RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 PLTPP55058 493 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 PTK6Q13882 451 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 TRIM60Q495X7 471 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 ERMARDQ5T6L9 678 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 NDRG1Q92597 394 aaKnown RBP17.47■□□□□ 0.39
CLCF1-201ENST00000312438 FMO2Q99518 471 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 COLEC11Q9BWP8 271 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 POPDC2Q9HBU9 364 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 TMLHEQ9NVH6 421 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 GRHL1Q9NZI5 618 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 DNAH12Q6ZR08 3092 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.47■□□□□ 0.39
CLCF1-201ENST00000312438 HHLA1C9JL84 531 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 NRP1O14786 923 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 SYN3O14994 580 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 TFE3P19532 575 aaPredicted RBP17.47■□□□□ 0.39
CLCF1-201ENST00000312438 ITIH2P19823 946 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 BDNFP23560 247 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 CACNA2D1P54289 1103 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 CBX1P83916 185 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 KRT81Q14533 505 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 TCTN1Q2MV58 587 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 DCAF6Q58WW2 860 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 C4orf50Q6ZRC1 276 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 ZNF365Q70YC5 407 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 CTU1Q7Z7A3 348 aaKnown RBP17.47■□□□□ 0.39
CLCF1-201ENST00000312438 RFX6Q8HWS3 928 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 NPAS4Q8IUM7 802 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 CCDC89Q8N998 374 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 TSEN2Q8NCE0 465 aaKnown RBP17.47■□□□□ 0.39
CLCF1-201ENST00000312438 NKD2Q969F2 451 aaPredicted RBP17.47■□□□□ 0.39
CLCF1-201ENST00000312438 NT5C3BQ969T7 300 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 SLC2A13Q96QE2 648 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 TMEM209Q96SK2 561 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 FAM118BQ9BPY3 351 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 MRPL9Q9BYD2 267 aaKnown RBP17.47■□□□□ 0.39
CLCF1-201ENST00000312438 PPP1R12CQ9BZL4 782 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 ULBP1Q9BZM6 244 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 PNPLA8Q9NP80 782 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 DMAP1Q9NPF5 467 aaPredicted RBP17.47■□□□□ 0.39
CLCF1-201ENST00000312438 TMEM30AQ9NV96 361 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 DNPEPQ9ULA0 475 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 STAP1Q9ULZ2 295 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 ZNF148Q9UQR1 794 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 NEU2Q9Y3R4 380 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 GOLGA6BA6NDN3 693 aa17.46■□□□□ 0.39
CLCF1-201ENST00000312438 DAOAP59103 153 aa17.46■□□□□ 0.39
CLCF1-201ENST00000312438 CALCOCO2Q13137 446 aa17.46■□□□□ 0.39
CLCF1-201ENST00000312438 TFDP2Q14188 446 aa17.46■□□□□ 0.39
CLCF1-201ENST00000312438 HSP90B2PQ58FF3 399 aa17.46■□□□□ 0.39
CLCF1-201ENST00000312438 FBXO46Q6PJ61 603 aaPredicted RBP17.46■□□□□ 0.39
CLCF1-201ENST00000312438 ZDHHC24Q6UX98 284 aa17.46■□□□□ 0.39
CLCF1-201ENST00000312438 GSTA5Q7RTV2 222 aa17.46■□□□□ 0.39
CLCF1-201ENST00000312438 SPATA2LQ8IUW3 424 aaPredicted RBP17.46■□□□□ 0.39
CLCF1-201ENST00000312438 DCP1BQ8IZD4 617 aaKnown RBP17.46■□□□□ 0.39
CLCF1-201ENST00000312438 CCHCR1Q8TD31 782 aa17.46■□□□□ 0.39
CLCF1-201ENST00000312438 ART4Q93070 314 aa17.46■□□□□ 0.39
CLCF1-201ENST00000312438 SNRNP25Q9BV90 132 aaKnown RBP17.46■□□□□ 0.39
CLCF1-201ENST00000312438 MED4Q9NPJ6 270 aa17.46■□□□□ 0.39
CLCF1-201ENST00000312438 WHRNQ9P202 907 aa17.46■□□□□ 0.39
CLCF1-201ENST00000312438 ASIC3Q9UHC3 531 aa17.46■□□□□ 0.39
CLCF1-201ENST00000312438 ADAM28Q9UKQ2 775 aa17.46■□□□□ 0.39
CLCF1-201ENST00000312438 FAN1Q9Y2M0 1017 aa17.46■□□□□ 0.39
CLCF1-201ENST00000312438 ZBED1O96006 694 aa17.45■□□□□ 0.38
CLCF1-201ENST00000312438 ITGAVP06756 1048 aa17.45■□□□□ 0.38
CLCF1-201ENST00000312438 CYP2C18P33260 490 aa17.45■□□□□ 0.38
CLCF1-201ENST00000312438 VCPP55072 806 aaKnown RBP17.45■□□□□ 0.38
CLCF1-201ENST00000312438 DYNLT1P63172 113 aa17.45■□□□□ 0.38
CLCF1-201ENST00000312438 DPYSL3Q14195 570 aa17.45■□□□□ 0.38
CLCF1-201ENST00000312438 SCML4Q8N228 414 aa17.45■□□□□ 0.38
CLCF1-201ENST00000312438 SLC35B2Q8TB61 432 aa17.45■□□□□ 0.38
CLCF1-201ENST00000312438 FAM71BQ8TC56 605 aa17.45■□□□□ 0.38
CLCF1-201ENST00000312438 FBXO25Q8TCJ0 367 aa17.45■□□□□ 0.38
CLCF1-201ENST00000312438 RNF157Q96PX1 679 aa17.45■□□□□ 0.38
CLCF1-201ENST00000312438 NPY6RQ99463 290 aa17.45■□□□□ 0.38
CLCF1-201ENST00000312438 MTRF1LQ9UGC7 380 aaKnown RBP17.45■□□□□ 0.38
CLCF1-201ENST00000312438 ZNF487B1APH4 448 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 APOC4-APOC2K7ER74 178 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 CAPN9O14815 690 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 APOC2P02655 101 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 USP17L7P0C7H9 530 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 IL4RP24394 825 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 ADCY8P40145 1251 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 SULT1E1P49888 294 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 RABGGTBP53611 331 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 OASLQ15646 514 aaKnown RBP17.44■□□□□ 0.38
CLCF1-201ENST00000312438 ZC3H12AQ5D1E8 599 aaKnown RBP17.44■□□□□ 0.38
CLCF1-201ENST00000312438 CFAP58Q5T655 872 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 PM20D1Q6GTS8 502 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 GPRIN1Q7Z2K8 1008 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 DEFB128Q7Z7B8 93 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 IQCKQ8N0W5 287 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 BBOF1Q8ND07 529 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 ACTL9Q8TC94 416 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 IRGQQ8WZA9 623 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 TMEM175Q9BSA9 504 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 RHOBTB2Q9BYZ6 727 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 ADAM33Q9BZ11 813 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 ZCWPW1Q9H0M4 648 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 YJEFN3A6XGL0 299 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms