RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 PGM1P36871 562 aa20.67■□□□□ 0.9
CRLF3-201ENST00000324238 CRADDP78560 199 aa20.67■□□□□ 0.9
CRLF3-201ENST00000324238 MXRA7P84157 204 aa20.67■□□□□ 0.9
CRLF3-201ENST00000324238 OR6B2Q6IFH4 312 aa20.67■□□□□ 0.9
CRLF3-201ENST00000324238 XRRA1Q6P2D8 792 aa20.67■□□□□ 0.9
CRLF3-201ENST00000324238 MPP5Q8N3R9 675 aa20.67■□□□□ 0.9
CRLF3-201ENST00000324238 ENDOVQ8N8Q3 282 aaKnown RBP20.67■□□□□ 0.9
CRLF3-201ENST00000324238 SKA1Q96BD8 255 aa20.67■□□□□ 0.9
CRLF3-201ENST00000324238 APOPT1Q96IL0 206 aa20.67■□□□□ 0.9
CRLF3-201ENST00000324238 PGLYRP2Q96PD5 576 aa20.67■□□□□ 0.9
CRLF3-201ENST00000324238 NGRNQ9NPE2 291 aaKnown RBP20.67■□□□□ 0.9
CRLF3-201ENST00000324238 GINS2Q9Y248 185 aa20.67■□□□□ 0.9
CRLF3-201ENST00000324238 SOWAHBA6NEL2 793 aa20.67■□□□□ 0.9
CRLF3-201ENST00000324238 E7ESA3 106 aa20.67■□□□□ 0.9
CRLF3-201ENST00000324238 OGTO15294 1046 aa20.67■□□□□ 0.9
CRLF3-201ENST00000324238 TM9SF1O15321 606 aa20.67■□□□□ 0.9
CRLF3-201ENST00000324238 MICAL2O94851 1124 aa20.67■□□□□ 0.9
CRLF3-201ENST00000324238 HMGCRP04035 888 aa20.67■□□□□ 0.9
CRLF3-201ENST00000324238 NEK3P51956 506 aa20.67■□□□□ 0.9
CRLF3-201ENST00000324238 CHI3L2Q15782 390 aa20.67■□□□□ 0.9
CRLF3-201ENST00000324238 SPDYE1Q8NFV5 336 aaPredicted RBP20.67■□□□□ 0.9
CRLF3-201ENST00000324238 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.67■□□□□ 0.9
CRLF3-201ENST00000324238 SLC44A1Q8WWI5 657 aa20.67■□□□□ 0.9
CRLF3-201ENST00000324238 NRBP2Q9NSY0 501 aa20.67■□□□□ 0.9
CRLF3-201ENST00000324238 SIX4Q9UIU6 781 aa20.67■□□□□ 0.9
CRLF3-201ENST00000324238 APOC4-APOC2K7ER74 178 aa20.67■□□□□ 0.9
CRLF3-201ENST00000324238 TRAFD1O14545 582 aaPredicted RBP20.67■□□□□ 0.9
CRLF3-201ENST00000324238 APOC2P02655 101 aa20.67■□□□□ 0.9
CRLF3-201ENST00000324238 CA9Q16790 459 aa20.67■□□□□ 0.9
CRLF3-201ENST00000324238 C16orf46Q6P387 395 aa20.67■□□□□ 0.9
CRLF3-201ENST00000324238 CCDC62Q6P9F0 684 aa20.67■□□□□ 0.9
CRLF3-201ENST00000324238 KBTBD2Q8IY47 623 aa20.67■□□□□ 0.9
CRLF3-201ENST00000324238 NIPA2Q8N8Q9 360 aa20.67■□□□□ 0.9
CRLF3-201ENST00000324238 LPIN3Q9BQK8 851 aa20.67■□□□□ 0.9
CRLF3-201ENST00000324238 SAR1AQ9NR31 198 aa20.67■□□□□ 0.9
CRLF3-201ENST00000324238 ZC3H7BQ9UGR2 993 aaKnown RBP20.67■□□□□ 0.9
CRLF3-201ENST00000324238 CPSF3Q9UKF6 684 aaKnown RBP20.67■□□□□ 0.9
CRLF3-201ENST00000324238 TEX264Q9Y6I9 313 aa20.67■□□□□ 0.9
CRLF3-201ENST00000324238 BRCA2P51587 3418 aa20.66■□□□□ 0.9
CRLF3-201ENST00000324238 USP1O94782 785 aa20.66■□□□□ 0.9
CRLF3-201ENST00000324238 PDGFRAP16234 1089 aa20.66■□□□□ 0.9
CRLF3-201ENST00000324238 POLR2BP30876 1174 aaKnown RBP20.66■□□□□ 0.9
CRLF3-201ENST00000324238 LMNTD2Q8IXW0 634 aa20.66■□□□□ 0.9
CRLF3-201ENST00000324238 SLC4A11Q8NBS3 891 aa20.66■□□□□ 0.9
CRLF3-201ENST00000324238 RXFP2Q8WXD0 754 aa20.66■□□□□ 0.9
CRLF3-201ENST00000324238 ZNF333Q96JL9 665 aa20.66■□□□□ 0.9
CRLF3-201ENST00000324238 EBF4Q9BQW3 602 aa20.66■□□□□ 0.9
CRLF3-201ENST00000324238 IL1RAPL1Q9NZN1 696 aa20.66■□□□□ 0.9
CRLF3-201ENST00000324238 LNPEPQ9UIQ6 1025 aa20.66■□□□□ 0.9
CRLF3-201ENST00000324238 MYO18AQ92614 2054 aaKnown RBP20.66■□□□□ 0.9
CRLF3-201ENST00000324238 LUC7L3O95232 432 aaKnown RBP20.66■□□□□ 0.9
CRLF3-201ENST00000324238 IQCF3P0C7M6 154 aa20.66■□□□□ 0.9
CRLF3-201ENST00000324238 UBAP2LQ14157 1087 aaKnown RBP20.66■□□□□ 0.9
CRLF3-201ENST00000324238 ZNF667Q5HYK9 610 aa20.66■□□□□ 0.9
CRLF3-201ENST00000324238 POLNQ7Z5Q5 900 aa20.66■□□□□ 0.9
CRLF3-201ENST00000324238 FBXO16Q8IX29 292 aaPredicted RBP20.66■□□□□ 0.9
CRLF3-201ENST00000324238 ARHGEF4Q9NR80 690 aa20.66■□□□□ 0.9
CRLF3-201ENST00000324238 PSMG1O95456 288 aa20.65■□□□□ 0.9
CRLF3-201ENST00000324238 BAG2O95816 211 aa20.65■□□□□ 0.9
CRLF3-201ENST00000324238 TNNC2P02585 160 aa20.65■□□□□ 0.9
CRLF3-201ENST00000324238 CSH1P0DML2 217 aa20.65■□□□□ 0.9
CRLF3-201ENST00000324238 CSH2P0DML3 217 aa20.65■□□□□ 0.9
CRLF3-201ENST00000324238 ATXN1P54253 815 aaKnown RBP20.65■□□□□ 0.9
CRLF3-201ENST00000324238 AQP5P55064 265 aa20.65■□□□□ 0.9
CRLF3-201ENST00000324238 YWHAZP63104 245 aaKnown RBP20.65■□□□□ 0.9
CRLF3-201ENST00000324238 TSNAXIP1Q2TAA8 658 aa20.65■□□□□ 0.9
CRLF3-201ENST00000324238 MAP1SQ66K74 1059 aaPredicted RBP20.65■□□□□ 0.9
CRLF3-201ENST00000324238 SH2D5Q6ZV89 423 aa20.65■□□□□ 0.9
CRLF3-201ENST00000324238 TEX9Q8N6V9 391 aa20.65■□□□□ 0.9
CRLF3-201ENST00000324238 EFCAB3Q8N7B9 438 aa20.65■□□□□ 0.9
CRLF3-201ENST00000324238 OTUD5Q96G74 571 aa20.65■□□□□ 0.9
CRLF3-201ENST00000324238 RILPQ96NA2 401 aa20.65■□□□□ 0.9
CRLF3-201ENST00000324238 TTC1Q99614 292 aa20.65■□□□□ 0.9
CRLF3-201ENST00000324238 THTPAQ9BU02 230 aa20.65■□□□□ 0.9
CRLF3-201ENST00000324238 TLE6Q9H808 572 aa20.65■□□□□ 0.9
CRLF3-201ENST00000324238 PLAC1Q9HBJ0 212 aa20.65■□□□□ 0.9
CRLF3-201ENST00000324238 ARID2Q68CP9 1835 aa20.65■□□□□ 0.9
CRLF3-201ENST00000324238 DCAF8L1A6NGE4 600 aa20.65■□□□□ 0.9
CRLF3-201ENST00000324238 LYPLA1O75608 230 aaPredicted RBP20.65■□□□□ 0.9
CRLF3-201ENST00000324238 UBTFL6P0CB48 400 aaPredicted RBP20.65■□□□□ 0.9
CRLF3-201ENST00000324238 TFE3P19532 575 aaPredicted RBP20.65■□□□□ 0.9
CRLF3-201ENST00000324238 PTPN7P35236 360 aa20.65■□□□□ 0.9
CRLF3-201ENST00000324238 MRPS5P82675 430 aaKnown RBP20.65■□□□□ 0.9
CRLF3-201ENST00000324238 KRT81Q14533 505 aa20.65■□□□□ 0.9
CRLF3-201ENST00000324238 LRRC36Q1X8D7 754 aa20.65■□□□□ 0.9
CRLF3-201ENST00000324238 C1orf127Q8N9H9 656 aa20.65■□□□□ 0.9
CRLF3-201ENST00000324238 TTC13Q8NBP0 860 aa20.65■□□□□ 0.9
CRLF3-201ENST00000324238 FBXO41Q8TF61 875 aa20.65■□□□□ 0.9
CRLF3-201ENST00000324238 STMN2Q93045 179 aa20.65■□□□□ 0.9
CRLF3-201ENST00000324238 STRIP2Q9ULQ0 834 aa20.65■□□□□ 0.9
CRLF3-201ENST00000324238 PCDHGC3Q9UN70 934 aa20.65■□□□□ 0.9
CRLF3-201ENST00000324238 VGLL4Q14135 290 aa20.64■□□□□ 0.9
CRLF3-201ENST00000324238 BSPRYQ5W0U4 402 aa20.64■□□□□ 0.9
CRLF3-201ENST00000324238 RBM15BQ8NDT2 890 aaKnown RBP20.64■□□□□ 0.9
CRLF3-201ENST00000324238 CMASQ8NFW8 434 aaPredicted RBP20.64■□□□□ 0.9
CRLF3-201ENST00000324238 FER1L6Q2WGJ9 1857 aa20.64■□□□□ 0.89
CRLF3-201ENST00000324238 COL11A1P12107 1806 aaPredicted RBP20.64■□□□□ 0.89
CRLF3-201ENST00000324238 DHRS4L1P0CG22 281 aa20.64■□□□□ 0.89
CRLF3-201ENST00000324238 TARBP2Q15633 366 aaKnown RBP20.64■□□□□ 0.89
CRLF3-201ENST00000324238 POU5F2Q8N7G0 328 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms