RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 RASGRF2O14827 1237 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 ZNF623O75123 536 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 SCNN1AP37088 669 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 EIF3EP60228 445 aaKnown RBP6.83□□□□□ -1.32
USP47-201ENST00000305481 MORF4L2Q15014 288 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 UPP1Q16831 310 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 ANKRD20A8PQ5CZ79 823 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 MDH1BQ5I0G3 518 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 C6orf118Q5T5N4 469 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 MAP3K21Q5TCX8 1036 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 ANKRD22Q5VYY1 191 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 CD300LGQ6UXG3 332 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 CLEC20AQ6ZU45 233 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 FAM71DQ8N9W8 422 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 MDM1Q8TC05 714 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 SPATA18Q8TC71 538 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 CPT1BQ92523 772 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 PRCCQ92733 491 aaPredicted RBP6.83□□□□□ -1.32
USP47-201ENST00000305481 SLC38A7Q9NVC3 462 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 MTMR10Q9NXD2 777 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 DDX43Q9NXZ2 648 aaKnown RBP6.83□□□□□ -1.32
USP47-201ENST00000305481 GIT1Q9Y2X7 761 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 TCRBV7S3A2A0A539 114 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 FOXO6A8MYZ6 492 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 I3L4J1 428 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 MDM4O15151 490 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 FAM163BP0C2L3 166 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 RBP3P10745 1247 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 NPR3P17342 541 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 L1CAMP32004 1257 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 MAGEA4P43358 317 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 SEC24CP53992 1094 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 CACNA2D1P54289 1103 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 SNX16P57768 344 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 PITX1P78337 314 aaPredicted RBP6.83□□□□□ -1.32
USP47-201ENST00000305481 ADIGQ0VDE8 80 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 NOGQ13253 232 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 ITGA7Q13683 1181 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 PDK2Q15119 407 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 NOMO1Q15155 1222 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 TIGD5Q53EQ6 642 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 OTUD1Q5VV17 481 aaPredicted RBP6.83□□□□□ -1.32
USP47-201ENST00000305481 MFSD5Q6N075 450 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 FAF2Q96CS3 445 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 TBCBQ99426 244 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 ROPN1BQ9BZX4 212 aaPredicted RBP6.83□□□□□ -1.32
USP47-201ENST00000305481 ROPN1Q9HAT0 212 aaPredicted RBP6.83□□□□□ -1.32
USP47-201ENST00000305481 USP29Q9HBJ7 922 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 CTNNAL1Q9UBT7 734 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 A0A0U1RQF3 1178 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 MYBPHLA2RUH7 354 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 RGS16O15492 202 aaPredicted RBP6.83□□□□□ -1.32
USP47-201ENST00000305481 BANF1O75531 89 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 POMCP01189 267 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 MMP13P45452 471 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 ACADSBP45954 432 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 CTCFP49711 727 aaPredicted RBP6.83□□□□□ -1.32
USP47-201ENST00000305481 KRT81Q14533 505 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 HP1BP3Q5SSJ5 553 aaPredicted RBP6.83□□□□□ -1.32
USP47-201ENST00000305481 SLC9A4Q6AI14 798 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 C1orf228Q6PIY5 440 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 ZC3H18Q86VM9 953 aaKnown RBP6.83□□□□□ -1.32
USP47-201ENST00000305481 CCDC185Q8N715 623 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 NAT8LQ8N9F0 302 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 BCAS4Q8TDM0 211 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 ADAM2Q99965 735 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 RTP3Q9BQQ7 232 aa6.83□□□□□ -1.32
USP47-201ENST00000305481 MAK16Q9BXY0 300 aaKnown RBP6.83□□□□□ -1.32
USP47-201ENST00000305481 GPBP1L1Q9HC44 474 aaPredicted RBP6.83□□□□□ -1.32
USP47-201ENST00000305481 A6NNZ2 444 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 GOLGA8MH3BSY2 632 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 TCEA3O75764 348 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 MAP3K6O95382 1288 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 AGTP01019 485 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 MATKP42679 507 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 ACLYP53396 1101 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 MAP3K7CLP57077 242 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 MRPS5P82675 430 aaKnown RBP6.82□□□□□ -1.32
USP47-201ENST00000305481 PTK7Q13308 1070 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 DPYSL2Q16555 572 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 TUBB8Q3ZCM7 444 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 MSS51Q4VC12 460 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 CCDC38Q502W7 563 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 FAM26DQ5JW98 314 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 FNBP1LQ5T0N5 605 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 ERMARDQ5T6L9 678 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 HFE2Q6ZVN8 426 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 GPRIN1Q7Z2K8 1008 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 BNIPLQ7Z465 357 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 DEFB106AQ8N104 65 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 CYP4X1Q8N118 509 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 TAB3Q8N5C8 712 aaPredicted RBP6.82□□□□□ -1.32
USP47-201ENST00000305481 ARFGAP2Q8N6H7 521 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 RNF169Q8NCN4 708 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 ZMIZ2Q8NF64 920 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 LRRN4Q8WUT4 740 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 RSAD2Q8WXG1 361 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 KCTD13Q8WZ19 329 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 P3H4Q92791 437 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 NT5C3BQ969T7 300 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms