RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 ANKZF1Q9H8Y5 726 aa18.33■□□□□ 0.52
KRT28-201ENST00000306658 PCDH10Q9P2E7 1040 aa18.33■□□□□ 0.52
KRT28-201ENST00000306658 MTRRQ9UBK8 725 aa18.33■□□□□ 0.52
KRT28-201ENST00000306658 STK39Q9UEW8 545 aa18.33■□□□□ 0.52
KRT28-201ENST00000306658 INSL6Q9Y581 213 aa18.33■□□□□ 0.52
KRT28-201ENST00000306658 PCDHB12Q9Y5F1 795 aa18.33■□□□□ 0.52
KRT28-201ENST00000306658 USP3Q9Y6I4 520 aa18.33■□□□□ 0.52
KRT28-201ENST00000306658 TARSL2A2RTX5 802 aaKnown RBP18.32■□□□□ 0.52
KRT28-201ENST00000306658 LRRD1A4D1F6 860 aa18.32■□□□□ 0.52
KRT28-201ENST00000306658 YJEFN3A6XGL0 299 aa18.32■□□□□ 0.52
KRT28-201ENST00000306658 E7ENQ6 273 aa18.32■□□□□ 0.52
KRT28-201ENST00000306658 LTFP02788 710 aa18.32■□□□□ 0.52
KRT28-201ENST00000306658 HTRA4P83105 476 aaPredicted RBP18.32■□□□□ 0.52
KRT28-201ENST00000306658 SLC8B1Q6J4K2 584 aa18.32■□□□□ 0.52
KRT28-201ENST00000306658 SCYL2Q6P3W7 929 aa18.32■□□□□ 0.52
KRT28-201ENST00000306658 DDX53Q86TM3 631 aaKnown RBP18.32■□□□□ 0.52
KRT28-201ENST00000306658 FIBCD1Q8N539 461 aa18.32■□□□□ 0.52
KRT28-201ENST00000306658 ATAD1Q8NBU5 361 aa18.32■□□□□ 0.52
KRT28-201ENST00000306658 SLITRK1Q96PX8 696 aa18.32■□□□□ 0.52
KRT28-201ENST00000306658 LRRC1Q9BTT6 524 aa18.32■□□□□ 0.52
KRT28-201ENST00000306658 VN1R3Q9BXE9 311 aa18.32■□□□□ 0.52
KRT28-201ENST00000306658 EPC1Q9H2F5 836 aa18.32■□□□□ 0.52
KRT28-201ENST00000306658 SLITRK6Q9H5Y7 841 aa18.32■□□□□ 0.52
KRT28-201ENST00000306658 RRN3Q9NYV6 651 aa18.32■□□□□ 0.52
KRT28-201ENST00000306658 CDY1Q9Y6F8 540 aa18.32■□□□□ 0.52
KRT28-201ENST00000306658 PI4K2BG5E9Z4 385 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 TNFRSF10BO14763 440 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 RARAP10276 462 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 RALAP11233 206 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 SLC5A3P53794 718 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 SMTNL2Q2TAL5 461 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 KCNT1Q5JUK3 1230 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 RSPO2Q6UXX9 243 aaPredicted RBP18.31■□□□□ 0.52
KRT28-201ENST00000306658 SPOCD1Q6ZMY3 1216 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 KCTD6Q8NC69 237 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 CMASQ8NFW8 434 aaPredicted RBP18.31■□□□□ 0.52
KRT28-201ENST00000306658 CCDC26Q8TAB7 109 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 HERVK_113Q902F9 699 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 RAPGEF5Q92565 580 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 NT5C3BQ969T7 300 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 PARD6BQ9BYG5 372 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 KLHL11Q9NVR0 708 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 SLC4A7Q9Y6M7 1214 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 MTMR11A4FU01 709 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 SYN1P17600 705 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 MCM3P25205 808 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 PTPN7P35236 360 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 GLUD2P49448 558 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 SULT1E1P49888 294 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 EPHB4P54760 987 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 HDAC4P56524 1084 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 DSG1Q02413 1049 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 KRT17Q04695 432 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 TFDP3Q5H9I0 405 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 MFSD7Q6UXD7 560 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 RNF19BQ6ZMZ0 732 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 NUP93Q8N1F7 819 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 PHOSPHO2Q8TCD6 241 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 TEKT4Q8WW24 435 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 SLC9A7Q96T83 725 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 NPY6RQ99463 290 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 LBHD1Q9BQE6 289 aaPredicted RBP18.31■□□□□ 0.52
KRT28-201ENST00000306658 HERC2P3Q9BVR0 1158 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 DDX47Q9H0S4 455 aaKnown RBP18.31■□□□□ 0.52
KRT28-201ENST00000306658 MTIF3Q9H2K0 278 aaKnown RBP18.31■□□□□ 0.52
KRT28-201ENST00000306658 FBXO44Q9H4M3 255 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 NR2E1Q9Y466 385 aa18.31■□□□□ 0.52
KRT28-201ENST00000306658 TJP3O95049 919 aa18.3■□□□□ 0.52
KRT28-201ENST00000306658 NCAM1P13591 858 aa18.3■□□□□ 0.52
KRT28-201ENST00000306658 KDELR1P24390 212 aa18.3■□□□□ 0.52
KRT28-201ENST00000306658 CHRNA3P32297 505 aa18.3■□□□□ 0.52
KRT28-201ENST00000306658 OR1D2P34982 312 aa18.3■□□□□ 0.52
KRT28-201ENST00000306658 LLGL1Q15334 1064 aa18.3■□□□□ 0.52
KRT28-201ENST00000306658 DDR2Q16832 855 aa18.3■□□□□ 0.52
KRT28-201ENST00000306658 HFE2Q6ZVN8 426 aa18.3■□□□□ 0.52
KRT28-201ENST00000306658 BEND5Q7L4P6 421 aa18.3■□□□□ 0.52
KRT28-201ENST00000306658 MAATS1Q7Z4T9 603 aa18.3■□□□□ 0.52
KRT28-201ENST00000306658 MAP7D3Q8IWC1 876 aa18.3■□□□□ 0.52
KRT28-201ENST00000306658 SCAMP5Q8TAC9 235 aa18.3■□□□□ 0.52
KRT28-201ENST00000306658 ANKRD7Q92527 254 aa18.3■□□□□ 0.52
KRT28-201ENST00000306658 HSPH1Q92598 858 aa18.3■□□□□ 0.52
KRT28-201ENST00000306658 RUBCNQ92622 972 aa18.3■□□□□ 0.52
KRT28-201ENST00000306658 ACSF2Q96CM8 615 aaPredicted RBP18.3■□□□□ 0.52
KRT28-201ENST00000306658 PEBP4Q96S96 227 aa18.3■□□□□ 0.52
KRT28-201ENST00000306658 RAD9AQ99638 391 aa18.3■□□□□ 0.52
KRT28-201ENST00000306658 HEMGNQ9BXL5 484 aa18.3■□□□□ 0.52
KRT28-201ENST00000306658 HOMER3Q9NSC5 361 aa18.3■□□□□ 0.52
KRT28-201ENST00000306658 ARGLU1Q9NWB6 273 aaPredicted RBP18.3■□□□□ 0.52
KRT28-201ENST00000306658 CXXC1Q9P0U4 656 aaPredicted RBP18.3■□□□□ 0.52
KRT28-201ENST00000306658 NAALADL1Q9UQQ1 740 aa18.3■□□□□ 0.52
KRT28-201ENST00000306658 EFR3BQ9Y2G0 817 aa18.3■□□□□ 0.52
KRT28-201ENST00000306658 PATJQ8NI35 1801 aa18.3■□□□□ 0.52
KRT28-201ENST00000306658 PTPRSQ13332 1948 aa18.3■□□□□ 0.52
KRT28-201ENST00000306658 TCRBV7S2A1N4TA0A589 114 aa18.29■□□□□ 0.52
KRT28-201ENST00000306658 C2CD2LO14523 706 aa18.29■□□□□ 0.52
KRT28-201ENST00000306658 MDM4O15151 490 aa18.29■□□□□ 0.52
KRT28-201ENST00000306658 PHF2O75151 1096 aa18.29■□□□□ 0.52
KRT28-201ENST00000306658 ENDOD1O94919 500 aa18.29■□□□□ 0.52
KRT28-201ENST00000306658 URODP06132 367 aa18.29■□□□□ 0.52
KRT28-201ENST00000306658 FYNP06241 537 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms