RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 PCED1BQ96HM7 432 aa6.89□□□□□ -1.31
ITGB1-201ENST00000302278 HSPA12BQ96MM6 686 aa6.89□□□□□ -1.31
ITGB1-201ENST00000302278 ELOVL4Q9GZR5 314 aa6.89□□□□□ -1.31
ITGB1-201ENST00000302278 BCCIPQ9P287 314 aaKnown RBP eCLIP6.89□□□□□ -1.31
ITGB1-201ENST00000302278 TENM4Q6N022 2769 aa6.89□□□□□ -1.31
ITGB1-201ENST00000302278 METTL12A8MUP2 240 aa6.89□□□□□ -1.31
ITGB1-201ENST00000302278 TNFSF14O43557 240 aa6.89□□□□□ -1.31
ITGB1-201ENST00000302278 DTNBO60941 627 aa6.89□□□□□ -1.31
ITGB1-201ENST00000302278 LONP1P36776 959 aaKnown RBP6.89□□□□□ -1.31
ITGB1-201ENST00000302278 SURF1Q15526 300 aa6.89□□□□□ -1.31
ITGB1-201ENST00000302278 PCSK4Q6UW60 755 aa6.89□□□□□ -1.31
ITGB1-201ENST00000302278 ARMCX6Q7L4S7 300 aa6.89□□□□□ -1.31
ITGB1-201ENST00000302278 FAM217AQ8IXS0 508 aa6.89□□□□□ -1.31
ITGB1-201ENST00000302278 MYCT1Q8N699 235 aa6.89□□□□□ -1.31
ITGB1-201ENST00000302278 MDM1Q8TC05 714 aa6.89□□□□□ -1.31
ITGB1-201ENST00000302278 SNRNP27Q8WVK2 155 aaKnown RBP6.89□□□□□ -1.31
ITGB1-201ENST00000302278 GTPBP2Q9BX10 602 aaKnown RBP6.89□□□□□ -1.31
ITGB1-201ENST00000302278 KLF16Q9BXK1 252 aaPredicted RBP6.89□□□□□ -1.31
ITGB1-201ENST00000302278 CSNK1G1Q9HCP0 422 aa6.89□□□□□ -1.31
ITGB1-201ENST00000302278 TMEM30AQ9NV96 361 aa6.89□□□□□ -1.31
ITGB1-201ENST00000302278 CFAP97Q9P2B7 532 aa6.89□□□□□ -1.31
ITGB1-201ENST00000302278 AGAP1Q9UPQ3 857 aa6.89□□□□□ -1.31
ITGB1-201ENST00000302278 TEX51A0A1B0GUA7 166 aa6.88□□□□□ -1.31
ITGB1-201ENST00000302278 COCHO43405 550 aa6.88□□□□□ -1.31
ITGB1-201ENST00000302278 FAM13AO94988 1023 aa6.88□□□□□ -1.31
ITGB1-201ENST00000302278 PENKP01210 267 aaPredicted RBP6.88□□□□□ -1.31
ITGB1-201ENST00000302278 GAP43P17677 238 aa6.88□□□□□ -1.31
ITGB1-201ENST00000302278 EIF2S3P41091 472 aaKnown RBP6.88□□□□□ -1.31
ITGB1-201ENST00000302278 CCDC142Q17RM4 750 aa6.88□□□□□ -1.31
ITGB1-201ENST00000302278 PLEKHG6Q3KR16 790 aa6.88□□□□□ -1.31
ITGB1-201ENST00000302278 EGFLAMQ63HQ2 1017 aa6.88□□□□□ -1.31
ITGB1-201ENST00000302278 SCARA3Q6AZY7 606 aa6.88□□□□□ -1.31
ITGB1-201ENST00000302278 DYMQ7RTS9 669 aa6.88□□□□□ -1.31
ITGB1-201ENST00000302278 EXOC7Q9UPT5 735 aa6.88□□□□□ -1.31
ITGB1-201ENST00000302278 PCDHB9Q9Y5E1 797 aa6.88□□□□□ -1.31
ITGB1-201ENST00000302278 TISP43B9A030 160 aa6.88□□□□□ -1.31
ITGB1-201ENST00000302278 DFNA5O60443 496 aa6.88□□□□□ -1.31
ITGB1-201ENST00000302278 ACAT1P24752 427 aaKnown RBP6.88□□□□□ -1.31
ITGB1-201ENST00000302278 TDRD10Q5VZ19 366 aaKnown RBP6.88□□□□□ -1.31
ITGB1-201ENST00000302278 GRAMD4Q6IC98 578 aa6.88□□□□□ -1.31
ITGB1-201ENST00000302278 WDR49Q8IV35 697 aa6.88□□□□□ -1.31
ITGB1-201ENST00000302278 DNAJC19Q96DA6 116 aa6.88□□□□□ -1.31
ITGB1-201ENST00000302278 CYLDQ9NQC7 956 aa6.88□□□□□ -1.31
ITGB1-201ENST00000302278 INTS13Q9NVM9 706 aa6.88□□□□□ -1.31
ITGB1-201ENST00000302278 WDR35Q9P2L0 1181 aa6.88□□□□□ -1.31
ITGB1-201ENST00000302278 DEC1Q9P2X7 70 aa6.88□□□□□ -1.31
ITGB1-201ENST00000302278 THAP10Q9P2Z0 257 aaPredicted RBP6.88□□□□□ -1.31
ITGB1-201ENST00000302278 STK17AQ9UEE5 414 aa6.88□□□□□ -1.31
ITGB1-201ENST00000302278 CENPBP07199 599 aaPredicted RBP6.88□□□□□ -1.31
ITGB1-201ENST00000302278 ANXA13P27216 316 aa6.88□□□□□ -1.31
ITGB1-201ENST00000302278 MATKP42679 507 aa6.88□□□□□ -1.31
ITGB1-201ENST00000302278 COPAP53621 1224 aa6.88□□□□□ -1.31
ITGB1-201ENST00000302278 GUCY1B3Q02153 619 aa6.88□□□□□ -1.31
ITGB1-201ENST00000302278 KDSRQ06136 332 aa6.88□□□□□ -1.31
ITGB1-201ENST00000302278 C10orf76Q5T2E6 689 aa6.88□□□□□ -1.31
ITGB1-201ENST00000302278 NUP93Q8N1F7 819 aa6.88□□□□□ -1.31
ITGB1-201ENST00000302278 ZNF843Q8N446 348 aa6.88□□□□□ -1.31
ITGB1-201ENST00000302278 OR2I1PQ8NGU4 316 aa6.88□□□□□ -1.31
ITGB1-201ENST00000302278 ORAI3Q9BRQ5 295 aa6.88□□□□□ -1.31
ITGB1-201ENST00000302278 NRSN2Q9GZP1 204 aa6.88□□□□□ -1.31
ITGB1-201ENST00000302278 PTPRJQ12913 1337 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 HCRTO43612 131 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 CILPO75339 1184 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 BMP15O95972 392 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 LMO2P25791 158 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 DDIT3P35638 169 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 GRIA4P48058 902 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 CACNA2D1P54289 1103 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 TAF10Q12962 218 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 MYO1EQ12965 1108 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 ORC1Q13415 861 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 CNNM4Q6P4Q7 775 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 HNRNPLLQ8WVV9 542 aaKnown RBP6.87□□□□□ -1.31
ITGB1-201ENST00000302278 LARP4BQ92615 738 aaKnown RBP6.87□□□□□ -1.31
ITGB1-201ENST00000302278 NXPE2Q96DL1 559 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 PIWIL1Q96J94 861 aaKnown RBP6.87□□□□□ -1.31
ITGB1-201ENST00000302278 SLITRK1Q96PX8 696 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 ACCSQ96QU6 501 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 FBRSQ9HAH7 460 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 RBAKQ9NYW8 714 aaPredicted RBP6.87□□□□□ -1.31
ITGB1-201ENST00000302278 FNDC3AQ9Y2H6 1198 aaKnown RBP6.87□□□□□ -1.31
ITGB1-201ENST00000302278 ZFYVE26Q68DK2 2539 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 KCNJ18B7U540 433 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 PRRT4C9JH25 899 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 ATP2C2O75185 946 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 BDNFP23560 247 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 MCCD1P59942 119 aaPredicted RBP6.87□□□□□ -1.31
ITGB1-201ENST00000302278 RAD51AP2Q09MP3 1159 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 PKDCCQ504Y2 493 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 KIAA0907Q7Z7F0 614 aaPredicted RBP6.87□□□□□ -1.31
ITGB1-201ENST00000302278 BBS7Q8IWZ6 715 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 CSGALNACT2Q8N6G5 542 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 TSC1Q92574 1164 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 IGSF8Q969P0 613 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 KIF2CQ99661 725 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 PNPLA8Q9NP80 782 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 TM7SF3Q9NS93 570 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 PLCG1P19174 1290 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 SNRPFP62306 86 aaKnown RBP6.87□□□□□ -1.31
ITGB1-201ENST00000302278 CLDN10P78369 228 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms