RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 FBXO21O94952 628 aa13.36□□□□□ -0.27
DDX39A-202ENST00000324340 GOLGA6DP0CG33 693 aa13.36□□□□□ -0.27
DDX39A-202ENST00000324340 ATP2A2P16615 1042 aaKnown RBP13.36□□□□□ -0.27
DDX39A-202ENST00000324340 BDNFP23560 247 aa13.36□□□□□ -0.27
DDX39A-202ENST00000324340 CTNNA2P26232 953 aa13.36□□□□□ -0.27
DDX39A-202ENST00000324340 ELF1P32519 619 aa13.36□□□□□ -0.27
DDX39A-202ENST00000324340 CTNNA1P35221 906 aaKnown RBP13.36□□□□□ -0.27
DDX39A-202ENST00000324340 MAGEA11P43364 429 aa13.36□□□□□ -0.27
DDX39A-202ENST00000324340 ADCY1Q08828 1119 aa13.36□□□□□ -0.27
DDX39A-202ENST00000324340 NNTQ13423 1086 aa13.36□□□□□ -0.27
DDX39A-202ENST00000324340 ACAP1Q15027 740 aa13.36□□□□□ -0.27
DDX39A-202ENST00000324340 FAM102AQ5T9C2 384 aaPredicted RBP13.36□□□□□ -0.27
DDX39A-202ENST00000324340 VSTM1Q6UX27 236 aa13.36□□□□□ -0.27
DDX39A-202ENST00000324340 RSPO2Q6UXX9 243 aaPredicted RBP13.36□□□□□ -0.27
DDX39A-202ENST00000324340 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.36□□□□□ -0.27
DDX39A-202ENST00000324340 C2orf15Q8WU43 125 aaKnown RBP13.36□□□□□ -0.27
DDX39A-202ENST00000324340 PIWIL1Q96J94 861 aaKnown RBP13.36□□□□□ -0.27
DDX39A-202ENST00000324340 RHOBTB2Q9BYZ6 727 aa13.36□□□□□ -0.27
DDX39A-202ENST00000324340 GOLGA6AQ9NYA3 693 aa13.36□□□□□ -0.27
DDX39A-202ENST00000324340 PCDHB5Q9Y5E4 795 aa13.36□□□□□ -0.27
DDX39A-202ENST00000324340 PCDHB12Q9Y5F1 795 aa13.36□□□□□ -0.27
DDX39A-202ENST00000324340 C2CD4BA6NLJ0 364 aa13.35□□□□□ -0.27
DDX39A-202ENST00000324340 PIK3R2O00459 728 aa13.35□□□□□ -0.27
DDX39A-202ENST00000324340 DPYSL4O14531 572 aa13.35□□□□□ -0.27
DDX39A-202ENST00000324340 GLI1P08151 1106 aa13.35□□□□□ -0.27
DDX39A-202ENST00000324340 LCP1P13796 627 aa13.35□□□□□ -0.27
DDX39A-202ENST00000324340 GLUD2P49448 558 aa13.35□□□□□ -0.27
DDX39A-202ENST00000324340 TKTL1P51854 596 aa13.35□□□□□ -0.27
DDX39A-202ENST00000324340 MRPS5P82675 430 aaKnown RBP13.35□□□□□ -0.27
DDX39A-202ENST00000324340 ADIGQ0VDE8 80 aa13.35□□□□□ -0.27
DDX39A-202ENST00000324340 PSMD5Q16401 504 aa13.35□□□□□ -0.27
DDX39A-202ENST00000324340 C11orf91Q3C1V1 193 aa13.35□□□□□ -0.27
DDX39A-202ENST00000324340 EFHC1Q5JVL4 640 aa13.35□□□□□ -0.27
DDX39A-202ENST00000324340 TRNP1Q6NT89 227 aa13.35□□□□□ -0.27
DDX39A-202ENST00000324340 PRSS55Q6UWB4 352 aaPredicted RBP13.35□□□□□ -0.27
DDX39A-202ENST00000324340 SPPL2BQ8TCT7 592 aa13.35□□□□□ -0.27
DDX39A-202ENST00000324340 CLEC4CQ8WTT0 213 aa13.35□□□□□ -0.27
DDX39A-202ENST00000324340 C8orf48Q96LL4 319 aa13.35□□□□□ -0.27
DDX39A-202ENST00000324340 ZBED2Q9BTP6 218 aa13.35□□□□□ -0.27
DDX39A-202ENST00000324340 ACTR5Q9H9F9 607 aaPredicted RBP13.35□□□□□ -0.27
DDX39A-202ENST00000324340 LRRC4Q9HBW1 653 aa13.35□□□□□ -0.27
DDX39A-202ENST00000324340 CNGB3Q9NQW8 809 aa13.35□□□□□ -0.27
DDX39A-202ENST00000324340 ASNSD1Q9NWL6 643 aa13.35□□□□□ -0.27
DDX39A-202ENST00000324340 PCDHA3Q9Y5H8 950 aa13.35□□□□□ -0.27
DDX39A-202ENST00000324340 MTMR11A4FU01 709 aa13.34□□□□□ -0.27
DDX39A-202ENST00000324340 TMEM110-MUSTN1A8MSY1 372 aa13.34□□□□□ -0.27
DDX39A-202ENST00000324340 TNFRSF10BO14763 440 aa13.34□□□□□ -0.27
DDX39A-202ENST00000324340 SPOPO43791 374 aa13.34□□□□□ -0.27
DDX39A-202ENST00000324340 SRGAP2O75044 1071 aa13.34□□□□□ -0.27
DDX39A-202ENST00000324340 SLC34A2O95436 690 aa13.34□□□□□ -0.27
DDX39A-202ENST00000324340 VNN2O95498 520 aa13.34□□□□□ -0.27
DDX39A-202ENST00000324340 CYP2F1P24903 491 aa13.34□□□□□ -0.27
DDX39A-202ENST00000324340 TNFRSF8P28908 595 aa13.34□□□□□ -0.27
DDX39A-202ENST00000324340 CCT5P48643 541 aa13.34□□□□□ -0.27
DDX39A-202ENST00000324340 LIG3P49916 1009 aa13.34□□□□□ -0.27
DDX39A-202ENST00000324340 PEX5P50542 639 aa13.34□□□□□ -0.27
DDX39A-202ENST00000324340 ZNF143P52747 638 aaPredicted RBP13.34□□□□□ -0.27
DDX39A-202ENST00000324340 PM20D1Q6GTS8 502 aa13.34□□□□□ -0.27
DDX39A-202ENST00000324340 GPRIN1Q7Z2K8 1008 aa13.34□□□□□ -0.27
DDX39A-202ENST00000324340 CPNE8Q86YQ8 564 aa13.34□□□□□ -0.27
DDX39A-202ENST00000324340 CREG2Q8IUH2 290 aa13.34□□□□□ -0.27
DDX39A-202ENST00000324340 OTUD6BQ8N6M0 293 aa13.34□□□□□ -0.27
DDX39A-202ENST00000324340 EMC1Q8N766 993 aa13.34□□□□□ -0.27
DDX39A-202ENST00000324340 FBXO22Q8NEZ5 403 aa13.34□□□□□ -0.27
DDX39A-202ENST00000324340 RIN2Q8WYP3 895 aaPredicted RBP13.34□□□□□ -0.27
DDX39A-202ENST00000324340 P3H4Q92791 437 aa13.34□□□□□ -0.27
DDX39A-202ENST00000324340 MIEF2Q96C03 454 aa13.34□□□□□ -0.27
DDX39A-202ENST00000324340 PBKQ96KB5 322 aa13.34□□□□□ -0.27
DDX39A-202ENST00000324340 CARD9Q9H257 536 aa13.34□□□□□ -0.27
DDX39A-202ENST00000324340 RNF14Q9UBS8 474 aa13.34□□□□□ -0.27
DDX39A-202ENST00000324340 NR2E3Q9Y5X4 410 aa13.34□□□□□ -0.27
DDX39A-202ENST00000324340 USP3Q9Y6I4 520 aa13.34□□□□□ -0.27
DDX39A-202ENST00000324340 F8VP50 259 aa13.33□□□□□ -0.27
DDX39A-202ENST00000324340 ZNF185O15231 689 aa13.33□□□□□ -0.27
DDX39A-202ENST00000324340 SART1O43290 800 aaKnown RBP13.33□□□□□ -0.27
DDX39A-202ENST00000324340 PSTPIP1O43586 416 aa13.33□□□□□ -0.27
DDX39A-202ENST00000324340 TLL1O43897 1013 aa13.33□□□□□ -0.27
DDX39A-202ENST00000324340 HSF2BPO75031 334 aa13.33□□□□□ -0.27
DDX39A-202ENST00000324340 FGF18O76093 207 aa13.33□□□□□ -0.27
DDX39A-202ENST00000324340 RHOXF2BP0C7M4 288 aa13.33□□□□□ -0.27
DDX39A-202ENST00000324340 CPB1P15086 417 aa13.33□□□□□ -0.27
DDX39A-202ENST00000324340 GPD1P21695 349 aa13.33□□□□□ -0.27
DDX39A-202ENST00000324340 PSMA2P25787 234 aa13.33□□□□□ -0.27
DDX39A-202ENST00000324340 FLT3P36888 993 aa13.33□□□□□ -0.27
DDX39A-202ENST00000324340 PTPN9P43378 593 aa13.33□□□□□ -0.27
DDX39A-202ENST00000324340 NDUFV1P49821 464 aa13.33□□□□□ -0.27
DDX39A-202ENST00000324340 DAOAP59103 153 aa13.33□□□□□ -0.27
DDX39A-202ENST00000324340 KRT17Q04695 432 aa13.33□□□□□ -0.27
DDX39A-202ENST00000324340 TAF5Q15542 800 aa13.33□□□□□ -0.27
DDX39A-202ENST00000324340 PTPROQ16827 1216 aa13.33□□□□□ -0.27
DDX39A-202ENST00000324340 LRRC38Q5VT99 294 aa13.33□□□□□ -0.27
DDX39A-202ENST00000324340 DCAF12L1Q5VU92 463 aa13.33□□□□□ -0.27
DDX39A-202ENST00000324340 KIAA1841Q6NSI8 718 aa13.33□□□□□ -0.27
DDX39A-202ENST00000324340 CCNI2Q6ZMN8 369 aaPredicted RBP13.33□□□□□ -0.27
DDX39A-202ENST00000324340 BHLHA9Q7RTU4 235 aa13.33□□□□□ -0.27
DDX39A-202ENST00000324340 ZNF572Q7Z3I7 529 aaPredicted RBP13.33□□□□□ -0.27
DDX39A-202ENST00000324340 SIX6OS1Q8N1H7 587 aa13.33□□□□□ -0.27
DDX39A-202ENST00000324340 RASGEF1CQ8N431 466 aa13.33□□□□□ -0.27
DDX39A-202ENST00000324340 UBL4BQ8N7F7 174 aa13.33□□□□□ -0.27
DDX39A-202ENST00000324340 BCAS4Q8TDM0 211 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms