RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 CYP26B1Q9NR63 512 aa17.2■□□□□ 0.34
PACS1-201ENST00000320580 PDLIM1O00151 329 aa17.19■□□□□ 0.34
PACS1-201ENST00000320580 RPS6KA4O75676 772 aa17.19■□□□□ 0.34
PACS1-201ENST00000320580 CETPP11597 493 aa17.19■□□□□ 0.34
PACS1-201ENST00000320580 ME2P23368 584 aa17.19■□□□□ 0.34
PACS1-201ENST00000320580 SMARCA1P28370 1054 aa17.19■□□□□ 0.34
PACS1-201ENST00000320580 DAB2P98082 770 aa17.19■□□□□ 0.34
PACS1-201ENST00000320580 MOGSQ13724 837 aa17.19■□□□□ 0.34
PACS1-201ENST00000320580 SETD3Q86TU7 594 aaPredicted RBP17.19■□□□□ 0.34
PACS1-201ENST00000320580 CCNYQ8ND76 341 aa17.19■□□□□ 0.34
PACS1-201ENST00000320580 FEZF2Q8TBJ5 459 aa17.19■□□□□ 0.34
PACS1-201ENST00000320580 ACTL9Q8TC94 416 aa17.19■□□□□ 0.34
PACS1-201ENST00000320580 PCDH9Q9HC56 1237 aa17.19■□□□□ 0.34
PACS1-201ENST00000320580 NGRNQ9NPE2 291 aaKnown RBP17.19■□□□□ 0.34
PACS1-201ENST00000320580 PCDHB2Q9Y5E7 798 aa17.19■□□□□ 0.34
PACS1-201ENST00000320580 CPNE8Q86YQ8 564 aa17.19■□□□□ 0.34
PACS1-201ENST00000320580 POLR1BQ9H9Y6 1135 aa17.19■□□□□ 0.34
PACS1-201ENST00000320580 CRABP2P29373 138 aa17.19■□□□□ 0.34
PACS1-201ENST00000320580 CDH6P55285 790 aa17.19■□□□□ 0.34
PACS1-201ENST00000320580 MARSP56192 900 aaKnown RBP17.19■□□□□ 0.34
PACS1-201ENST00000320580 MFSD7Q6UXD7 560 aa17.19■□□□□ 0.34
PACS1-201ENST00000320580 TRIM72Q6ZMU5 477 aa17.19■□□□□ 0.34
PACS1-201ENST00000320580 FRA10AC1Q70Z53 315 aa17.19■□□□□ 0.34
PACS1-201ENST00000320580 PTAR1Q7Z6K3 402 aaPredicted RBP17.19■□□□□ 0.34
PACS1-201ENST00000320580 PDSS2Q86YH6 399 aa17.19■□□□□ 0.34
PACS1-201ENST00000320580 PIWIL2Q8TC59 973 aaKnown RBP17.19■□□□□ 0.34
PACS1-201ENST00000320580 TELO2Q9Y4R8 837 aa17.19■□□□□ 0.34
PACS1-201ENST00000320580 H0YIN7 160 aa17.19■□□□□ 0.34
PACS1-201ENST00000320580 HALP42357 657 aa17.19■□□□□ 0.34
PACS1-201ENST00000320580 INPP5AQ14642 412 aa17.19■□□□□ 0.34
PACS1-201ENST00000320580 RSBN1Q5VWQ0 802 aaPredicted RBP17.19■□□□□ 0.34
PACS1-201ENST00000320580 C16orf46Q6P387 395 aa17.19■□□□□ 0.34
PACS1-201ENST00000320580 TAS2R42Q7RTR8 314 aa17.19■□□□□ 0.34
PACS1-201ENST00000320580 KBTBD2Q8IY47 623 aa17.19■□□□□ 0.34
PACS1-201ENST00000320580 SERPINB13Q9UIV8 391 aa17.19■□□□□ 0.34
PACS1-201ENST00000320580 ZNF862O60290 1169 aa17.18■□□□□ 0.34
PACS1-201ENST00000320580 P4HBP07237 508 aaKnown RBP17.18■□□□□ 0.34
PACS1-201ENST00000320580 GLRA2P23416 452 aa17.18■□□□□ 0.34
PACS1-201ENST00000320580 BCAR1P56945 870 aa17.18■□□□□ 0.34
PACS1-201ENST00000320580 CYP2R1Q6VVX0 501 aa17.18■□□□□ 0.34
PACS1-201ENST00000320580 CPXCR1Q8N123 301 aa17.18■□□□□ 0.34
PACS1-201ENST00000320580 TERB1Q8NA31 727 aa17.18■□□□□ 0.34
PACS1-201ENST00000320580 ZSWIM2Q8NEG5 633 aa17.18■□□□□ 0.34
PACS1-201ENST00000320580 FNDC8Q8TC99 324 aa17.18■□□□□ 0.34
PACS1-201ENST00000320580 PDCD6IPQ8WUM4 868 aaKnown RBP17.18■□□□□ 0.34
PACS1-201ENST00000320580 CEP19Q96LK0 163 aa17.18■□□□□ 0.34
PACS1-201ENST00000320580 IL17RBQ9NRM6 502 aa17.18■□□□□ 0.34
PACS1-201ENST00000320580 NXF1Q9UBU9 619 aaKnown RBP17.18■□□□□ 0.34
PACS1-201ENST00000320580 MINPP1Q9UNW1 487 aa17.18■□□□□ 0.34
PACS1-201ENST00000320580 FGFR2P21802 821 aa17.18■□□□□ 0.34
PACS1-201ENST00000320580 FUT4P22083 530 aa17.18■□□□□ 0.34
PACS1-201ENST00000320580 PRELPP51888 382 aa17.18■□□□□ 0.34
PACS1-201ENST00000320580 EVX2Q03828 476 aa17.18■□□□□ 0.34
PACS1-201ENST00000320580 ENOSF1Q7L5Y1 443 aa17.18■□□□□ 0.34
PACS1-201ENST00000320580 EPS8L1Q8TE68 723 aa17.18■□□□□ 0.34
PACS1-201ENST00000320580 EPB41L4BQ9H329 900 aa17.18■□□□□ 0.34
PACS1-201ENST00000320580 NWD1Q149M9 1564 aa17.18■□□□□ 0.34
PACS1-201ENST00000320580 RALBP11234 206 aa17.18■□□□□ 0.34
PACS1-201ENST00000320580 KRT76Q01546 638 aa17.18■□□□□ 0.34
PACS1-201ENST00000320580 POU5F1Q01860 360 aaKnown RBP17.18■□□□□ 0.34
PACS1-201ENST00000320580 TRAF7Q6Q0C0 670 aa17.18■□□□□ 0.34
PACS1-201ENST00000320580 TXLNGYQ9BZA5 131 aa17.18■□□□□ 0.34
PACS1-201ENST00000320580 GIN1Q9NXP7 522 aa17.18■□□□□ 0.34
PACS1-201ENST00000320580 DNAJB4Q9UDY4 337 aa17.18■□□□□ 0.34
PACS1-201ENST00000320580 CDH22Q9UJ99 828 aa17.18■□□□□ 0.34
PACS1-201ENST00000320580 PLA2G4CQ9UP65 541 aa17.18■□□□□ 0.34
PACS1-201ENST00000320580 SORCS3Q9UPU3 1222 aa17.18■□□□□ 0.34
PACS1-201ENST00000320580 SSX2IPQ9Y2D8 614 aa17.18■□□□□ 0.34
PACS1-201ENST00000320580 TRAFD1O14545 582 aaPredicted RBP17.17■□□□□ 0.34
PACS1-201ENST00000320580 ATP9BO43861 1147 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 MAP3K10Q02779 954 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 ECM1Q16610 540 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 KCNT1Q5JUK3 1230 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 TNIP2Q8NFZ5 429 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 DEPTORQ8TB45 409 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 RSPH1Q8WYR4 309 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 LXNQ9BS40 222 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 KCNMB3Q9NPA1 279 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 AJAP1Q9UKB5 411 aaPredicted RBP17.17■□□□□ 0.34
PACS1-201ENST00000320580 MYOCOSA0A1B0GUC4 107 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 ALOX15BO15296 676 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 CLOCKO15516 846 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 ASNA1O43681 348 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 SNRNP35Q16560 246 aaKnown RBP17.17■□□□□ 0.34
PACS1-201ENST00000320580 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.17■□□□□ 0.34
PACS1-201ENST00000320580 CBWD1Q9BRT8 395 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 KIFC3Q9BVG8 833 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 ARMC7Q9H6L4 198 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 IL1RL2Q9HB29 575 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 ORC6Q9Y5N6 252 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 FADS3Q9Y5Q0 445 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 PIK3R2O00459 728 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 PDGFRBP09619 1106 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 PEX6Q13608 980 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 SPOCD1Q6ZMY3 1216 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 ERI1Q8IV48 349 aaKnown RBP17.17■□□□□ 0.34
PACS1-201ENST00000320580 POLR3CQ9BUI4 534 aaPredicted RBP17.17■□□□□ 0.34
PACS1-201ENST00000320580 UBE4BO95155 1302 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 LRRIQ4A6NIV6 560 aa17.17■□□□□ 0.34
PACS1-201ENST00000320580 C16orf96A6NNT2 1141 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms