RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 GTF2A2P52657 109 aa21.49■■□□□ 1.03
TTC39C-202ENST00000317571 DNAJC3Q13217 504 aa21.49■■□□□ 1.03
TTC39C-202ENST00000317571 CYB5D1Q6P9G0 228 aa21.49■■□□□ 1.03
TTC39C-202ENST00000317571 ANKRD23Q86SG2 305 aa21.49■■□□□ 1.03
TTC39C-202ENST00000317571 TTC39CQ8N584 583 aa21.49■■□□□ 1.03
TTC39C-202ENST00000317571 FITM2Q8N6M3 262 aa21.49■■□□□ 1.03
TTC39C-202ENST00000317571 C12orf65Q9H3J6 166 aaKnown RBP21.49■■□□□ 1.03
TTC39C-202ENST00000317571 DERAQ9Y315 318 aa21.49■■□□□ 1.03
TTC39C-202ENST00000317571 SCN4AP35499 1836 aa21.48■■□□□ 1.03
TTC39C-202ENST00000317571 SUN1O94901 812 aa21.48■■□□□ 1.03
TTC39C-202ENST00000317571 LMO2P25791 158 aa21.48■■□□□ 1.03
TTC39C-202ENST00000317571 IL9RQ01113 521 aa21.48■■□□□ 1.03
TTC39C-202ENST00000317571 KRT81Q14533 505 aa21.48■■□□□ 1.03
TTC39C-202ENST00000317571 STILQ15468 1287 aa21.48■■□□□ 1.03
TTC39C-202ENST00000317571 ADGRD1Q6QNK2 874 aa21.48■■□□□ 1.03
TTC39C-202ENST00000317571 OR6B3Q8NGW1 331 aa21.48■■□□□ 1.03
TTC39C-202ENST00000317571 SMC6Q96SB8 1091 aa21.48■■□□□ 1.03
TTC39C-202ENST00000317571 GCOM2Q9BZD3 368 aaPredicted RBP21.48■■□□□ 1.03
TTC39C-202ENST00000317571 RNF39Q9H2S5 420 aa21.48■■□□□ 1.03
TTC39C-202ENST00000317571 KLK14Q9P0G3 267 aa21.48■■□□□ 1.03
TTC39C-202ENST00000317571 CNTN3Q9P232 1028 aa21.48■■□□□ 1.03
TTC39C-202ENST00000317571 CENPFP49454 3210 aa21.48■■□□□ 1.03
TTC39C-202ENST00000317571 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.48■■□□□ 1.03
TTC39C-202ENST00000317571 H7C0C1 242 aa21.48■■□□□ 1.03
TTC39C-202ENST00000317571 DYNC1LI2O43237 492 aaPredicted RBP21.48■■□□□ 1.03
TTC39C-202ENST00000317571 GSTA1P08263 222 aa21.48■■□□□ 1.03
TTC39C-202ENST00000317571 RBL1P28749 1068 aa21.48■■□□□ 1.03
TTC39C-202ENST00000317571 ATP5OP48047 213 aa21.48■■□□□ 1.03
TTC39C-202ENST00000317571 SLC18A1P54219 525 aa21.48■■□□□ 1.03
TTC39C-202ENST00000317571 RNASELQ05823 741 aaKnown RBP21.48■■□□□ 1.03
TTC39C-202ENST00000317571 FAXCQ5TGI0 409 aa21.48■■□□□ 1.03
TTC39C-202ENST00000317571 SLC9A4Q6AI14 798 aa21.48■■□□□ 1.03
TTC39C-202ENST00000317571 THOC1Q96FV9 657 aaKnown RBP21.48■■□□□ 1.03
TTC39C-202ENST00000317571 GOLGA2P5Q9HBQ8 144 aa21.48■■□□□ 1.03
TTC39C-202ENST00000317571 SLC5A4Q9NY91 659 aa21.48■■□□□ 1.03
TTC39C-202ENST00000317571 ARL2BPQ9Y2Y0 163 aa21.48■■□□□ 1.03
TTC39C-202ENST00000317571 HEY1Q9Y5J3 304 aa21.48■■□□□ 1.03
TTC39C-202ENST00000317571 F2P00734 622 aa21.47■■□□□ 1.03
TTC39C-202ENST00000317571 DARSP14868 501 aaKnown RBP21.47■■□□□ 1.03
TTC39C-202ENST00000317571 KRT4P19013 534 aa21.47■■□□□ 1.03
TTC39C-202ENST00000317571 CA4P22748 312 aa21.47■■□□□ 1.03
TTC39C-202ENST00000317571 SDC4P31431 198 aa21.47■■□□□ 1.03
TTC39C-202ENST00000317571 NCALDP61601 193 aa21.47■■□□□ 1.03
TTC39C-202ENST00000317571 TFDP2Q14188 446 aa21.47■■□□□ 1.03
TTC39C-202ENST00000317571 ECHDC2Q86YB7 292 aa21.47■■□□□ 1.03
TTC39C-202ENST00000317571 PDIK1LQ8N165 341 aa21.47■■□□□ 1.03
TTC39C-202ENST00000317571 LRRC52Q8N7C0 313 aa21.47■■□□□ 1.03
TTC39C-202ENST00000317571 C7orf31Q8N865 590 aa21.47■■□□□ 1.03
TTC39C-202ENST00000317571 C11orf84Q9BUA3 381 aaPredicted RBP21.47■■□□□ 1.03
TTC39C-202ENST00000317571 PDGFRBP09619 1106 aa21.47■■□□□ 1.03
TTC39C-202ENST00000317571 STIP1P31948 543 aaKnown RBP21.47■■□□□ 1.03
TTC39C-202ENST00000317571 YARSP54577 528 aaKnown RBP21.47■■□□□ 1.03
TTC39C-202ENST00000317571 SOX4Q06945 474 aaPredicted RBP21.47■■□□□ 1.03
TTC39C-202ENST00000317571 FAM47CQ5HY64 1035 aa21.47■■□□□ 1.03
TTC39C-202ENST00000317571 IQSEC1Q6DN90 963 aa21.47■■□□□ 1.03
TTC39C-202ENST00000317571 PLEKHH3Q7Z736 793 aa21.47■■□□□ 1.03
TTC39C-202ENST00000317571 FAM228AQ86W67 206 aa21.47■■□□□ 1.03
TTC39C-202ENST00000317571 PARP9Q8IXQ6 854 aa21.47■■□□□ 1.03
TTC39C-202ENST00000317571 KLF6Q99612 283 aaPredicted RBP21.47■■□□□ 1.03
TTC39C-202ENST00000317571 SENP1Q9P0U3 644 aa21.47■■□□□ 1.03
TTC39C-202ENST00000317571 FETUBQ9UGM5 382 aa21.47■■□□□ 1.03
TTC39C-202ENST00000317571 SMG5Q9UPR3 1016 aaKnown RBP21.47■■□□□ 1.03
TTC39C-202ENST00000317571 TEX264Q9Y6I9 313 aa21.47■■□□□ 1.03
TTC39C-202ENST00000317571 MBLAC1A4D2B0 266 aaPredicted RBP21.46■■□□□ 1.03
TTC39C-202ENST00000317571 A6NJR5 290 aa21.46■■□□□ 1.03
TTC39C-202ENST00000317571 KBTBD13C9JR72 458 aa21.46■■□□□ 1.03
TTC39C-202ENST00000317571 HGSO14964 777 aaPredicted RBP21.46■■□□□ 1.03
TTC39C-202ENST00000317571 CHUKO15111 745 aa21.46■■□□□ 1.03
TTC39C-202ENST00000317571 KCNN4O15554 427 aa21.46■■□□□ 1.03
TTC39C-202ENST00000317571 C1QAP02745 245 aa21.46■■□□□ 1.03
TTC39C-202ENST00000317571 ADORA2BP29275 332 aa21.46■■□□□ 1.03
TTC39C-202ENST00000317571 ZNF200P98182 395 aaPredicted RBP21.46■■□□□ 1.03
TTC39C-202ENST00000317571 BOLA3Q53S33 107 aa21.46■■□□□ 1.03
TTC39C-202ENST00000317571 ARHGAP17Q68EM7 881 aa21.46■■□□□ 1.03
TTC39C-202ENST00000317571 NOTUMQ6P988 496 aa21.46■■□□□ 1.03
TTC39C-202ENST00000317571 BEST2Q8NFU1 509 aa21.46■■□□□ 1.03
TTC39C-202ENST00000317571 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.46■■□□□ 1.03
TTC39C-202ENST00000317571 TEKT4Q8WW24 435 aa21.46■■□□□ 1.03
TTC39C-202ENST00000317571 PLAC1Q9HBJ0 212 aa21.46■■□□□ 1.03
TTC39C-202ENST00000317571 FLRT1Q9NZU1 646 aa21.46■■□□□ 1.03
TTC39C-202ENST00000317571 GNEQ9Y223 722 aaKnown RBP21.46■■□□□ 1.03
TTC39C-202ENST00000317571 A8MXQ7 604 aa21.46■■□□□ 1.03
TTC39C-202ENST00000317571 PIRO00625 290 aa21.46■■□□□ 1.03
TTC39C-202ENST00000317571 SETSIPP0DME0 302 aa21.46■■□□□ 1.03
TTC39C-202ENST00000317571 CYP2C9P11712 490 aa21.46■■□□□ 1.03
TTC39C-202ENST00000317571 PHBP35232 272 aa21.46■■□□□ 1.03
TTC39C-202ENST00000317571 SPARCL1Q14515 664 aa21.46■■□□□ 1.03
TTC39C-202ENST00000317571 PDK2Q15119 407 aa21.46■■□□□ 1.03
TTC39C-202ENST00000317571 SESTD1Q86VW0 696 aa21.46■■□□□ 1.03
TTC39C-202ENST00000317571 PALM2Q8IXS6 379 aa21.46■■□□□ 1.03
TTC39C-202ENST00000317571 CCDC33Q8N5R6 958 aa21.46■■□□□ 1.03
TTC39C-202ENST00000317571 DNAJB3Q8WWF6 145 aa21.46■■□□□ 1.03
TTC39C-202ENST00000317571 USP6NLQ92738 828 aa21.46■■□□□ 1.03
TTC39C-202ENST00000317571 FAF2Q96CS3 445 aa21.46■■□□□ 1.03
TTC39C-202ENST00000317571 RTP4Q96DX8 246 aa21.46■■□□□ 1.03
TTC39C-202ENST00000317571 PITPNM3Q9BZ71 974 aa21.46■■□□□ 1.03
TTC39C-202ENST00000317571 PPCSQ9HAB8 311 aa21.46■■□□□ 1.03
TTC39C-202ENST00000317571 CLEC11AQ9Y240 323 aa21.46■■□□□ 1.03
TTC39C-202ENST00000317571 TCRBV9S1A1TA0A576 114 aa21.45■■□□□ 1.02
TTC39C-202ENST00000317571 RRN3P2A6NIE6 340 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms