RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 NADK2Q4G0N4 442 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 PPP6R3Q5H9R7 873 aaPredicted RBP10.03□□□□□ -0.8
PTPRA-202ENST00000318266 DPY19L2Q6NUT2 758 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 B3GNT9Q6UX72 402 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 ENOSF1Q7L5Y1 443 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 STKLD1Q8NE28 680 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 GMCL1P1Q8NEA9 526 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 AGR3Q8TD06 166 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 TMC2Q8TDI7 906 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 PRPF31Q8WWY3 499 aaKnown RBP10.03□□□□□ -0.8
PTPRA-202ENST00000318266 TDRD3Q9H7E2 651 aaKnown RBP10.03□□□□□ -0.8
PTPRA-202ENST00000318266 PLLPQ9Y342 182 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 NUB1Q9Y5A7 615 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 HEMK1Q9Y5R4 338 aaPredicted RBP10.03□□□□□ -0.8
PTPRA-202ENST00000318266 NFIBO00712 420 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 ITM2AO43736 263 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 ADCY3O60266 1144 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 HNRNPCP07910 306 aaKnown RBP eCLIP10.03□□□□□ -0.8
PTPRA-202ENST00000318266 ACO1P21399 889 aaKnown RBP10.03□□□□□ -0.8
PTPRA-202ENST00000318266 KCNA4P22459 653 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 RPL10AP62906 217 aaKnown RBP10.03□□□□□ -0.8
PTPRA-202ENST00000318266 SLC18A2Q05940 514 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 STX3Q13277 289 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 ACAP1Q15027 740 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 TLR1Q15399 786 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 ACBD5Q5T8D3 534 aaPredicted RBP10.03□□□□□ -0.8
PTPRA-202ENST00000318266 KLHDC10Q6PID8 442 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 SCARA5Q6ZMJ2 495 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 SH2D5Q6ZV89 423 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 SDCCAG8Q86SQ7 713 aaPredicted RBP10.03□□□□□ -0.8
PTPRA-202ENST00000318266 LDHDQ86WU2 507 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 ZNF677Q86XU0 584 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 FAF2Q96CS3 445 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 RIT2Q99578 217 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 EHMT1Q9H9B1 1298 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 IFT122Q9HBG6 1241 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 TMOD2Q9NZR1 351 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 DNAJC16Q9Y2G8 782 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 MAD1L1Q9Y6D9 718 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 A0A0B4J269 797 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 VILLO15195 856 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 DHX15O43143 795 aaKnown RBP10.03□□□□□ -0.8
PTPRA-202ENST00000318266 KRT37O76014 449 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 TMCC1O94876 653 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 VNN1O95497 513 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 SERPINB2P05120 415 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 MMP8P22894 467 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 RFC1P35251 1148 aaPredicted RBP10.03□□□□□ -0.8
PTPRA-202ENST00000318266 GMPRP36959 345 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 COPAP53621 1224 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 MMRN1Q13201 1228 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 MTMR1Q13613 665 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 ANKRD20A4Q4UJ75 823 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 DARS2Q6PI48 645 aaKnown RBP10.03□□□□□ -0.8
PTPRA-202ENST00000318266 SLC26A11Q86WA9 606 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 NCAPG2Q86XI2 1143 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 PHF13Q86YI8 300 aaPredicted RBP10.03□□□□□ -0.8
PTPRA-202ENST00000318266 CCDC33Q8N5R6 958 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 SPATA18Q8TC71 538 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 ZBTB45Q96K62 511 aaPredicted RBP10.03□□□□□ -0.8
PTPRA-202ENST00000318266 PRPF18Q99633 342 aaKnown RBP10.03□□□□□ -0.8
PTPRA-202ENST00000318266 GPAMQ9HCL2 828 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 XAB2Q9HCS7 855 aaKnown RBP10.03□□□□□ -0.8
PTPRA-202ENST00000318266 XPNPEP1Q9NQW7 623 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 RAB6BQ9NRW1 208 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 ZNF219Q9P2Y4 722 aaPredicted RBP10.03□□□□□ -0.8
PTPRA-202ENST00000318266 SERPINA6P08185 405 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 MAPTP10636 758 aaKnown RBP10.02□□□□□ -0.81
PTPRA-202ENST00000318266 PCSK6P29122 969 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 LIG4P49917 911 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 C1QBPQ07021 282 aaKnown RBP10.02□□□□□ -0.81
PTPRA-202ENST00000318266 DPYSL3Q14195 570 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 TTC39BQ5VTQ0 682 aaPredicted RBP10.02□□□□□ -0.81
PTPRA-202ENST00000318266 TMC7Q7Z402 723 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 METTL25Q8N6Q8 603 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 DGCR14Q96DF8 476 aaKnown RBP10.02□□□□□ -0.81
PTPRA-202ENST00000318266 CLMNQ96JQ2 1002 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 CEP170P1Q96L14 293 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 PPP1R36Q96LQ0 422 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 C7orf26Q96N11 449 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 CSRNP1Q96S65 589 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 COA1Q9GZY4 146 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 USP29Q9HBJ7 922 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 SLC17A6Q9P2U8 582 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 POMPQ9Y244 141 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 LZTS1Q9Y250 596 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 DTNAQ9Y4J8 743 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 ZNF536O15090 1300 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 ADAMTSL1Q8N6G6 1762 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 PENKP01210 267 aaPredicted RBP10.02□□□□□ -0.81
PTPRA-202ENST00000318266 TFAP2AP05549 437 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 SNRPAP09012 282 aaKnown RBP10.02□□□□□ -0.81
PTPRA-202ENST00000318266 SMIM18P0DKX4 95 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 DESP17661 470 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 HPCAP84074 193 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 ORC1Q13415 861 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 HNRNPDQ14103 355 aaKnown RBP10.02□□□□□ -0.81
PTPRA-202ENST00000318266 ZACNQ401N2 412 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 GPAT2Q6NUI2 795 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 TRMT10BQ6PF06 316 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms