RNA–Protein interactions for RNA: ENST00000313663.11

C2CD3-201, Transcript of C2 calcium dependent domain containing 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C2CD3, Length 6,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-201ENST00000313663 DDX4Q9NQI0 724 aaKnown RBP9.21□□□□□ -0.93
C2CD3-201ENST00000313663 KCNQ5Q9NR82 932 aa9.21□□□□□ -0.93
C2CD3-201ENST00000313663 DUX4Q9UBX2 424 aa9.21□□□□□ -0.93
C2CD3-201ENST00000313663 TBX20Q9UMR3 447 aa9.21□□□□□ -0.93
C2CD3-201ENST00000313663 LZTS1Q9Y250 596 aa9.21□□□□□ -0.93
C2CD3-201ENST00000313663 NRXN2Q9P2S2 1712 aa9.21□□□□□ -0.93
C2CD3-201ENST00000313663 ZW10O43264 779 aa9.21□□□□□ -0.93
C2CD3-201ENST00000313663 SEC24DO94855 1032 aaPredicted RBP9.21□□□□□ -0.93
C2CD3-201ENST00000313663 KRT20P35900 424 aa9.21□□□□□ -0.93
C2CD3-201ENST00000313663 PCYT1AP49585 367 aa9.21□□□□□ -0.93
C2CD3-201ENST00000313663 KPNA1P52294 538 aaPredicted RBP9.21□□□□□ -0.93
C2CD3-201ENST00000313663 FKBP1AP62942 108 aaKnown RBP9.21□□□□□ -0.93
C2CD3-201ENST00000313663 SMTNL2Q2TAL5 461 aa9.21□□□□□ -0.93
C2CD3-201ENST00000313663 TIGD7Q6NT04 549 aaPredicted RBP9.21□□□□□ -0.93
C2CD3-201ENST00000313663 C1orf131Q8NDD1 294 aaKnown RBP9.21□□□□□ -0.93
C2CD3-201ENST00000313663 VMP1Q96GC9 406 aa9.21□□□□□ -0.93
C2CD3-201ENST00000313663 ZDHHC15Q96MV8 337 aa9.21□□□□□ -0.93
C2CD3-201ENST00000313663 THG1LQ9NWX6 298 aaKnown RBP9.21□□□□□ -0.93
C2CD3-201ENST00000313663 SCN3BQ9NY72 215 aa9.21□□□□□ -0.93
C2CD3-201ENST00000313663 TUBGCP4Q9UGJ1 667 aa9.21□□□□□ -0.93
C2CD3-201ENST00000313663 MANSC4A6NHS7 340 aaPredicted RBP9.21□□□□□ -0.93
C2CD3-201ENST00000313663 SNTNA6NMZ2 147 aa9.21□□□□□ -0.93
C2CD3-201ENST00000313663 IFRD1O00458 451 aaPredicted RBP9.21□□□□□ -0.93
C2CD3-201ENST00000313663 NKRFO15226 690 aaKnown RBP eCLIP9.21□□□□□ -0.93
C2CD3-201ENST00000313663 TBC1D4O60343 1298 aa9.21□□□□□ -0.93
C2CD3-201ENST00000313663 BRD2P25440 801 aaKnown RBP9.21□□□□□ -0.93
C2CD3-201ENST00000313663 MAGEA4P43358 317 aa9.21□□□□□ -0.93
C2CD3-201ENST00000313663 NAMPTP43490 491 aa9.21□□□□□ -0.93
C2CD3-201ENST00000313663 LHX1P48742 406 aa9.21□□□□□ -0.93
C2CD3-201ENST00000313663 CARSP49589 748 aaKnown RBP9.21□□□□□ -0.93
C2CD3-201ENST00000313663 TOB1P50616 345 aaPredicted RBP9.21□□□□□ -0.93
C2CD3-201ENST00000313663 RAD23BP54727 409 aa9.21□□□□□ -0.93
C2CD3-201ENST00000313663 ACER1Q8TDN7 264 aa9.21□□□□□ -0.93
C2CD3-201ENST00000313663 SLC20A1Q8WUM9 679 aa9.21□□□□□ -0.93
C2CD3-201ENST00000313663 FAM162AQ96A26 154 aa9.21□□□□□ -0.93
C2CD3-201ENST00000313663 WNK4Q96J92 1243 aa9.21□□□□□ -0.93
C2CD3-201ENST00000313663 MAGEB10Q96LZ2 347 aaPredicted RBP9.21□□□□□ -0.93
C2CD3-201ENST00000313663 CHP1Q99653 195 aa9.21□□□□□ -0.93
C2CD3-201ENST00000313663 MRIQ9BWK5 157 aa9.21□□□□□ -0.93
C2CD3-201ENST00000313663 CARD9Q9H257 536 aa9.21□□□□□ -0.93
C2CD3-201ENST00000313663 HPS4Q9NQG7 708 aa9.21□□□□□ -0.93
C2CD3-201ENST00000313663 CPA4Q9UI42 421 aa9.21□□□□□ -0.93
C2CD3-201ENST00000313663 EIF3LQ9Y262 564 aaKnown RBP9.21□□□□□ -0.93
C2CD3-201ENST00000313663 TCP11X1B4DZS4 312 aa9.21□□□□□ -0.94
C2CD3-201ENST00000313663 AIM2O14862 343 aa9.21□□□□□ -0.94
C2CD3-201ENST00000313663 HMGB3O15347 200 aaKnown RBP9.21□□□□□ -0.94
C2CD3-201ENST00000313663 ENO1P06733 434 aaKnown RBP9.21□□□□□ -0.94
C2CD3-201ENST00000313663 EFEMP1Q12805 493 aa9.21□□□□□ -0.94
C2CD3-201ENST00000313663 CUL2Q13617 745 aa9.21□□□□□ -0.94
C2CD3-201ENST00000313663 ACOT1Q86TX2 421 aa9.21□□□□□ -0.94
C2CD3-201ENST00000313663 HORMAD1Q86X24 394 aa9.21□□□□□ -0.94
C2CD3-201ENST00000313663 TFB1MQ8WVM0 346 aaKnown RBP9.21□□□□□ -0.94
C2CD3-201ENST00000313663 TUBGCP3Q96CW5 907 aa9.21□□□□□ -0.94
C2CD3-201ENST00000313663 PRMT6Q96LA8 375 aaPredicted RBP9.21□□□□□ -0.94
C2CD3-201ENST00000313663 PI4K2AQ9BTU6 479 aa9.21□□□□□ -0.94
C2CD3-201ENST00000313663 SYBUQ9NX95 663 aa9.21□□□□□ -0.94
C2CD3-201ENST00000313663 VCAM1P19320 739 aa9.21□□□□□ -0.94
C2CD3-201ENST00000313663 WEE1P30291 646 aa9.21□□□□□ -0.94
C2CD3-201ENST00000313663 FXR2P51116 673 aaKnown RBP eCLIP9.21□□□□□ -0.94
C2CD3-201ENST00000313663 GYS2P54840 703 aa9.21□□□□□ -0.94
C2CD3-201ENST00000313663 PWP1Q13610 501 aa9.21□□□□□ -0.94
C2CD3-201ENST00000313663 MPZL3Q6UWV2 235 aa9.21□□□□□ -0.94
C2CD3-201ENST00000313663 MYO1HQ8N1T3 1032 aa9.21□□□□□ -0.94
C2CD3-201ENST00000313663 C7orf43Q8WVR3 580 aa9.21□□□□□ -0.94
C2CD3-201ENST00000313663 CCDC126Q96EE4 140 aa9.21□□□□□ -0.94
C2CD3-201ENST00000313663 METTL5Q9NRN9 209 aaKnown RBP9.21□□□□□ -0.94
C2CD3-201ENST00000313663 AGPAT3Q9NRZ7 376 aa9.21□□□□□ -0.94
C2CD3-201ENST00000313663 FBXO10Q9UK96 956 aa9.21□□□□□ -0.94
C2CD3-201ENST00000313663 CDYLQ9Y232 598 aa9.21□□□□□ -0.94
C2CD3-201ENST00000313663 BAZ2BQ9UIF8 2168 aaKnown RBP9.2□□□□□ -0.94
C2CD3-201ENST00000313663 PSMD12O00232 456 aaPredicted RBP9.2□□□□□ -0.94
C2CD3-201ENST00000313663 PCDH8O95206 1070 aa9.2□□□□□ -0.94
C2CD3-201ENST00000313663 TGFB3P10600 412 aa9.2□□□□□ -0.94
C2CD3-201ENST00000313663 DNAJB2P25686 324 aa9.2□□□□□ -0.94
C2CD3-201ENST00000313663 NFIAQ12857 509 aa9.2□□□□□ -0.94
C2CD3-201ENST00000313663 DPYDQ12882 1025 aa9.2□□□□□ -0.94
C2CD3-201ENST00000313663 EPC2Q52LR7 807 aa9.2□□□□□ -0.94
C2CD3-201ENST00000313663 USP39Q53GS9 565 aaKnown RBP9.2□□□□□ -0.94
C2CD3-201ENST00000313663 DEFB128Q7Z7B8 93 aa9.2□□□□□ -0.94
C2CD3-201ENST00000313663 JAMLQ86YT9 394 aa9.2□□□□□ -0.94
C2CD3-201ENST00000313663 SLC44A2Q8IWA5 706 aaPredicted RBP9.2□□□□□ -0.94
C2CD3-201ENST00000313663 TNIP2Q8NFZ5 429 aa9.2□□□□□ -0.94
C2CD3-201ENST00000313663 ZCCHC2Q9C0B9 1178 aaKnown RBP9.2□□□□□ -0.94
C2CD3-201ENST00000313663 PDGFDQ9GZP0 370 aaPredicted RBP9.2□□□□□ -0.94
C2CD3-201ENST00000313663 PALMDQ9NP74 551 aa9.2□□□□□ -0.94
C2CD3-201ENST00000313663 ZNF229Q9UJW7 825 aa9.2□□□□□ -0.94
C2CD3-201ENST00000313663 SOX13Q9UN79 622 aa9.2□□□□□ -0.94
C2CD3-201ENST00000313663 A0A1B0GTH6 734 aa9.2□□□□□ -0.94
C2CD3-201ENST00000313663 ENDOD1O94919 500 aa9.2□□□□□ -0.94
C2CD3-201ENST00000313663 MYL4P12829 197 aa9.2□□□□□ -0.94
C2CD3-201ENST00000313663 SKP1P63208 163 aa9.2□□□□□ -0.94
C2CD3-201ENST00000313663 MRPS15P82914 257 aaKnown RBP9.2□□□□□ -0.94
C2CD3-201ENST00000313663 CENPCQ03188 943 aa9.2□□□□□ -0.94
C2CD3-201ENST00000313663 ZNF544Q6NX49 715 aa9.2□□□□□ -0.94
C2CD3-201ENST00000313663 C16orf89Q6UX73 402 aa9.2□□□□□ -0.94
C2CD3-201ENST00000313663 PLD3Q8IV08 490 aa9.2□□□□□ -0.94
C2CD3-201ENST00000313663 TMCC3Q9ULS5 477 aa9.2□□□□□ -0.94
C2CD3-201ENST00000313663 LOC100653049A0A140TA62 436 aa9.2□□□□□ -0.94
C2CD3-201ENST00000313663 CXCL11O14625 94 aa9.2□□□□□ -0.94
C2CD3-201ENST00000313663 TIMM44O43615 452 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms