0.53
GINS3-202ENST00000328514 RPS6KL1Q9Y6S9 549 aa11.71□□□□□ -0.53
GINS3-202ENST00000328514 BTAF1O14981 1849 aa11.71□□□□□ -0.54
GINS3-202ENST00000328514 H0YCG3 227 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 H3BNX3 289 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 HNRNPDLO14979 420 aaKnown RBP11.7□□□□□ -0.54
GINS3-202ENST00000328514 RIMBP2O15034 1052 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 CPA3P15088 417 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 SFNP31947 248 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 COPAP53621 1224 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 CNTN2Q02246 1040 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 FOLH1Q04609 750 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 UBAP2LQ14157 1087 aaKnown RBP11.7□□□□□ -0.54
GINS3-202ENST00000328514 HSP90AA5PQ58FG0 334 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 XKR9Q5GH70 373 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 LPCAT4Q643R3 524 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 TIFABQ6ZNK6 161 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 UNC45BQ8IWX7 931 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 LRRC43Q8N309 656 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 SLC25A41Q8N5S1 370 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 ICA1LQ8NDH6 482 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 BSNDQ8WZ55 320 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 MECRQ9BV79 373 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 KIFC3Q9BVG8 833 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 USP29Q9HBJ7 922 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 CLIC5Q9NZA1 410 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 C6orf203Q9P0P8 240 aaPredicted RBP11.7□□□□□ -0.54
GINS3-202ENST00000328514 CDH22Q9UJ99 828 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 SF3B1O75533 1304 aaKnown RBP eCLIP11.7□□□□□ -0.54
GINS3-202ENST00000328514 ENTPD3O75355 529 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 KRT38O76015 456 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 CD48P09326 243 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 ALOX15P16050 662 aaPredicted RBP11.7□□□□□ -0.54
GINS3-202ENST00000328514 EIF4BP23588 611 aaKnown RBP11.7□□□□□ -0.54
GINS3-202ENST00000328514 KDELR1P24390 212 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 PRDX6P30041 224 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 FDFT1P37268 417 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 MAGEA6P43360 314 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 RBM5P52756 815 aaKnown RBP eCLIP11.7□□□□□ -0.54
GINS3-202ENST00000328514 USP4Q13107 963 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 STX3Q13277 289 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.7□□□□□ -0.54
GINS3-202ENST00000328514 MDH1BQ5I0G3 518 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 SPOPLQ6IQ16 392 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 FBXL19Q6PCT2 694 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 C1orf228Q6PIY5 440 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 SAMD1Q6SPF0 538 aaPredicted RBP11.7□□□□□ -0.54
GINS3-202ENST00000328514 TMC7Q7Z402 723 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 FAM160B2Q86V87 743 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 WDR75Q8IWA0 830 aaKnown RBP11.7□□□□□ -0.54
GINS3-202ENST00000328514 AHI1Q8N157 1196 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 TMEM35BQ8NCS4 154 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 RDM1Q8NG50 284 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 PIWIL2Q8TC59 973 aaKnown RBP11.7□□□□□ -0.54
GINS3-202ENST00000328514 SLC26A7Q8TE54 656 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 GFM2Q969S9 779 aaKnown RBP11.7□□□□□ -0.54
GINS3-202ENST00000328514 RILPQ96NA2 401 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 MRPS26Q9BYN8 205 aaKnown RBP11.7□□□□□ -0.54
GINS3-202ENST00000328514 C20orf27Q9GZN8 174 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 ZNF696Q9H7X3 374 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 NRDE2Q9H7Z3 1164 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 SAE1Q9UBE0 346 aaPredicted RBP11.7□□□□□ -0.54
GINS3-202ENST00000328514 RAB26Q9ULW5 256 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 PADI4Q9UM07 663 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 AGTPBP1Q9UPW5 1226 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 POMPQ9Y244 141 aa11.7□□□□□ -0.54
GINS3-202ENST00000328514 LY75O60449 1722 aa11.69□□□□□ -0.54
GINS3-202ENST00000328514 NRXN2Q9P2S2 1712 aa11.69□□□□□ -0.54
GINS3-202ENST00000328514 TMEM150BA6NC51 233 aa11.69□□□□□ -0.54
GINS3-202ENST00000328514 ARHGAP42A6NI28 874 aa11.69□□□□□ -0.54
GINS3-202ENST00000328514 WDR64B1ANS9 1081 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms