RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 RARGP13631 454 aa23.47■■□□□ 1.35
PDLIM2-202ENST00000308354 ETS1P14921 441 aa23.47■■□□□ 1.35
PDLIM2-202ENST00000308354 ATF2P15336 505 aa23.47■■□□□ 1.35
PDLIM2-202ENST00000308354 ITIH2P19823 946 aa23.47■■□□□ 1.35
PDLIM2-202ENST00000308354 ACADSBP45954 432 aa23.47■■□□□ 1.35
PDLIM2-202ENST00000308354 HDAC4P56524 1084 aa23.47■■□□□ 1.35
PDLIM2-202ENST00000308354 ZNF365Q70YC5 407 aa23.47■■□□□ 1.35
PDLIM2-202ENST00000308354 LRRC8DQ7L1W4 858 aa23.47■■□□□ 1.35
PDLIM2-202ENST00000308354 RFX6Q8HWS3 928 aa23.47■■□□□ 1.35
PDLIM2-202ENST00000308354 UHMK1Q8TAS1 419 aaKnown RBP23.47■■□□□ 1.35
PDLIM2-202ENST00000308354 FAM149B1Q96BN6 582 aa23.47■■□□□ 1.35
PDLIM2-202ENST00000308354 DEFB118Q96PH6 123 aa23.47■■□□□ 1.35
PDLIM2-202ENST00000308354 AAASQ9NRG9 546 aa23.47■■□□□ 1.35
PDLIM2-202ENST00000308354 TDRD15B5MCY1 1934 aaKnown RBP23.46■■□□□ 1.35
PDLIM2-202ENST00000308354 FAM163BP0C2L3 166 aa23.46■■□□□ 1.35
PDLIM2-202ENST00000308354 FAM200BP0CF97 657 aa23.46■■□□□ 1.35
PDLIM2-202ENST00000308354 ZSCAN5DPP0CG00 497 aa23.46■■□□□ 1.35
PDLIM2-202ENST00000308354 ITGA8P53708 1063 aa23.46■■□□□ 1.35
PDLIM2-202ENST00000308354 CLLU1OSQ5K130 101 aa23.46■■□□□ 1.35
PDLIM2-202ENST00000308354 RHBDF2Q6PJF5 856 aa23.46■■□□□ 1.35
PDLIM2-202ENST00000308354 ACTL9Q8TC94 416 aa23.46■■□□□ 1.35
PDLIM2-202ENST00000308354 FRMPD3Q5JV73 1810 aa23.46■■□□□ 1.35
PDLIM2-202ENST00000308354 RIPK2O43353 540 aa23.45■■□□□ 1.35
PDLIM2-202ENST00000308354 ODC1P11926 461 aa23.45■■□□□ 1.35
PDLIM2-202ENST00000308354 CHKAP35790 457 aa23.45■■□□□ 1.35
PDLIM2-202ENST00000308354 PRMT2P55345 433 aa23.45■■□□□ 1.35
PDLIM2-202ENST00000308354 OTUD4Q01804 1114 aaKnown RBP23.45■■□□□ 1.35
PDLIM2-202ENST00000308354 CA9Q16790 459 aa23.45■■□□□ 1.35
PDLIM2-202ENST00000308354 TMEM121Q9BTD3 319 aa23.45■■□□□ 1.35
PDLIM2-202ENST00000308354 MAGEB5Q9BZ81 275 aa23.45■■□□□ 1.35
PDLIM2-202ENST00000308354 AP1G2O75843 785 aa23.45■■□□□ 1.34
PDLIM2-202ENST00000308354 DDHD2O94830 711 aa23.45■■□□□ 1.34
PDLIM2-202ENST00000308354 ADCY1Q08828 1119 aa23.45■■□□□ 1.34
PDLIM2-202ENST00000308354 TAZQ16635 292 aa23.45■■□□□ 1.34
PDLIM2-202ENST00000308354 GLB1LQ6UWU2 654 aa23.45■■□□□ 1.34
PDLIM2-202ENST00000308354 CTU1Q7Z7A3 348 aaKnown RBP23.45■■□□□ 1.34
PDLIM2-202ENST00000308354 FAM35AQ86V20 835 aa23.45■■□□□ 1.34
PDLIM2-202ENST00000308354 SMOQ99835 787 aa23.45■■□□□ 1.34
PDLIM2-202ENST00000308354 LRRC4Q9HBW1 653 aa23.45■■□□□ 1.34
PDLIM2-202ENST00000308354 NBNO60934 754 aa23.44■■□□□ 1.34
PDLIM2-202ENST00000308354 MAGOHP61326 146 aaKnown RBP23.44■■□□□ 1.34
PDLIM2-202ENST00000308354 HOOK3Q86VS8 718 aa23.44■■□□□ 1.34
PDLIM2-202ENST00000308354 MYCBPAPQ8TBZ2 947 aa23.44■■□□□ 1.34
PDLIM2-202ENST00000308354 RSPH1Q8WYR4 309 aa23.44■■□□□ 1.34
PDLIM2-202ENST00000308354 TMEM209Q96SK2 561 aa23.44■■□□□ 1.34
PDLIM2-202ENST00000308354 CYLDQ9NQC7 956 aa23.44■■□□□ 1.34
PDLIM2-202ENST00000308354 CDH9Q9ULB4 789 aa23.44■■□□□ 1.34
PDLIM2-202ENST00000308354 SELPP16109 830 aa23.44■■□□□ 1.34
PDLIM2-202ENST00000308354 PECAM1P16284 738 aaPredicted RBP23.44■■□□□ 1.34
PDLIM2-202ENST00000308354 CDK7P50613 346 aa23.44■■□□□ 1.34
PDLIM2-202ENST00000308354 TKTL1P51854 596 aa23.44■■□□□ 1.34
PDLIM2-202ENST00000308354 DPYSL3Q14195 570 aa23.44■■□□□ 1.34
PDLIM2-202ENST00000308354 GPNMBQ14956 572 aa23.44■■□□□ 1.34
PDLIM2-202ENST00000308354 BBS12Q6ZW61 710 aa23.44■■□□□ 1.34
PDLIM2-202ENST00000308354 B4GALNT4Q76KP1 1039 aa23.44■■□□□ 1.34
PDLIM2-202ENST00000308354 GPRIN1Q7Z2K8 1008 aa23.44■■□□□ 1.34
PDLIM2-202ENST00000308354 FAM126BQ8IXS8 530 aa23.44■■□□□ 1.34
PDLIM2-202ENST00000308354 DEFB106AQ8N104 65 aa23.44■■□□□ 1.34
PDLIM2-202ENST00000308354 PWWP2AQ96N64 755 aa23.44■■□□□ 1.34
PDLIM2-202ENST00000308354 SNRNP25Q9BV90 132 aaKnown RBP23.44■■□□□ 1.34
PDLIM2-202ENST00000308354 SAGE1Q9NXZ1 904 aa23.44■■□□□ 1.34
PDLIM2-202ENST00000308354 CWC15Q9P013 229 aaKnown RBP23.44■■□□□ 1.34
PDLIM2-202ENST00000308354 SMIM23A6NLE4 172 aa23.43■■□□□ 1.34
PDLIM2-202ENST00000308354 A6NNZ2 444 aa23.43■■□□□ 1.34
PDLIM2-202ENST00000308354 MDH1P40925 334 aaKnown RBP23.43■■□□□ 1.34
PDLIM2-202ENST00000308354 VCPP55072 806 aaKnown RBP23.43■■□□□ 1.34
PDLIM2-202ENST00000308354 PITX1P78337 314 aaPredicted RBP23.43■■□□□ 1.34
PDLIM2-202ENST00000308354 KRT81Q14533 505 aa23.43■■□□□ 1.34
PDLIM2-202ENST00000308354 OASLQ15646 514 aaKnown RBP23.43■■□□□ 1.34
PDLIM2-202ENST00000308354 TUBB8Q3ZCM7 444 aa23.43■■□□□ 1.34
PDLIM2-202ENST00000308354 NPNTQ6UXI9 565 aa23.43■■□□□ 1.34
PDLIM2-202ENST00000308354 SIX6OS1Q8N1H7 587 aa23.43■■□□□ 1.34
PDLIM2-202ENST00000308354 ZMIZ2Q8NF64 920 aa23.43■■□□□ 1.34
PDLIM2-202ENST00000308354 BCAS4Q8TDM0 211 aa23.43■■□□□ 1.34
PDLIM2-202ENST00000308354 TBCBQ99426 244 aa23.43■■□□□ 1.34
PDLIM2-202ENST00000308354 DDX23Q9BUQ8 820 aaKnown RBP23.43■■□□□ 1.34
PDLIM2-202ENST00000308354 CDC42EP4Q9H3Q1 356 aaKnown RBP23.43■■□□□ 1.34
PDLIM2-202ENST00000308354 DNAJC17Q9NVM6 304 aaKnown RBP23.43■■□□□ 1.34
PDLIM2-202ENST00000308354 ANAPC5Q9UJX4 755 aa23.43■■□□□ 1.34
PDLIM2-202ENST00000308354 EFR3BQ9Y2G0 817 aa23.43■■□□□ 1.34
PDLIM2-202ENST00000308354 TLDC2A0PJX2 215 aa23.43■■□□□ 1.34
PDLIM2-202ENST00000308354 KLRC2P26717 231 aa23.43■■□□□ 1.34
PDLIM2-202ENST00000308354 LSP1P33241 339 aa23.43■■□□□ 1.34
PDLIM2-202ENST00000308354 MRPS5P82675 430 aaKnown RBP23.43■■□□□ 1.34
PDLIM2-202ENST00000308354 DCAF6Q58WW2 860 aa23.43■■□□□ 1.34
PDLIM2-202ENST00000308354 EFHC1Q5JVL4 640 aa23.43■■□□□ 1.34
PDLIM2-202ENST00000308354 METTL23Q86XA0 190 aa23.43■■□□□ 1.34
PDLIM2-202ENST00000308354 ARFGAP2Q8N6H7 521 aa23.43■■□□□ 1.34
PDLIM2-202ENST00000308354 CCDC89Q8N998 374 aa23.43■■□□□ 1.34
PDLIM2-202ENST00000308354 DBF4BQ8NFT6 615 aa23.43■■□□□ 1.34
PDLIM2-202ENST00000308354 MYLPFQ96A32 169 aa23.43■■□□□ 1.34
PDLIM2-202ENST00000308354 C11orf84Q9BUA3 381 aaPredicted RBP23.43■■□□□ 1.34
PDLIM2-202ENST00000308354 TMLHEQ9NVH6 421 aa23.43■■□□□ 1.34
PDLIM2-202ENST00000308354 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.43■■□□□ 1.34
PDLIM2-202ENST00000308354 SYNJ2BP-COX16A0A087WUM0 186 aa23.42■■□□□ 1.34
PDLIM2-202ENST00000308354 DNM1LO00429 736 aa23.42■■□□□ 1.34
PDLIM2-202ENST00000308354 PQBP1O60828 265 aaKnown RBP23.42■■□□□ 1.34
PDLIM2-202ENST00000308354 ENDOD1O94919 500 aa23.42■■□□□ 1.34
PDLIM2-202ENST00000308354 EOMESO95936 686 aa23.42■■□□□ 1.34
PDLIM2-202ENST00000308354 IFNB1P01574 187 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms