RNA–Protein interactions for RNA: ENST00000308588.9

SNUPN-201, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNUPN, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-201ENST00000308588 SLC44A3Q8N4M1 653 aa23.24■■□□□ 1.31
SNUPN-201ENST00000308588 CPLX3Q8WVH0 158 aa23.24■■□□□ 1.31
SNUPN-201ENST00000308588 USP13Q92995 863 aaPredicted RBP23.24■■□□□ 1.31
SNUPN-201ENST00000308588 ELSPBP1Q96BH3 223 aa23.24■■□□□ 1.31
SNUPN-201ENST00000308588 IQCDQ96DY2 449 aa23.24■■□□□ 1.31
SNUPN-201ENST00000308588 TRIM5Q9C035 493 aa23.24■■□□□ 1.31
SNUPN-201ENST00000308588 PDCL3Q9H2J4 239 aa23.24■■□□□ 1.31
SNUPN-201ENST00000308588 CCSER2Q9H7U1 834 aa23.24■■□□□ 1.31
SNUPN-201ENST00000308588 CYLDQ9NQC7 956 aa23.24■■□□□ 1.31
SNUPN-201ENST00000308588 ACADSBP45954 432 aa23.23■■□□□ 1.31
SNUPN-201ENST00000308588 DAOAP59103 153 aa23.23■■□□□ 1.31
SNUPN-201ENST00000308588 SPECC1LQ69YQ0 1117 aa23.23■■□□□ 1.31
SNUPN-201ENST00000308588 TMEM35BQ8NCS4 154 aa23.23■■□□□ 1.31
SNUPN-201ENST00000308588 LRRC3BQ96PB8 259 aa23.23■■□□□ 1.31
SNUPN-201ENST00000308588 CPXM1Q96SM3 734 aa23.23■■□□□ 1.31
SNUPN-201ENST00000308588 TDP1Q9NUW8 608 aa23.23■■□□□ 1.31
SNUPN-201ENST00000308588 TJP2Q9UDY2 1190 aa23.23■■□□□ 1.31
SNUPN-201ENST00000308588 MUTYHQ9UIF7 546 aa23.23■■□□□ 1.31
SNUPN-201ENST00000308588 NAGPAQ9UK23 515 aa23.23■■□□□ 1.31
SNUPN-201ENST00000308588 CCL26Q9Y258 94 aa23.23■■□□□ 1.31
SNUPN-201ENST00000308588 CEP83Q9Y592 693 aa23.23■■□□□ 1.31
SNUPN-201ENST00000308588 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.23■■□□□ 1.313e-6■■□□□ 14.2
SNUPN-201ENST00000308588 E5RJQ4 531 aa23.23■■□□□ 1.31
SNUPN-201ENST00000308588 COCHO43405 550 aa23.23■■□□□ 1.31
SNUPN-201ENST00000308588 TLR5O60602 858 aa23.23■■□□□ 1.31
SNUPN-201ENST00000308588 CKMP06732 381 aa23.23■■□□□ 1.31
SNUPN-201ENST00000308588 CCDC172P0C7W6 258 aa23.23■■□□□ 1.31
SNUPN-201ENST00000308588 PSEN1P49768 467 aa23.23■■□□□ 1.31
SNUPN-201ENST00000308588 SFMBT2Q5VUG0 894 aa23.23■■□□□ 1.31
SNUPN-201ENST00000308588 FMNL3Q8IVF7 1028 aa23.23■■□□□ 1.31
SNUPN-201ENST00000308588 SCUBE3Q8IX30 993 aa23.23■■□□□ 1.31
SNUPN-201ENST00000308588 CLEC4CQ8WTT0 213 aa23.23■■□□□ 1.31
SNUPN-201ENST00000308588 KHSRPQ92945 711 aaKnown RBP eCLIP23.23■■□□□ 1.31
SNUPN-201ENST00000308588 PPP1R13BQ96KQ4 1090 aa23.23■■□□□ 1.31
SNUPN-201ENST00000308588 MIS12Q9H081 205 aa23.23■■□□□ 1.31
SNUPN-201ENST00000308588 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.23■■□□□ 1.31
SNUPN-201ENST00000308588 CLIC5Q9NZA1 410 aa23.23■■□□□ 1.31
SNUPN-201ENST00000308588 NUP210Q8TEM1 1887 aaPredicted RBP23.22■■□□□ 1.31
SNUPN-201ENST00000308588 YJEFN3A6XGL0 299 aa23.22■■□□□ 1.31
SNUPN-201ENST00000308588 HEPACAM2A8MVW5 462 aa23.22■■□□□ 1.31
SNUPN-201ENST00000308588 E7ENQ6 273 aa23.22■■□□□ 1.31
SNUPN-201ENST00000308588 PAPSS1O43252 624 aaPredicted RBP23.22■■□□□ 1.31
SNUPN-201ENST00000308588 FBXO21O94952 628 aa23.22■■□□□ 1.31
SNUPN-201ENST00000308588 LSM8O95777 96 aaKnown RBP23.22■■□□□ 1.31
SNUPN-201ENST00000308588 CYP1A1P04798 512 aaPredicted RBP23.22■■□□□ 1.31
SNUPN-201ENST00000308588 RARGP13631 454 aa23.22■■□□□ 1.31
SNUPN-201ENST00000308588 YWHAGP61981 247 aaKnown RBP eCLIP23.22■■□□□ 1.31
SNUPN-201ENST00000308588 ZBED6P86452 979 aa23.22■■□□□ 1.31
SNUPN-201ENST00000308588 ZXDBP98169 803 aa23.22■■□□□ 1.31
SNUPN-201ENST00000308588 TDGQ13569 410 aa23.22■■□□□ 1.31
SNUPN-201ENST00000308588 ZNF268Q14587 947 aaPredicted RBP23.22■■□□□ 1.31
SNUPN-201ENST00000308588 ASIC2Q16515 512 aa23.22■■□□□ 1.31
SNUPN-201ENST00000308588 PTPN20Q4JDL3 420 aa23.22■■□□□ 1.31
SNUPN-201ENST00000308588 VITQ6UXI7 678 aa23.22■■□□□ 1.31
SNUPN-201ENST00000308588 ARHGAP18Q8N392 663 aa23.22■■□□□ 1.31
SNUPN-201ENST00000308588 E2F7Q96AV8 911 aa23.22■■□□□ 1.31
SNUPN-201ENST00000308588 NOX5Q96PH1 765 aa23.22■■□□□ 1.31
SNUPN-201ENST00000308588 PCDHB18PQ96TA0 734 aa23.22■■□□□ 1.31
SNUPN-201ENST00000308588 SYT11Q9BT88 431 aa23.22■■□□□ 1.31
SNUPN-201ENST00000308588 OBP2AQ9NY56 170 aa23.22■■□□□ 1.31
SNUPN-201ENST00000308588 SORCS3Q9UPU3 1222 aa23.22■■□□□ 1.31
SNUPN-201ENST00000308588 TBX18O95935 607 aa23.21■■□□□ 1.31
SNUPN-201ENST00000308588 CASP14P31944 242 aa23.21■■□□□ 1.31
SNUPN-201ENST00000308588 NOMO3P69849 1222 aa23.21■■□□□ 1.31
SNUPN-201ENST00000308588 SLC7A9P82251 487 aa23.21■■□□□ 1.31
SNUPN-201ENST00000308588 HFE2Q6ZVN8 426 aa23.21■■□□□ 1.31
SNUPN-201ENST00000308588 ZNF276Q8N554 614 aa23.21■■□□□ 1.31
SNUPN-201ENST00000308588 CELF5Q8N6W0 485 aaKnown RBP23.21■■□□□ 1.31
SNUPN-201ENST00000308588 ZNF397Q8NF99 534 aaPredicted RBP23.21■■□□□ 1.31
SNUPN-201ENST00000308588 RIN3Q8TB24 985 aa23.21■■□□□ 1.31
SNUPN-201ENST00000308588 IRGQQ8WZA9 623 aa23.21■■□□□ 1.31
SNUPN-201ENST00000308588 AGPAT1Q99943 283 aa23.21■■□□□ 1.31
SNUPN-201ENST00000308588 SMOC2Q9H3U7 446 aa23.21■■□□□ 1.31
SNUPN-201ENST00000308588 NUDT5Q9UKK9 219 aa23.21■■□□□ 1.31
SNUPN-201ENST00000308588 ARHGAP26Q9UNA1 814 aa23.21■■□□□ 1.31
SNUPN-201ENST00000308588 LUC7L2Q9Y383 392 aaKnown RBP23.21■■□□□ 1.31
SNUPN-201ENST00000308588 PRKCIP41743 596 aa23.2■■□□□ 1.3
SNUPN-201ENST00000308588 BSPRYQ5W0U4 402 aa23.2■■□□□ 1.3
SNUPN-201ENST00000308588 MFSD6LQ8IWD5 586 aa23.2■■□□□ 1.3
SNUPN-201ENST00000308588 OLIG1Q8TAK6 271 aa23.2■■□□□ 1.3
SNUPN-201ENST00000308588 CPA5Q8WXQ8 436 aa23.2■■□□□ 1.3
SNUPN-201ENST00000308588 NUCKS1Q9H1E3 243 aaKnown RBP23.2■■□□□ 1.3
SNUPN-201ENST00000308588 DPYSL4O14531 572 aa23.19■■□□□ 1.3
SNUPN-201ENST00000308588 NARSO43776 548 aaKnown RBP23.19■■□□□ 1.3
SNUPN-201ENST00000308588 ERBB2P04626 1255 aa23.19■■□□□ 1.3
SNUPN-201ENST00000308588 RALAP11233 206 aa23.19■■□□□ 1.3
SNUPN-201ENST00000308588 ZNF75DP51815 510 aa23.19■■□□□ 1.3
SNUPN-201ENST00000308588 NAA35Q5VZE5 725 aa23.19■■□□□ 1.3
SNUPN-201ENST00000308588 TRIM72Q6ZMU5 477 aa23.19■■□□□ 1.3
SNUPN-201ENST00000308588 SYN2Q92777 582 aaPredicted RBP23.19■■□□□ 1.3
SNUPN-201ENST00000308588 HAUS4Q9H6D7 363 aa23.19■■□□□ 1.3
SNUPN-201ENST00000308588 KIF9Q9HAQ2 790 aa23.19■■□□□ 1.3
SNUPN-201ENST00000308588 CPQQ9Y646 472 aa23.19■■□□□ 1.3
SNUPN-201ENST00000308588 FAM170AA1A519 330 aa23.18■■□□□ 1.3
SNUPN-201ENST00000308588 MBL2P11226 248 aaPredicted RBP23.18■■□□□ 1.3
SNUPN-201ENST00000308588 UNGP13051 313 aaPredicted RBP23.18■■□□□ 1.3
SNUPN-201ENST00000308588 PSMC3P17980 439 aa23.18■■□□□ 1.3
SNUPN-201ENST00000308588 ATP5C1P36542 298 aaKnown RBP23.18■■□□□ 1.3
SNUPN-201ENST00000308588 TRIM14Q14142 442 aa23.18■■□□□ 1.3
SNUPN-201ENST00000308588 GRM2Q14416 872 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms