RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 TRABDQ9H4I3 376 aa15.8■□□□□ 0.12
LEMD3-201ENST00000308330 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.8■□□□□ 0.12
LEMD3-201ENST00000308330 DNAJC12Q9UKB3 198 aa15.8■□□□□ 0.12
LEMD3-201ENST00000308330 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.8■□□□□ 0.12
LEMD3-201ENST00000308330 IQANK1A0A1B0GTG1 560 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 STK25O00506 426 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 STX7O15400 261 aaKnown RBP15.79■□□□□ 0.12
LEMD3-201ENST00000308330 TIMM44O43615 452 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 FOSL2P15408 326 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 KCNH2Q12809 1159 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 SLC29A2Q14542 456 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 DUOXA2Q1HG44 320 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 TMEM270Q6UE05 265 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 PRR23BQ6ZRT6 265 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 PROM2Q8N271 834 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 BTBD6Q96KE9 485 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 FAM217BQ9NTX9 383 aaPredicted RBP15.79■□□□□ 0.12
LEMD3-201ENST00000308330 COPG2Q9UBF2 871 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 A0A087WXM4 84 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 USP12O75317 370 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 CCNKO75909 580 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 RGS20O76081 388 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 VAMP7P51809 220 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 ZNF844Q08AG5 666 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 NAALADL2Q58DX5 795 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 ITPRIPL1Q6GPH6 555 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 VGLL2Q8N8G2 317 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 CCNYQ8ND76 341 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 CAMKK2Q96RR4 588 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 CALN1Q9BXU9 219 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 QPCTLQ9NXS2 382 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 A6NHS1 94 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 NOS1APO75052 506 aaPredicted RBP15.79■□□□□ 0.12
LEMD3-201ENST00000308330 CBX6O95503 412 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 FDPSP14324 419 aaKnown RBP15.79■□□□□ 0.12
LEMD3-201ENST00000308330 TCF7P36402 384 aaPredicted RBP15.79■□□□□ 0.12
LEMD3-201ENST00000308330 CLK1P49759 484 aaKnown RBP15.79■□□□□ 0.12
LEMD3-201ENST00000308330 ATN1P54259 1190 aaPredicted RBP15.79■□□□□ 0.12
LEMD3-201ENST00000308330 BNC1Q01954 994 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 EFTUD2Q15029 972 aaKnown RBP eCLIP15.79■□□□□ 0.127e-6■■■■■ 30.5
LEMD3-201ENST00000308330 CRY2Q49AN0 593 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 TSPAN14Q8NG11 270 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 HSPH1Q92598 858 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 ADA2Q9NZK5 511 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 SIK3Q9Y2K2 1263 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 COPZ1P61923 177 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 LRP8Q14114 963 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 COBLL1Q53SF7 1204 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 SATL1Q86VE3 508 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 FBXO16Q8IX29 292 aaPredicted RBP15.79■□□□□ 0.12
LEMD3-201ENST00000308330 MICU2Q8IYU8 434 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 C8orf48Q96LL4 319 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 TRIM9Q9C026 710 aa15.79■□□□□ 0.12
LEMD3-201ENST00000308330 CPA3P15088 417 aa15.78■□□□□ 0.12
LEMD3-201ENST00000308330 FKBP1AP62942 108 aaKnown RBP15.78■□□□□ 0.12
LEMD3-201ENST00000308330 PPATQ06203 517 aa15.78■□□□□ 0.12
LEMD3-201ENST00000308330 GFPT1Q06210 699 aaPredicted RBP15.78■□□□□ 0.12
LEMD3-201ENST00000308330 CCDC85BQ15834 202 aaPredicted RBP15.78■□□□□ 0.12
LEMD3-201ENST00000308330 DEFB115Q30KQ5 88 aa15.78■□□□□ 0.12
LEMD3-201ENST00000308330 EFCAB12Q6NXP0 572 aa15.78■□□□□ 0.12
LEMD3-201ENST00000308330 ACAD11Q709F0 780 aa15.78■□□□□ 0.12
LEMD3-201ENST00000308330 C14orf80Q86SX3 495 aa15.78■□□□□ 0.12
LEMD3-201ENST00000308330 GPRASP2Q96D09 838 aa15.78■□□□□ 0.12
LEMD3-201ENST00000308330 PABPC3Q9H361 631 aaKnown RBP15.78■□□□□ 0.12
LEMD3-201ENST00000308330 MAP3K20Q9NYL2 800 aaKnown RBP15.78■□□□□ 0.12
LEMD3-201ENST00000308330 A0A0J9YVX5 310 aa15.78■□□□□ 0.12
LEMD3-201ENST00000308330 FOXN1O15353 648 aa15.78■□□□□ 0.12
LEMD3-201ENST00000308330 BNIP3LO60238 219 aa15.78■□□□□ 0.12
LEMD3-201ENST00000308330 ATP6V1E1P36543 226 aa15.78■□□□□ 0.12
LEMD3-201ENST00000308330 ARL4AP40617 200 aa15.78■□□□□ 0.12
LEMD3-201ENST00000308330 DHX34Q14147 1143 aaKnown RBP15.78■□□□□ 0.12
LEMD3-201ENST00000308330 ANKDD1AQ495B1 522 aa15.78■□□□□ 0.12
LEMD3-201ENST00000308330 ZFP69Q49AA0 526 aa15.78■□□□□ 0.12
LEMD3-201ENST00000308330 HPS5Q9UPZ3 1129 aa15.78■□□□□ 0.12
LEMD3-201ENST00000308330 PPME1Q9Y570 386 aa15.78■□□□□ 0.12
LEMD3-201ENST00000308330 TCRBV5S4A2TA0A5A2 114 aa15.78■□□□□ 0.12
LEMD3-201ENST00000308330 CPB1P15086 417 aa15.78■□□□□ 0.12
LEMD3-201ENST00000308330 ACTR2P61160 394 aa15.78■□□□□ 0.12
LEMD3-201ENST00000308330 VGLL4Q14135 290 aa15.78■□□□□ 0.12
LEMD3-201ENST00000308330 STAT4Q14765 748 aa15.78■□□□□ 0.12
LEMD3-201ENST00000308330 ARRDC4Q8NCT1 418 aa15.78■□□□□ 0.12
LEMD3-201ENST00000308330 MTMR9Q96QG7 549 aa15.78■□□□□ 0.12
LEMD3-201ENST00000308330 CHMP1AQ9HD42 196 aaPredicted RBP15.78■□□□□ 0.12
LEMD3-201ENST00000308330 VTA1Q9NP79 307 aa15.78■□□□□ 0.12
LEMD3-201ENST00000308330 ZNF221Q9UK13 617 aa15.78■□□□□ 0.12
LEMD3-201ENST00000308330 NPHP3-ACAD11A0A0J9YXS1 232 aa15.78■□□□□ 0.12
LEMD3-201ENST00000308330 CCDC182A6NF36 153 aa15.78■□□□□ 0.12
LEMD3-201ENST00000308330 COPEO14579 308 aa15.78■□□□□ 0.12
LEMD3-201ENST00000308330 EMC2Q15006 297 aa15.78■□□□□ 0.12
LEMD3-201ENST00000308330 PLEKHM3Q6ZWE6 761 aa15.78■□□□□ 0.12
LEMD3-201ENST00000308330 USP49Q70CQ1 688 aa15.78■□□□□ 0.12
LEMD3-201ENST00000308330 FAM13CQ8NE31 585 aa15.78■□□□□ 0.12
LEMD3-201ENST00000308330 ZNF507Q8TCN5 953 aa15.78■□□□□ 0.12
LEMD3-201ENST00000308330 C17orf80Q9BSJ5 609 aa15.78■□□□□ 0.12
LEMD3-201ENST00000308330 REXO4Q9GZR2 422 aaKnown RBP15.78■□□□□ 0.12
LEMD3-201ENST00000308330 PCDHAC2Q9Y5I4 1007 aa15.78■□□□□ 0.12
LEMD3-201ENST00000308330 APOA4P06727 396 aa15.77■□□□□ 0.12
LEMD3-201ENST00000308330 NLRP11P59045 1033 aaKnown RBP15.77■□□□□ 0.12
LEMD3-201ENST00000308330 ZNF200P98182 395 aaPredicted RBP15.77■□□□□ 0.12
LEMD3-201ENST00000308330 C4orf22Q6V702 233 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms