RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 DHX35Q9H5Z1 703 aaKnown RBP11.89□□□□□ -0.51
SCG2-201ENST00000305409 GPBP1L1Q9HC44 474 aaPredicted RBP11.89□□□□□ -0.51
SCG2-201ENST00000305409 TMEM30AQ9NV96 361 aa11.89□□□□□ -0.51
SCG2-201ENST00000305409 NOD1Q9Y239 953 aa11.89□□□□□ -0.51
SCG2-201ENST00000305409 DRG1Q9Y295 367 aaKnown RBP11.89□□□□□ -0.51
SCG2-201ENST00000305409 TRPA1O75762 1119 aa11.89□□□□□ -0.51
SCG2-201ENST00000305409 YY1P25490 414 aa11.89□□□□□ -0.51
SCG2-201ENST00000305409 PNPLA4P41247 253 aa11.89□□□□□ -0.51
SCG2-201ENST00000305409 BASP1P80723 227 aaKnown RBP11.89□□□□□ -0.51
SCG2-201ENST00000305409 LMNB2Q03252 620 aa11.89□□□□□ -0.51
SCG2-201ENST00000305409 MSS51Q4VC12 460 aa11.89□□□□□ -0.51
SCG2-201ENST00000305409 DRICH1Q6PGQ1 229 aaPredicted RBP11.89□□□□□ -0.51
SCG2-201ENST00000305409 DSTYKQ6XUX3 929 aa11.89□□□□□ -0.51
SCG2-201ENST00000305409 ZBED8Q8IZ13 594 aa11.89□□□□□ -0.51
SCG2-201ENST00000305409 PCDH19Q8TAB3 1148 aa11.89□□□□□ -0.51
SCG2-201ENST00000305409 PCDH18Q9HCL0 1135 aa11.89□□□□□ -0.51
SCG2-201ENST00000305409 CRTAC1Q9NQ79 661 aa11.89□□□□□ -0.51
SCG2-201ENST00000305409 LCMT1Q9UIC8 334 aa11.89□□□□□ -0.51
SCG2-201ENST00000305409 LAMA3Q16787 3333 aa11.89□□□□□ -0.51
SCG2-201ENST00000305409 APOC4-APOC2K7ER74 178 aa11.88□□□□□ -0.51
SCG2-201ENST00000305409 NDUFAB1O14561 156 aa11.88□□□□□ -0.51
SCG2-201ENST00000305409 MCF2LO15068 1137 aa11.88□□□□□ -0.51
SCG2-201ENST00000305409 APOC2P02655 101 aa11.88□□□□□ -0.51
SCG2-201ENST00000305409 BRCC3P46736 316 aa11.88□□□□□ -0.51
SCG2-201ENST00000305409 TAZQ16635 292 aa11.88□□□□□ -0.51
SCG2-201ENST00000305409 DCAF6Q58WW2 860 aa11.88□□□□□ -0.51
SCG2-201ENST00000305409 SPDYCQ5MJ68 293 aa11.88□□□□□ -0.51
SCG2-201ENST00000305409 FNBP1LQ5T0N5 605 aa11.88□□□□□ -0.51
SCG2-201ENST00000305409 RNASEH2BQ5TBB1 312 aaKnown RBP11.88□□□□□ -0.51
SCG2-201ENST00000305409 DEFB106AQ8N104 65 aa11.88□□□□□ -0.51
SCG2-201ENST00000305409 PQLC3Q8N755 202 aa11.88□□□□□ -0.51
SCG2-201ENST00000305409 P3H4Q92791 437 aa11.88□□□□□ -0.51
SCG2-201ENST00000305409 RNF157Q96PX1 679 aa11.88□□□□□ -0.51
SCG2-201ENST00000305409 ADAM2Q99965 735 aa11.88□□□□□ -0.51
SCG2-201ENST00000305409 RSAD1Q9HA92 442 aa11.88□□□□□ -0.51
SCG2-201ENST00000305409 KRT82Q9NSB4 513 aa11.88□□□□□ -0.51
SCG2-201ENST00000305409 DCAF8L1A6NGE4 600 aa11.88□□□□□ -0.51
SCG2-201ENST00000305409 CHN1P15882 459 aa11.88□□□□□ -0.51
SCG2-201ENST00000305409 MGAT3Q09327 533 aa11.88□□□□□ -0.51
SCG2-201ENST00000305409 PDIA2Q13087 525 aaKnown RBP11.88□□□□□ -0.51
SCG2-201ENST00000305409 LRRC14Q15048 493 aa11.88□□□□□ -0.51
SCG2-201ENST00000305409 C6orf118Q5T5N4 469 aa11.88□□□□□ -0.51
SCG2-201ENST00000305409 SYPL2Q5VXT5 272 aa11.88□□□□□ -0.51
SCG2-201ENST00000305409 GPRIN1Q7Z2K8 1008 aa11.88□□□□□ -0.51
SCG2-201ENST00000305409 ZCCHC9Q8N567 271 aaKnown RBP11.88□□□□□ -0.51
SCG2-201ENST00000305409 PLD5Q8N7P1 536 aa11.88□□□□□ -0.51
SCG2-201ENST00000305409 CD99L2Q8TCZ2 262 aa11.88□□□□□ -0.51
SCG2-201ENST00000305409 CPT1BQ92523 772 aa11.88□□□□□ -0.51
SCG2-201ENST00000305409 TNIP3Q96KP6 325 aa11.88□□□□□ -0.51
SCG2-201ENST00000305409 PCDH9Q9HC56 1237 aa11.88□□□□□ -0.51
SCG2-201ENST00000305409 SCN10AQ9Y5Y9 1956 aa11.88□□□□□ -0.51
SCG2-201ENST00000305409 POC1B-GALNT4F8VUJ3 575 aa11.87□□□□□ -0.51
SCG2-201ENST00000305409 B3GAT3O94766 335 aa11.87□□□□□ -0.51
SCG2-201ENST00000305409 ITGB1P05556 798 aa11.87□□□□□ -0.51
SCG2-201ENST00000305409 LRPAP1P30533 357 aa11.87□□□□□ -0.51
SCG2-201ENST00000305409 IFNAR2P48551 515 aa11.87□□□□□ -0.51
SCG2-201ENST00000305409 SP3Q02447 781 aa11.87□□□□□ -0.51
SCG2-201ENST00000305409 CAV1Q03135 178 aa11.87□□□□□ -0.51
SCG2-201ENST00000305409 NME3Q13232 169 aa11.87□□□□□ -0.51
SCG2-201ENST00000305409 LPIN1Q14693 890 aa11.87□□□□□ -0.51
SCG2-201ENST00000305409 ACAP1Q15027 740 aa11.87□□□□□ -0.51
SCG2-201ENST00000305409 TIGD5Q53EQ6 642 aa11.87□□□□□ -0.51
SCG2-201ENST00000305409 ANKRD20A8PQ5CZ79 823 aa11.87□□□□□ -0.51
SCG2-201ENST00000305409 CLEC20AQ6ZU45 233 aa11.87□□□□□ -0.51
SCG2-201ENST00000305409 EXOC3L1Q86VI1 746 aa11.87□□□□□ -0.51
SCG2-201ENST00000305409 PRCCQ92733 491 aaPredicted RBP11.87□□□□□ -0.51
SCG2-201ENST00000305409 TRPV6Q9H1D0 765 aa11.87□□□□□ -0.51
SCG2-201ENST00000305409 VPS37BQ9H9H4 285 aa11.87□□□□□ -0.51
SCG2-201ENST00000305409 ETNK2Q9NVF9 386 aa11.87□□□□□ -0.51
SCG2-201ENST00000305409 NRP1O14786 923 aa11.87□□□□□ -0.51
SCG2-201ENST00000305409 KPNA6O60684 536 aa11.87□□□□□ -0.51
SCG2-201ENST00000305409 TMEM63AO94886 807 aa11.87□□□□□ -0.51
SCG2-201ENST00000305409 ENDOD1O94919 500 aa11.87□□□□□ -0.51
SCG2-201ENST00000305409 SETSIPP0DME0 302 aa11.87□□□□□ -0.51
SCG2-201ENST00000305409 WARSP23381 471 aaKnown RBP11.87□□□□□ -0.51
SCG2-201ENST00000305409 RBL1P28749 1068 aa11.87□□□□□ -0.51
SCG2-201ENST00000305409 ROR1Q01973 937 aa11.87□□□□□ -0.51
SCG2-201ENST00000305409 GBE1Q04446 702 aa11.87□□□□□ -0.51
SCG2-201ENST00000305409 ITGA7Q13683 1181 aa11.87□□□□□ -0.51
SCG2-201ENST00000305409 LIMS2Q7Z4I7 341 aa11.87□□□□□ -0.51
SCG2-201ENST00000305409 PGM2Q96G03 612 aa11.87□□□□□ -0.51
SCG2-201ENST00000305409 PCED1BQ96HM7 432 aa11.87□□□□□ -0.51
SCG2-201ENST00000305409 TMEM209Q96SK2 561 aa11.87□□□□□ -0.51
SCG2-201ENST00000305409 DUSP16Q9BY84 665 aa11.87□□□□□ -0.51
SCG2-201ENST00000305409 UPF3AQ9H1J1 476 aaKnown RBP11.87□□□□□ -0.51
SCG2-201ENST00000305409 MRPL42Q9Y6G3 142 aaKnown RBP11.87□□□□□ -0.51
SCG2-201ENST00000305409 GPR182O15218 404 aa11.86□□□□□ -0.51
SCG2-201ENST00000305409 KCNN4O15554 427 aa11.86□□□□□ -0.51
SCG2-201ENST00000305409 AVILO75366 819 aa11.86□□□□□ -0.51
SCG2-201ENST00000305409 NPR3P17342 541 aa11.86□□□□□ -0.51
SCG2-201ENST00000305409 AMPD1P23109 780 aa11.86□□□□□ -0.51
SCG2-201ENST00000305409 CYP2F1P24903 491 aa11.86□□□□□ -0.51
SCG2-201ENST00000305409 SULT1E1P49888 294 aa11.86□□□□□ -0.51
SCG2-201ENST00000305409 BCAR1P56945 870 aa11.86□□□□□ -0.51
SCG2-201ENST00000305409 SLC10A2Q12908 348 aaPredicted RBP11.86□□□□□ -0.51
SCG2-201ENST00000305409 QPCTQ16769 361 aa11.86□□□□□ -0.51
SCG2-201ENST00000305409 BOLA3Q53S33 107 aa11.86□□□□□ -0.51
SCG2-201ENST00000305409 SLC26A9Q7LBE3 791 aa11.86□□□□□ -0.51
SCG2-201ENST00000305409 NLRP14Q86W24 1093 aa11.86□□□□□ -0.51
SCG2-201ENST00000305409 ARFGAP2Q8N6H7 521 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms