RNA–Protein interactions for RNA: ENST00000304465.7

SRGAP2C-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5 BASIC

Gene SRGAP2C, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-201ENST00000304465 CACNA1HO95180 2353 aa16.97■□□□□ 0.31
SRGAP2C-201ENST00000304465 PROB1E7EW31 1015 aa16.96■□□□□ 0.31
SRGAP2C-201ENST00000304465 F8VZ95 297 aa16.96■□□□□ 0.31
SRGAP2C-201ENST00000304465 ARNTLO00327 626 aa16.96■□□□□ 0.31
SRGAP2C-201ENST00000304465 PLEKP08567 350 aaPredicted RBP16.96■□□□□ 0.31
SRGAP2C-201ENST00000304465 PNMA6AP0CW24 399 aaPredicted RBP16.96■□□□□ 0.31
SRGAP2C-201ENST00000304465 DRAP1Q14919 205 aaPredicted RBP16.96■□□□□ 0.31
SRGAP2C-201ENST00000304465 OLIG1Q8TAK6 271 aa16.96■□□□□ 0.31
SRGAP2C-201ENST00000304465 TTC8Q8TAM2 541 aa16.96■□□□□ 0.31
SRGAP2C-201ENST00000304465 USP13Q92995 863 aaPredicted RBP16.96■□□□□ 0.31
SRGAP2C-201ENST00000304465 NKD2Q969F2 451 aaPredicted RBP16.96■□□□□ 0.31
SRGAP2C-201ENST00000304465 CLDN23Q96B33 292 aa16.96■□□□□ 0.31
SRGAP2C-201ENST00000304465 LRRC3BQ96PB8 259 aa16.96■□□□□ 0.31
SRGAP2C-201ENST00000304465 ZNF518BQ9C0D4 1074 aa16.96■□□□□ 0.31
SRGAP2C-201ENST00000304465 UBE2TQ9NPD8 197 aaPredicted RBP16.96■□□□□ 0.31
SRGAP2C-201ENST00000304465 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.96■□□□□ 0.313e-6■■■■■ 94.9
SRGAP2C-201ENST00000304465 GKN1Q9NS71 199 aa16.96■□□□□ 0.31
SRGAP2C-201ENST00000304465 GTSE1Q9NYZ3 720 aa16.96■□□□□ 0.31
SRGAP2C-201ENST00000304465 CLDN5O00501 218 aa16.95■□□□□ 0.3
SRGAP2C-201ENST00000304465 ASS1P00966 412 aaKnown RBP16.95■□□□□ 0.3
SRGAP2C-201ENST00000304465 PPP3CCP48454 512 aa16.95■□□□□ 0.3
SRGAP2C-201ENST00000304465 NOP14P78316 857 aaKnown RBP16.95■□□□□ 0.3
SRGAP2C-201ENST00000304465 ZNF268Q14587 947 aaPredicted RBP16.95■□□□□ 0.3
SRGAP2C-201ENST00000304465 ASTE1Q2TB18 679 aaPredicted RBP16.95■□□□□ 0.3
SRGAP2C-201ENST00000304465 ITPRIPL2Q3MIP1 535 aa16.95■□□□□ 0.3
SRGAP2C-201ENST00000304465 SFMBT2Q5VUG0 894 aa16.95■□□□□ 0.3
SRGAP2C-201ENST00000304465 SPOPLQ6IQ16 392 aa16.95■□□□□ 0.3
SRGAP2C-201ENST00000304465 TOGARAM2Q6ZUX3 1019 aa16.95■□□□□ 0.3
SRGAP2C-201ENST00000304465 RALGPS2Q86X27 583 aaPredicted RBP16.95■□□□□ 0.3
SRGAP2C-201ENST00000304465 NT5C1BQ96P26 610 aa16.95■□□□□ 0.3
SRGAP2C-201ENST00000304465 SLITRK1Q96PX8 696 aa16.95■□□□□ 0.3
SRGAP2C-201ENST00000304465 B3GNT5Q9BYG0 378 aa16.95■□□□□ 0.3
SRGAP2C-201ENST00000304465 LMAN1LQ9HAT1 526 aa16.95■□□□□ 0.3
SRGAP2C-201ENST00000304465 CCL26Q9Y258 94 aa16.95■□□□□ 0.3
SRGAP2C-201ENST00000304465 NME7Q9Y5B8 376 aa16.95■□□□□ 0.3
SRGAP2C-201ENST00000304465 SPECC1L-ADORA2AF8WAN1 911 aa16.94■□□□□ 0.3
SRGAP2C-201ENST00000304465 FOXN3O00409 490 aaPredicted RBP16.94■□□□□ 0.3
SRGAP2C-201ENST00000304465 TADA3O75528 432 aa16.94■□□□□ 0.3
SRGAP2C-201ENST00000304465 ABL1P00519 1130 aa16.94■□□□□ 0.3
SRGAP2C-201ENST00000304465 SP9P0CG40 484 aa16.94■□□□□ 0.3
SRGAP2C-201ENST00000304465 HDCP19113 662 aa16.94■□□□□ 0.3
SRGAP2C-201ENST00000304465 PRKCIP41743 596 aa16.94■□□□□ 0.3
SRGAP2C-201ENST00000304465 SOX9P48436 509 aa16.94■□□□□ 0.3
SRGAP2C-201ENST00000304465 AMPD2Q01433 879 aa16.94■□□□□ 0.3
SRGAP2C-201ENST00000304465 TNK2Q07912 1038 aa16.94■□□□□ 0.3
SRGAP2C-201ENST00000304465 IFRD2Q12894 506 aaPredicted RBP16.94■□□□□ 0.3
SRGAP2C-201ENST00000304465 RAPGEF1Q13905 1077 aa16.94■□□□□ 0.3
SRGAP2C-201ENST00000304465 LRRC32Q14392 662 aa16.94■□□□□ 0.3
SRGAP2C-201ENST00000304465 PPP2R5DQ14738 602 aa16.94■□□□□ 0.3
SRGAP2C-201ENST00000304465 ACOT1Q86TX2 421 aa16.94■□□□□ 0.3
SRGAP2C-201ENST00000304465 UNC93AQ86WB7 457 aa16.94■□□□□ 0.3
SRGAP2C-201ENST00000304465 ARL14EPQ8N8R7 260 aaPredicted RBP16.94■□□□□ 0.3
SRGAP2C-201ENST00000304465 SHC3Q92529 594 aa16.94■□□□□ 0.3
SRGAP2C-201ENST00000304465 SMARCD1Q96GM5 515 aa16.94■□□□□ 0.3
SRGAP2C-201ENST00000304465 CYP2S1Q96SQ9 504 aa16.94■□□□□ 0.3
SRGAP2C-201ENST00000304465 IER2Q9BTL4 223 aa16.94■□□□□ 0.3
SRGAP2C-201ENST00000304465 SDCBP2Q9H190 292 aa16.94■□□□□ 0.3
SRGAP2C-201ENST00000304465 FBXO4Q9UKT5 387 aa16.94■□□□□ 0.3
SRGAP2C-201ENST00000304465 COL4A3Q01955 1670 aa16.94■□□□□ 0.3
SRGAP2C-201ENST00000304465 USP27XA6NNY8 438 aa16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 ZNF500O60304 480 aaPredicted RBP16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 RTN3O95197 1032 aaPredicted RBP16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 PFKLP17858 780 aa16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 CTHP32929 405 aa16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 SOX5P35711 763 aa16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 NDST1P52848 882 aa16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 GCNT1Q02742 428 aa16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 CSTF1Q05048 431 aaKnown RBP16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 MAPK8IP2Q13387 824 aaPredicted RBP16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 TSR1Q2NL82 804 aaKnown RBP16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 FAM35AQ86V20 835 aa16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 SPAG5Q96R06 1193 aa16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 SYT11Q9BT88 431 aa16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 TTLL2Q9BWV7 592 aa16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 SEMA4AQ9H3S1 761 aa16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 NHEJ1Q9H9Q4 299 aaPredicted RBP16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 CYP3A43Q9HB55 503 aa16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 DMAP1Q9NPF5 467 aaPredicted RBP16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 SPTLC3Q9NUV7 552 aa16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 ZNHIT6Q9NWK9 470 aaKnown RBP16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 REXO2Q9Y3B8 237 aaKnown RBP16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 C2orf78A6NCI8 922 aa16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 SHISA7A6NL88 538 aa16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 NRDCO43847 1150 aa16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 AP1G2O75843 785 aa16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 SERPING1P05155 500 aa16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 YWHAQP27348 245 aa16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 EIF4A3P38919 411 aaKnown RBP16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 STAT1P42224 750 aa16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 ASPAP45381 313 aa16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 USP46P62068 366 aa16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 RUNX3Q13761 415 aa16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 PDGFRLQ15198 375 aa16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 ASIC2Q16515 512 aa16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 ARHGAP44Q17R89 818 aa16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 FAM71AQ8IYT1 594 aa16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 CCAR2Q8N163 923 aaKnown RBP16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 NUP93Q8N1F7 819 aa16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 PPM1KQ8N3J5 372 aa16.93■□□□□ 0.3
SRGAP2C-201ENST00000304465 PDZD8Q8NEN9 1154 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms