RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 ZKSCAN8Q15776 578 aaPredicted RBP22.33■■□□□ 1.16
LIMS2-201ENST00000324938 BBS9Q3SYG4 887 aa22.33■■□□□ 1.16
LIMS2-201ENST00000324938 ZC3H12AQ5D1E8 599 aaKnown RBP22.33■■□□□ 1.16
LIMS2-201ENST00000324938 SLC9A4Q6AI14 798 aa22.33■■□□□ 1.16
LIMS2-201ENST00000324938 C3orf62Q6ZUJ4 267 aa22.33■■□□□ 1.16
LIMS2-201ENST00000324938 PQLC3Q8N755 202 aa22.33■■□□□ 1.16
LIMS2-201ENST00000324938 DPEP3Q9H4B8 488 aa22.33■■□□□ 1.16
LIMS2-201ENST00000324938 USP29Q9HBJ7 922 aa22.33■■□□□ 1.16
LIMS2-201ENST00000324938 GPATCH2LQ9NWQ4 482 aa22.33■■□□□ 1.16
LIMS2-201ENST00000324938 A8MXQ7 604 aa22.32■■□□□ 1.16
LIMS2-201ENST00000324938 ZNF487B1APH4 448 aa22.32■■□□□ 1.16
LIMS2-201ENST00000324938 PIRO00625 290 aa22.32■■□□□ 1.16
LIMS2-201ENST00000324938 RASSF9O75901 435 aa22.32■■□□□ 1.16
LIMS2-201ENST00000324938 FOXN2P32314 431 aa22.32■■□□□ 1.16
LIMS2-201ENST00000324938 PTPN9P43378 593 aa22.32■■□□□ 1.16
LIMS2-201ENST00000324938 EFTUD2Q15029 972 aaKnown RBP eCLIP22.32■■□□□ 1.16
LIMS2-201ENST00000324938 FBXO47Q5MNV8 452 aa22.32■■□□□ 1.16
LIMS2-201ENST00000324938 C1orf228Q6PIY5 440 aa22.32■■□□□ 1.16
LIMS2-201ENST00000324938 ADGRD1Q6QNK2 874 aa22.32■■□□□ 1.16
LIMS2-201ENST00000324938 FBF1Q8TES7 1133 aa22.32■■□□□ 1.16
LIMS2-201ENST00000324938 FAF2Q96CS3 445 aa22.32■■□□□ 1.16
LIMS2-201ENST00000324938 PLCD4Q9BRC7 762 aa22.32■■□□□ 1.16
LIMS2-201ENST00000324938 ZNF670Q9BS34 389 aa22.32■■□□□ 1.16
LIMS2-201ENST00000324938 SLC40A1Q9NP59 571 aa22.32■■□□□ 1.16
LIMS2-201ENST00000324938 SSU72Q9NP77 194 aaKnown RBP22.32■■□□□ 1.16
LIMS2-201ENST00000324938 ABCF3Q9NUQ8 709 aa22.32■■□□□ 1.16
LIMS2-201ENST00000324938 CFAP69A5D8W1 941 aa22.31■■□□□ 1.16
LIMS2-201ENST00000324938 CHADO15335 359 aa22.31■■□□□ 1.16
LIMS2-201ENST00000324938 CD4P01730 458 aa22.31■■□□□ 1.16
LIMS2-201ENST00000324938 SCNN1AP37088 669 aa22.31■■□□□ 1.16
LIMS2-201ENST00000324938 HDAC4P56524 1084 aa22.31■■□□□ 1.16
LIMS2-201ENST00000324938 ADAM17P78536 824 aa22.31■■□□□ 1.16
LIMS2-201ENST00000324938 BST2Q10589 180 aaKnown RBP22.31■■□□□ 1.16
LIMS2-201ENST00000324938 CBLBQ13191 982 aa22.31■■□□□ 1.16
LIMS2-201ENST00000324938 SPARCL1Q14515 664 aa22.31■■□□□ 1.16
LIMS2-201ENST00000324938 MFSD10Q14728 455 aa22.31■■□□□ 1.16
LIMS2-201ENST00000324938 MTFR1Q15390 333 aa22.31■■□□□ 1.16
LIMS2-201ENST00000324938 PALM2Q8IXS6 379 aa22.31■■□□□ 1.16
LIMS2-201ENST00000324938 C4orf33Q8N1A6 199 aa22.31■■□□□ 1.16
LIMS2-201ENST00000324938 PPP1R13LQ8WUF5 828 aa22.31■■□□□ 1.16
LIMS2-201ENST00000324938 KBTBD7Q8WVZ9 684 aa22.31■■□□□ 1.16
LIMS2-201ENST00000324938 B3GNT5Q9BYG0 378 aa22.31■■□□□ 1.16
LIMS2-201ENST00000324938 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.31■■□□□ 1.16
LIMS2-201ENST00000324938 PAK5Q9P286 719 aa22.31■■□□□ 1.16
LIMS2-201ENST00000324938 PRKAG3Q9UGI9 489 aa22.31■■□□□ 1.16
LIMS2-201ENST00000324938 ARL2BPQ9Y2Y0 163 aa22.31■■□□□ 1.16
LIMS2-201ENST00000324938 TYROBPO43914 113 aa22.31■■□□□ 1.16
LIMS2-201ENST00000324938 BCAT1P54687 386 aa22.31■■□□□ 1.16
LIMS2-201ENST00000324938 XRCC4Q13426 336 aa22.31■■□□□ 1.16
LIMS2-201ENST00000324938 HIC1Q14526 733 aa22.31■■□□□ 1.16
LIMS2-201ENST00000324938 CA9Q16790 459 aa22.31■■□□□ 1.16
LIMS2-201ENST00000324938 CGB2Q6NT52 195 aa22.31■■□□□ 1.16
LIMS2-201ENST00000324938 RGS9BPQ6ZS82 235 aa22.31■■□□□ 1.16
LIMS2-201ENST00000324938 SLC26A9Q7LBE3 791 aa22.31■■□□□ 1.16
LIMS2-201ENST00000324938 CRYBG2Q8N1P7 616 aa22.31■■□□□ 1.16
LIMS2-201ENST00000324938 PCDH19Q8TAB3 1148 aa22.31■■□□□ 1.16
LIMS2-201ENST00000324938 GRAMD1AQ96CP6 724 aa22.31■■□□□ 1.16
LIMS2-201ENST00000324938 MRRFQ96E11 262 aaKnown RBP22.31■■□□□ 1.16
LIMS2-201ENST00000324938 ZNF560Q96MR9 790 aa22.31■■□□□ 1.16
LIMS2-201ENST00000324938 PAFAH2Q99487 392 aa22.31■■□□□ 1.16
LIMS2-201ENST00000324938 C11orf84Q9BUA3 381 aaPredicted RBP22.31■■□□□ 1.16
LIMS2-201ENST00000324938 APOL6Q9BWW8 343 aa22.31■■□□□ 1.16
LIMS2-201ENST00000324938 ATP2A2P16615 1042 aaKnown RBP22.3■■□□□ 1.16
LIMS2-201ENST00000324938 AKAP5P24588 427 aa22.3■■□□□ 1.16
LIMS2-201ENST00000324938 RPL34P49207 117 aaKnown RBP22.3■■□□□ 1.16
LIMS2-201ENST00000324938 BCAR1P56945 870 aa22.3■■□□□ 1.16
LIMS2-201ENST00000324938 SNX17Q15036 470 aa22.3■■□□□ 1.16
LIMS2-201ENST00000324938 PRAMEF19Q5SWL8 479 aa22.3■■□□□ 1.16
LIMS2-201ENST00000324938 ARCQ7LC44 396 aa22.3■■□□□ 1.16
LIMS2-201ENST00000324938 TLK2Q86UE8 772 aa22.3■■□□□ 1.16
LIMS2-201ENST00000324938 ANKRD52Q8NB46 1076 aa22.3■■□□□ 1.16
LIMS2-201ENST00000324938 DNAJB3Q8WWF6 145 aa22.3■■□□□ 1.16
LIMS2-201ENST00000324938 TSPAN18Q96SJ8 248 aa22.3■■□□□ 1.16
LIMS2-201ENST00000324938 LPIN3Q9BQK8 851 aa22.3■■□□□ 1.16
LIMS2-201ENST00000324938 CYLDQ9NQC7 956 aa22.3■■□□□ 1.16
LIMS2-201ENST00000324938 GDAP2Q9NXN4 497 aa22.3■■□□□ 1.16
LIMS2-201ENST00000324938 PIN4Q9Y237 131 aaKnown RBP22.3■■□□□ 1.16
LIMS2-201ENST00000324938 SMIM28A0A1B0GU29 152 aa22.3■■□□□ 1.16
LIMS2-201ENST00000324938 A0A1W2PPM1 405 aa22.3■■□□□ 1.16
LIMS2-201ENST00000324938 BCLAF3A2AJT9 711 aaKnown RBP22.3■■□□□ 1.16
LIMS2-201ENST00000324938 HCRTO43612 131 aa22.3■■□□□ 1.16
LIMS2-201ENST00000324938 XKR4Q5GH76 650 aa22.3■■□□□ 1.16
LIMS2-201ENST00000324938 MORN1Q5T089 497 aa22.3■■□□□ 1.16
LIMS2-201ENST00000324938 TMEM40Q8WWA1 233 aa22.3■■□□□ 1.16
LIMS2-201ENST00000324938 CHMP2BQ9UQN3 213 aa22.3■■□□□ 1.16
LIMS2-201ENST00000324938 KPNA7A9QM74 516 aa22.29■■□□□ 1.16
LIMS2-201ENST00000324938 KCNN4O15554 427 aa22.29■■□□□ 1.16
LIMS2-201ENST00000324938 XPOTO43592 962 aaKnown RBP22.29■■□□□ 1.16
LIMS2-201ENST00000324938 FGFR1P11362 822 aa22.29■■□□□ 1.16
LIMS2-201ENST00000324938 CCDC130P13994 396 aa22.29■■□□□ 1.16
LIMS2-201ENST00000324938 KCNE1P15382 129 aa22.29■■□□□ 1.16
LIMS2-201ENST00000324938 CA4P22748 312 aa22.29■■□□□ 1.16
LIMS2-201ENST00000324938 RPA3P35244 121 aaPredicted RBP22.29■■□□□ 1.16
LIMS2-201ENST00000324938 PNPLA4P41247 253 aa22.29■■□□□ 1.16
LIMS2-201ENST00000324938 C7orf31Q8N865 590 aa22.29■■□□□ 1.16
LIMS2-201ENST00000324938 MZB1Q8WU39 189 aa22.29■■□□□ 1.16
LIMS2-201ENST00000324938 CENPIQ92674 756 aaPredicted RBP22.29■■□□□ 1.16
LIMS2-201ENST00000324938 PAIP2Q9BPZ3 127 aaKnown RBP22.29■■□□□ 1.16
LIMS2-201ENST00000324938 RNF19AQ9NV58 838 aa22.29■■□□□ 1.16
LIMS2-201ENST00000324938 TEX264Q9Y6I9 313 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms