RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 RAG1P15918 1043 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 VCPP55072 806 aaKnown RBP11.81□□□□□ -0.52
COL4A5-201ENST00000328300 C16orf89Q6UX73 402 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 LBX2Q6XYB7 198 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 CDR2LQ86X02 465 aaPredicted RBP11.81□□□□□ -0.52
COL4A5-201ENST00000328300 TRPM4Q8TD43 1214 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 DNAJC19Q96DA6 116 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 TASP1Q9H6P5 420 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 CRLS1Q9UJA2 301 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 RAD54BQ9Y620 910 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 AHDC1Q5TGY3 1603 aaPredicted RBP11.81□□□□□ -0.52
COL4A5-201ENST00000328300 ITGALP20701 1170 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 YWHAQP27348 245 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 AVPR1AP37288 418 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 AIF1P55008 147 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 SLC47A2Q86VL8 602 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 LRRC6Q86X45 466 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 DDX42Q86XP3 938 aaKnown RBP eCLIP11.81□□□□□ -0.52
COL4A5-201ENST00000328300 DDIASQ8IXT1 998 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 AGGF1Q8N302 714 aaeCLIP11.81□□□□□ -0.52
COL4A5-201ENST00000328300 OTUB1Q96FW1 271 aaPredicted RBP11.81□□□□□ -0.52
COL4A5-201ENST00000328300 RAD18Q9NS91 495 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 VPS26AO75436 327 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 TRPA1O75762 1119 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 GNRH1P01148 92 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 KRT4P19013 534 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 NPY2RP49146 381 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 HIST2H2ACQ16777 129 aaPredicted RBP11.81□□□□□ -0.52
COL4A5-201ENST00000328300 EPC2Q52LR7 807 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 SEZ6Q53EL9 994 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 HIST2H2AA3Q6FI13 130 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 POTEAQ6S8J7 498 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 NOP9Q86U38 636 aaKnown RBP11.81□□□□□ -0.52
COL4A5-201ENST00000328300 KATNAL2Q8IYT4 538 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 SYTL2Q9HCH5 934 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 SLC12A8A0AV02 714 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 KLRG2A4D1S0 409 aaPredicted RBP11.81□□□□□ -0.52
COL4A5-201ENST00000328300 ASMTLO95671 621 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 ASS1P00966 412 aaKnown RBP11.81□□□□□ -0.52
COL4A5-201ENST00000328300 VCLP18206 1134 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 MAP3K7CLP57077 242 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 OTUD4Q01804 1114 aaKnown RBP11.81□□□□□ -0.52
COL4A5-201ENST00000328300 SKIV2LQ15477 1246 aaKnown RBP11.81□□□□□ -0.52
COL4A5-201ENST00000328300 PCYOX1LQ8NBM8 494 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 CAVIN3Q969G5 261 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 ABTB1Q969K4 478 aaPredicted RBP11.81□□□□□ -0.52
COL4A5-201ENST00000328300 POPDC2Q9HBU9 364 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 SCUBE2Q9NQ36 999 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 ABCC13Q9NSE7 274 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.81□□□□□ -0.52
COL4A5-201ENST00000328300 HEATR9A2RTY3 570 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 SLCO1B7G3V0H7 640 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 ANGPT2O15123 496 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 KLRC4O43908 158 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 CAPN15O75808 1086 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 YY1P25490 414 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 TBX4P57082 545 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 SMTNL2Q2TAL5 461 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 TMEM199Q8N511 208 aa11.81□□□□□ -0.52
COL4A5-201ENST00000328300 ACO2Q99798 780 aaKnown RBP11.81□□□□□ -0.52
COL4A5-201ENST00000328300 PLEKP08567 350 aaPredicted RBP11.8□□□□□ -0.52
COL4A5-201ENST00000328300 PPM1AP35813 382 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 SLC20A1Q8WUM9 679 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 CLASP2O75122 1294 aaKnown RBP11.8□□□□□ -0.52
COL4A5-201ENST00000328300 MICAL2O94851 1124 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 FGF19O95750 216 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 TSHRP16473 764 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 INPP5AQ14642 412 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 NBPF20Q3BBV1 942 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.8□□□□□ -0.52
COL4A5-201ENST00000328300 SMYD5Q6GMV2 418 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 TOP6BLQ8N6T0 577 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 C9orf72Q96LT7 481 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 CCDC138Q96M89 665 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 KCNK16Q96T55 309 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 CDYLQ9Y232 598 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 SIK3Q9Y2K2 1263 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 USP15Q9Y4E8 981 aaPredicted RBP11.8□□□□□ -0.52
COL4A5-201ENST00000328300 A0A087X0B3 334 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 BTG3Q14201 252 aaPredicted RBP11.8□□□□□ -0.52
COL4A5-201ENST00000328300 LRRC39Q96DD0 335 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 NCANO14594 1321 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 ARHGAP10A1A4S6 786 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 SLC9A3R1O14745 358 aaPredicted RBP11.8□□□□□ -0.52
COL4A5-201ENST00000328300 CKMP06732 381 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 RBP1P09455 135 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 CHN1P15882 459 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 PMS1P54277 932 aaKnown RBP11.8□□□□□ -0.52
COL4A5-201ENST00000328300 NIFKQ9BYG3 293 aaKnown RBP11.8□□□□□ -0.52
COL4A5-201ENST00000328300 TRMT6Q9UJA5 497 aaKnown RBP11.8□□□□□ -0.52
COL4A5-201ENST00000328300 SYCE1LA8MT33 242 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 RHOBTB1O94844 696 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 MAPK1P28482 360 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 GYS2P54840 703 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 GRIK3Q13003 919 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 LRRC55Q6ZSA7 311 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 ARHGEF19Q8IW93 802 aa11.8□□□□□ -0.52
COL4A5-201ENST00000328300 POP1Q99575 1024 aaKnown RBP11.8□□□□□ -0.52
COL4A5-201ENST00000328300 PRPF18Q99633 342 aaKnown RBP11.8□□□□□ -0.52
COL4A5-201ENST00000328300 VAV3Q9UKW4 847 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms