RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 ILKAPQ9H0C8 392 aaPredicted RBP13.75□□□□□ -0.21
DDX54-201ENST00000306014 C12orf65Q9H3J6 166 aaKnown RBP13.75□□□□□ -0.21
DDX54-201ENST00000306014 PLEKHA5Q9HAU0 1116 aa13.75□□□□□ -0.21
DDX54-201ENST00000306014 DMAC2Q9NW81 257 aa13.75□□□□□ -0.21
DDX54-201ENST00000306014 DCDC2Q9UHG0 476 aa13.75□□□□□ -0.21
DDX54-201ENST00000306014 UBIAD1Q9Y5Z9 338 aa13.75□□□□□ -0.21
DDX54-201ENST00000306014 AHDC1Q5TGY3 1603 aaPredicted RBP13.75□□□□□ -0.21
DDX54-201ENST00000306014 SPDYE16A6NNV3 312 aaPredicted RBP13.75□□□□□ -0.21
DDX54-201ENST00000306014 ALOX15BO15296 676 aa13.75□□□□□ -0.21
DDX54-201ENST00000306014 FKBP6O75344 327 aa13.75□□□□□ -0.21
DDX54-201ENST00000306014 CHEK2O96017 543 aa13.75□□□□□ -0.21
DDX54-201ENST00000306014 CHRNB2P17787 502 aa13.75□□□□□ -0.21
DDX54-201ENST00000306014 TGM2P21980 687 aa13.75□□□□□ -0.21
DDX54-201ENST00000306014 SOX11P35716 441 aa13.75□□□□□ -0.21
DDX54-201ENST00000306014 ITGA9Q13797 1035 aa13.75□□□□□ -0.21
DDX54-201ENST00000306014 SPDYE2Q495Y8 402 aa13.75□□□□□ -0.21
DDX54-201ENST00000306014 NPNTQ6UXI9 565 aa13.75□□□□□ -0.21
DDX54-201ENST00000306014 C4orf50Q6ZRC1 276 aa13.75□□□□□ -0.21
DDX54-201ENST00000306014 BRSK2Q8IWQ3 736 aa13.75□□□□□ -0.21
DDX54-201ENST00000306014 APOL2Q9BQE5 337 aa13.75□□□□□ -0.21
DDX54-201ENST00000306014 ING2Q9H160 280 aa13.75□□□□□ -0.21
DDX54-201ENST00000306014 SLC17A7Q9P2U7 560 aa13.75□□□□□ -0.21
DDX54-201ENST00000306014 WARS2Q9UGM6 360 aaKnown RBP13.75□□□□□ -0.21
DDX54-201ENST00000306014 CDYLQ9Y232 598 aa13.75□□□□□ -0.21
DDX54-201ENST00000306014 ANGPTL3Q9Y5C1 460 aa13.75□□□□□ -0.21
DDX54-201ENST00000306014 XPO1O14980 1071 aaKnown RBP13.74□□□□□ -0.21
DDX54-201ENST00000306014 RBL1P28749 1068 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 GLRBP48167 497 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 CRY2Q49AN0 593 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 DENND1BQ6P3S1 775 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 EP400NLQ6ZTU2 488 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 C12orf56Q8IXR9 622 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 DDIASQ8IXT1 998 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 CYP4X1Q8N118 509 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 BBS5Q8N3I7 341 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 ZNF560Q96MR9 790 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 EPAS1Q99814 870 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 DPP3Q9NY33 737 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 NOCTQ9UK39 431 aaKnown RBP13.74□□□□□ -0.21
DDX54-201ENST00000306014 hCG_1818297A0A087WSY0 165 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 VWA5AO00534 786 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 C2CD2LO14523 706 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 GSTA4O15217 222 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 AKAP10O43572 662 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 STAG3L1P0CL83 205 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 NCKAP1LP55160 1127 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 KYAT1Q16773 422 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 C16orf46Q6P387 395 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 APPL2Q8NEU8 664 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 NMD3Q96D46 503 aaKnown RBP13.74□□□□□ -0.21
DDX54-201ENST00000306014 C5P01031 1676 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 HNRNPCP07910 306 aaKnown RBP eCLIP13.74□□□□□ -0.21
DDX54-201ENST00000306014 LAMTOR4Q0VGL1 99 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 MAPRE2Q15555 327 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 IFNEQ86WN2 208 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 PHF13Q86YI8 300 aaPredicted RBP13.74□□□□□ -0.21
DDX54-201ENST00000306014 SLC7A14Q8TBB6 771 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 SKA2Q8WVK7 121 aaPredicted RBP13.74□□□□□ -0.21
DDX54-201ENST00000306014 ZNF317Q96PQ6 595 aaPredicted RBP13.74□□□□□ -0.21
DDX54-201ENST00000306014 ACSS3Q9H6R3 686 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 PIN4Q9Y237 131 aaKnown RBP13.74□□□□□ -0.21
DDX54-201ENST00000306014 MYH6P13533 1939 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 ZBBXA8MT70 800 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 HBP1O60381 514 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 NPTXRO95502 500 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 CPA3P15088 417 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 HOXD13P35453 343 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 SPIRE1Q08AE8 756 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 LRRC38Q5VT99 294 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 PDPK2PQ6A1A2 396 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 IYDQ6PHW0 289 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 C6orf89Q6UWU4 347 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 ISLR2Q6UXK2 745 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 PYDC1Q8WXC3 89 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 LENG9Q96B70 501 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 AP5M1Q9H0R1 490 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 CCDC134Q9H6E4 229 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 THAP1Q9NVV9 213 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 CPSF3Q9UKF6 684 aaKnown RBP13.74□□□□□ -0.21
DDX54-201ENST00000306014 AP4E1Q9UPM8 1137 aa13.74□□□□□ -0.21
DDX54-201ENST00000306014 ZMYM2Q9UBW7 1377 aa13.73□□□□□ -0.21
DDX54-201ENST00000306014 ITGAVP06756 1048 aa13.73□□□□□ -0.21
DDX54-201ENST00000306014 CYP2F1P24903 491 aa13.73□□□□□ -0.21
DDX54-201ENST00000306014 EEF1DP29692 281 aaKnown RBP13.73□□□□□ -0.21
DDX54-201ENST00000306014 FDFT1P37268 417 aa13.73□□□□□ -0.21
DDX54-201ENST00000306014 BST1Q10588 318 aa13.73□□□□□ -0.21
DDX54-201ENST00000306014 ZNF268Q14587 947 aaPredicted RBP13.73□□□□□ -0.21
DDX54-201ENST00000306014 PARP6Q2NL67 630 aa13.73□□□□□ -0.21
DDX54-201ENST00000306014 C9orf131Q5VYM1 1079 aa13.73□□□□□ -0.21
DDX54-201ENST00000306014 SCN4BQ8IWT1 228 aa13.73□□□□□ -0.21
DDX54-201ENST00000306014 ASAP3Q8TDY4 903 aa13.73□□□□□ -0.21
DDX54-201ENST00000306014 AKT1S1Q96B36 256 aa13.73□□□□□ -0.21
DDX54-201ENST00000306014 NRBF2Q96F24 287 aa13.73□□□□□ -0.21
DDX54-201ENST00000306014 KLHL4Q9C0H6 718 aa13.73□□□□□ -0.21
DDX54-201ENST00000306014 LRMDAQ9H2I8 198 aa13.73□□□□□ -0.21
DDX54-201ENST00000306014 TSPAN16Q9UKR8 245 aa13.73□□□□□ -0.21
DDX54-201ENST00000306014 SNED1Q8TER0 1413 aa13.73□□□□□ -0.21
DDX54-201ENST00000306014 A0A0B4J269 797 aa13.73□□□□□ -0.21
DDX54-201ENST00000306014 SNUPNO95149 360 aaKnown RBP13.73□□□□□ -0.21
DDX54-201ENST00000306014 SLC1A6P48664 564 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms