RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.97□□□□□ -0.33
RNF4-201ENST00000314289 ARHGEF2Q92974 986 aaKnown RBP12.97□□□□□ -0.33
RNF4-201ENST00000314289 NKD2Q969F2 451 aaPredicted RBP12.97□□□□□ -0.33
RNF4-201ENST00000314289 AGO3Q9H9G7 860 aaKnown RBP12.97□□□□□ -0.33
RNF4-201ENST00000314289 VPS37BQ9H9H4 285 aa12.97□□□□□ -0.33
RNF4-201ENST00000314289 CHRNA1P02708 482 aa12.96□□□□□ -0.33
RNF4-201ENST00000314289 ITGAVP06756 1048 aa12.96□□□□□ -0.33
RNF4-201ENST00000314289 SLC10A3P09131 477 aa12.96□□□□□ -0.33
RNF4-201ENST00000314289 RPL22P35268 128 aaKnown RBP12.96□□□□□ -0.33
RNF4-201ENST00000314289 HDAC4P56524 1084 aa12.96□□□□□ -0.33
RNF4-201ENST00000314289 LMNB2Q03252 620 aa12.96□□□□□ -0.33
RNF4-201ENST00000314289 MSS51Q4VC12 460 aa12.96□□□□□ -0.33
RNF4-201ENST00000314289 DARS2Q6PI48 645 aaKnown RBP12.96□□□□□ -0.33
RNF4-201ENST00000314289 PRMT1Q99873 361 aaKnown RBP12.96□□□□□ -0.33
RNF4-201ENST00000314289 SNRNP25Q9BV90 132 aaKnown RBP12.96□□□□□ -0.33
RNF4-201ENST00000314289 KATNAL1Q9BW62 490 aa12.96□□□□□ -0.33
RNF4-201ENST00000314289 SLC4A5Q9BY07 1137 aa12.96□□□□□ -0.33
RNF4-201ENST00000314289 KCNK9Q9NPC2 374 aa12.96□□□□□ -0.33
RNF4-201ENST00000314289 KIAA1257Q9ULG3 409 aa12.96□□□□□ -0.33
RNF4-201ENST00000314289 DERAQ9Y315 318 aa12.96□□□□□ -0.33
RNF4-201ENST00000314289 FAM155AB1AL88 458 aaPredicted RBP12.96□□□□□ -0.34
RNF4-201ENST00000314289 H7C0C1 242 aa12.96□□□□□ -0.34
RNF4-201ENST00000314289 CD4P01730 458 aa12.96□□□□□ -0.34
RNF4-201ENST00000314289 EZRP15311 586 aaKnown RBP12.96□□□□□ -0.34
RNF4-201ENST00000314289 ATP5OP48047 213 aa12.96□□□□□ -0.34
RNF4-201ENST00000314289 RNASEH2BQ5TBB1 312 aaKnown RBP12.96□□□□□ -0.34
RNF4-201ENST00000314289 TMEM110Q86TL2 294 aa12.96□□□□□ -0.34
RNF4-201ENST00000314289 PYROXD2Q8N2H3 581 aa12.96□□□□□ -0.34
RNF4-201ENST00000314289 ZCCHC9Q8N567 271 aaKnown RBP12.96□□□□□ -0.34
RNF4-201ENST00000314289 SOCS4Q8WXH5 440 aa12.96□□□□□ -0.34
RNF4-201ENST00000314289 FAXDC2Q96IV6 333 aa12.96□□□□□ -0.34
RNF4-201ENST00000314289 BAIAP2L1Q9UHR4 511 aa12.96□□□□□ -0.34
RNF4-201ENST00000314289 CYB561D2O14569 222 aa12.95□□□□□ -0.34
RNF4-201ENST00000314289 IL4RP24394 825 aa12.95□□□□□ -0.34
RNF4-201ENST00000314289 CCND3P30281 292 aaPredicted RBP12.95□□□□□ -0.34
RNF4-201ENST00000314289 CLCNKBP51801 687 aa12.95□□□□□ -0.34
RNF4-201ENST00000314289 FNBP1LQ5T0N5 605 aa12.95□□□□□ -0.34
RNF4-201ENST00000314289 KIAA0319Q5VV43 1072 aa12.95□□□□□ -0.34
RNF4-201ENST00000314289 SRRM1Q8IYB3 904 aaKnown RBP12.95□□□□□ -0.34
RNF4-201ENST00000314289 C3orf58Q8NDZ4 430 aa12.95□□□□□ -0.34
RNF4-201ENST00000314289 P3H4Q92791 437 aa12.95□□□□□ -0.34
RNF4-201ENST00000314289 DHX35Q9H5Z1 703 aaKnown RBP12.95□□□□□ -0.34
RNF4-201ENST00000314289 DRG1Q9Y295 367 aaKnown RBP12.95□□□□□ -0.34
RNF4-201ENST00000314289 MFHAS1Q9Y4C4 1052 aa12.95□□□□□ -0.34
RNF4-201ENST00000314289 MYO18AQ92614 2054 aaKnown RBP12.95□□□□□ -0.34
RNF4-201ENST00000314289 M0QZ92 97 aa12.95□□□□□ -0.34
RNF4-201ENST00000314289 MCF2LO15068 1137 aa12.95□□□□□ -0.34
RNF4-201ENST00000314289 DUSP11O75319 330 aaKnown RBP12.95□□□□□ -0.34
RNF4-201ENST00000314289 GHRP10912 638 aa12.95□□□□□ -0.34
RNF4-201ENST00000314289 GNAT1P11488 350 aa12.95□□□□□ -0.34
RNF4-201ENST00000314289 THPOP40225 353 aa12.95□□□□□ -0.34
RNF4-201ENST00000314289 PSEN1P49768 467 aa12.95□□□□□ -0.34
RNF4-201ENST00000314289 SCNN1GP51170 649 aa12.95□□□□□ -0.34
RNF4-201ENST00000314289 MRPS6P82932 125 aaKnown RBP12.95□□□□□ -0.34
RNF4-201ENST00000314289 CAV1Q03135 178 aa12.95□□□□□ -0.34
RNF4-201ENST00000314289 ADIGQ0VDE8 80 aa12.95□□□□□ -0.34
RNF4-201ENST00000314289 TMED2Q15363 201 aa12.95□□□□□ -0.34
RNF4-201ENST00000314289 PIGZQ86VD9 579 aa12.95□□□□□ -0.34
RNF4-201ENST00000314289 FAM131BQ86XD5 332 aa12.95□□□□□ -0.34
RNF4-201ENST00000314289 GSTCDQ8NEC7 633 aa12.95□□□□□ -0.34
RNF4-201ENST00000314289 CPT1BQ92523 772 aa12.95□□□□□ -0.34
RNF4-201ENST00000314289 RHOBTB2Q9BYZ6 727 aa12.95□□□□□ -0.34
RNF4-201ENST00000314289 GTF2IRD1Q9UHL9 959 aa12.95□□□□□ -0.34
RNF4-201ENST00000314289 SRRM3A6NNA2 597 aaPredicted RBP12.94□□□□□ -0.34
RNF4-201ENST00000314289 APOC4-APOC2K7ER74 178 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 AVILO75366 819 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 TMEM63AO94886 807 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 POMCP01189 267 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 APOC2P02655 101 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 AXLP30530 894 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 SSTR1P30872 391 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 PCK1P35558 622 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 MMP13P45452 471 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 BST2Q10589 180 aaKnown RBP12.94□□□□□ -0.34
RNF4-201ENST00000314289 EFTUD2Q15029 972 aaKnown RBP eCLIP12.94□□□□□ -0.348e-8■■■□□ 18.1
RNF4-201ENST00000314289 MDH1BQ5I0G3 518 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 DRICH1Q6PGQ1 229 aaPredicted RBP12.94□□□□□ -0.34
RNF4-201ENST00000314289 CCDC185Q8N715 623 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 ANKRD52Q8NB46 1076 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 B3GALNT2Q8NCR0 500 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 GDAP1Q8TB36 358 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 ADAM32Q8TC27 787 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 PRCCQ92733 491 aaPredicted RBP12.94□□□□□ -0.34
RNF4-201ENST00000314289 ZNF560Q96MR9 790 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 MED10Q9BTT4 135 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 KIF9Q9HAQ2 790 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 PCDH9Q9HC56 1237 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 FAM105AQ9NUU6 356 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 NAALADL1Q9UQQ1 740 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 AGTP01019 485 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 ASGR1P07306 291 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 CD52P31358 61 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 PTPN7P35236 360 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 CLNS1AP54105 237 aaKnown RBP12.94□□□□□ -0.34
RNF4-201ENST00000314289 MAP3K7CLP57077 242 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 BBOF1Q8ND07 529 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 PCDH19Q8TAB3 1148 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 KCNK16Q96T55 309 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 TSPYL2Q9H2G4 693 aaPredicted RBP12.94□□□□□ -0.34
RNF4-201ENST00000314289 RSAD1Q9HA92 442 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms