RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 NME3Q13232 169 aa14.97□□□□□ -0.01
CDT1-201ENST00000301019 MAP3K21Q5TCX8 1036 aa14.97□□□□□ -0.01
CDT1-201ENST00000301019 PACS1Q6VY07 963 aa14.97□□□□□ -0.01
CDT1-201ENST00000301019 RNF19BQ6ZMZ0 732 aa14.97□□□□□ -0.01
CDT1-201ENST00000301019 HACE1Q8IYU2 909 aa14.97□□□□□ -0.01
CDT1-201ENST00000301019 SLC17A6Q9P2U8 582 aa14.97□□□□□ -0.01
CDT1-201ENST00000301019 ZNF536O15090 1300 aa14.97□□□□□ -0.01
CDT1-201ENST00000301019 SH3PXD2BA1X283 911 aa14.96□□□□□ -0.01
CDT1-201ENST00000301019 TESPA1A2RU30 521 aaPredicted RBP14.96□□□□□ -0.01
CDT1-201ENST00000301019 KRT1P04264 644 aa14.96□□□□□ -0.01
CDT1-201ENST00000301019 RFC1P35251 1148 aaPredicted RBP14.96□□□□□ -0.01
CDT1-201ENST00000301019 HNRNPDQ14103 355 aaKnown RBP14.96□□□□□ -0.01
CDT1-201ENST00000301019 OGFOD1Q8N543 542 aa14.96□□□□□ -0.01
CDT1-201ENST00000301019 HPS1Q92902 700 aa14.96□□□□□ -0.01
CDT1-201ENST00000301019 NAA50Q9GZZ1 169 aaKnown RBP14.96□□□□□ -0.01
CDT1-201ENST00000301019 WWP1Q9H0M0 922 aa14.96□□□□□ -0.01
CDT1-201ENST00000301019 VPS11Q9H270 941 aa14.96□□□□□ -0.01
CDT1-201ENST00000301019 KDM3AQ9Y4C1 1321 aa14.96□□□□□ -0.01
CDT1-201ENST00000301019 C1orf232A0A0U1RR37 186 aa14.96□□□□□ -0.01
CDT1-201ENST00000301019 CPOXP36551 454 aa14.96□□□□□ -0.01
CDT1-201ENST00000301019 CAV1Q03135 178 aa14.96□□□□□ -0.01
CDT1-201ENST00000301019 FSTL1Q12841 308 aa14.96□□□□□ -0.01
CDT1-201ENST00000301019 KCNT2Q6UVM3 1135 aa14.96□□□□□ -0.01
CDT1-201ENST00000301019 Q6ZNX1 250 aa14.96□□□□□ -0.01
CDT1-201ENST00000301019 SEMA4DQ92854 862 aa14.96□□□□□ -0.01
CDT1-201ENST00000301019 CEP295NLQ96MC4 621 aa14.96□□□□□ -0.01
CDT1-201ENST00000301019 MPHOSPH6Q99547 160 aaKnown RBP14.96□□□□□ -0.01
CDT1-201ENST00000301019 TBC1D23Q9NUY8 699 aa14.96□□□□□ -0.01
CDT1-201ENST00000301019 PNPOQ9NVS9 261 aa14.96□□□□□ -0.01
CDT1-201ENST00000301019 NDUFA13Q9P0J0 144 aa14.96□□□□□ -0.01
CDT1-201ENST00000301019 TMEM150BA6NC51 233 aa14.96□□□□□ -0.02
CDT1-201ENST00000301019 KDM1AO60341 852 aa14.96□□□□□ -0.02
CDT1-201ENST00000301019 NUDT2P50583 147 aa14.96□□□□□ -0.02
CDT1-201ENST00000301019 PPM1LQ5SGD2 360 aa14.96□□□□□ -0.02
CDT1-201ENST00000301019 GPR107Q5VW38 600 aa14.96□□□□□ -0.02
CDT1-201ENST00000301019 C12orf50Q8NA57 414 aaPredicted RBP14.96□□□□□ -0.02
CDT1-201ENST00000301019 COX4I2Q96KJ9 171 aa14.96□□□□□ -0.02
CDT1-201ENST00000301019 WDR83Q9BRX9 315 aaKnown RBP14.96□□□□□ -0.02
CDT1-201ENST00000301019 GPRC5CQ9NQ84 441 aa14.96□□□□□ -0.02
CDT1-201ENST00000301019 SLC38A7Q9NVC3 462 aa14.96□□□□□ -0.02
CDT1-201ENST00000301019 F5H6K3 240 aa14.95□□□□□ -0.02
CDT1-201ENST00000301019 AMHP03971 560 aa14.95□□□□□ -0.02
CDT1-201ENST00000301019 ENO3P13929 434 aaPredicted RBP14.95□□□□□ -0.02
CDT1-201ENST00000301019 KLRC2P26717 231 aa14.95□□□□□ -0.02
CDT1-201ENST00000301019 C21orf59P57076 290 aa14.95□□□□□ -0.02
CDT1-201ENST00000301019 PQLC1Q8N2U9 271 aa14.95□□□□□ -0.02
CDT1-201ENST00000301019 ZNF713Q8N859 430 aaPredicted RBP14.95□□□□□ -0.02
CDT1-201ENST00000301019 EME1Q96AY2 570 aa14.95□□□□□ -0.02
CDT1-201ENST00000301019 KLHL25Q9H0H3 589 aa14.95□□□□□ -0.02
CDT1-201ENST00000301019 SENP1Q9P0U3 644 aa14.95□□□□□ -0.02
CDT1-201ENST00000301019 K7ENM7 598 aa14.95□□□□□ -0.02
CDT1-201ENST00000301019 EIF3FO00303 357 aaPredicted RBP14.95□□□□□ -0.02
CDT1-201ENST00000301019 PLOD2O00469 737 aa14.95□□□□□ -0.02
CDT1-201ENST00000301019 SLITRK3O94933 977 aa14.95□□□□□ -0.02
CDT1-201ENST00000301019 KCNH1O95259 989 aa14.95□□□□□ -0.02
CDT1-201ENST00000301019 UGT1A6P19224 532 aa14.95□□□□□ -0.02
CDT1-201ENST00000301019 EIF2AK2P19525 551 aaKnown RBP14.95□□□□□ -0.02
CDT1-201ENST00000301019 CDH3P22223 829 aa14.95□□□□□ -0.02
CDT1-201ENST00000301019 UGT1A1P22309 533 aa14.95□□□□□ -0.02
CDT1-201ENST00000301019 UGT1A4P22310 534 aa14.95□□□□□ -0.02
CDT1-201ENST00000301019 UGT1A3P35503 534 aa14.95□□□□□ -0.02
CDT1-201ENST00000301019 UGT1A5P35504 534 aa14.95□□□□□ -0.02
CDT1-201ENST00000301019 ELK3P41970 407 aa14.95□□□□□ -0.02
CDT1-201ENST00000301019 BTDP43251 543 aa14.95□□□□□ -0.02
CDT1-201ENST00000301019 RPL7AP62424 266 aaKnown RBP14.95□□□□□ -0.02
CDT1-201ENST00000301019 SHROOM1Q2M3G4 852 aaPredicted RBP14.95□□□□□ -0.02
CDT1-201ENST00000301019 CCDC106Q9BWC9 280 aa14.95□□□□□ -0.02
CDT1-201ENST00000301019 MRGBPQ9NV56 204 aa14.95□□□□□ -0.02
CDT1-201ENST00000301019 SUN2Q9UH99 717 aa14.95□□□□□ -0.02
CDT1-201ENST00000301019 ST14Q9Y5Y6 855 aa14.95□□□□□ -0.02
CDT1-201ENST00000301019 KBTBD13C9JR72 458 aa14.94□□□□□ -0.02
CDT1-201ENST00000301019 H3BNX3 289 aa14.94□□□□□ -0.02
CDT1-201ENST00000301019 PSMD12O00232 456 aaPredicted RBP14.94□□□□□ -0.02
CDT1-201ENST00000301019 HMGB2P26583 209 aaKnown RBP14.94□□□□□ -0.02
CDT1-201ENST00000301019 EPHA3P29320 983 aa14.94□□□□□ -0.02
CDT1-201ENST00000301019 MXI1P50539 228 aa14.94□□□□□ -0.02
CDT1-201ENST00000301019 PDAP1Q13442 181 aaKnown RBP14.94□□□□□ -0.02
CDT1-201ENST00000301019 FGD3Q5JSP0 725 aa14.94□□□□□ -0.02
CDT1-201ENST00000301019 NANOGP8Q6NSW7 305 aa14.94□□□□□ -0.02
CDT1-201ENST00000301019 TPTE2Q6XPS3 522 aa14.94□□□□□ -0.02
CDT1-201ENST00000301019 MIER3Q7Z3K6 550 aa14.94□□□□□ -0.02
CDT1-201ENST00000301019 DDHD1Q8NEL9 900 aa14.94□□□□□ -0.02
CDT1-201ENST00000301019 ATXN7L3BQ96GX2 97 aa14.94□□□□□ -0.02
CDT1-201ENST00000301019 PKP2Q99959 881 aa14.94□□□□□ -0.02
CDT1-201ENST00000301019 NEURL2Q9BR09 285 aa14.94□□□□□ -0.02
CDT1-201ENST00000301019 HERC2P3Q9BVR0 1158 aa14.94□□□□□ -0.02
CDT1-201ENST00000301019 MRPS26Q9BYN8 205 aaKnown RBP14.94□□□□□ -0.02
CDT1-201ENST00000301019 OSBPL6Q9BZF3 934 aa14.94□□□□□ -0.02
CDT1-201ENST00000301019 CEP44Q9C0F1 390 aa14.94□□□□□ -0.02
CDT1-201ENST00000301019 JMJD4Q9H9V9 463 aa14.94□□□□□ -0.02
CDT1-201ENST00000301019 PLGRKTQ9HBL7 147 aa14.94□□□□□ -0.02
CDT1-201ENST00000301019 POU2F3Q9UKI9 436 aa14.94□□□□□ -0.02
CDT1-201ENST00000301019 KANSL1LA0AUZ9 987 aa14.94□□□□□ -0.02
CDT1-201ENST00000301019 CXorf49A8MYA2 514 aaPredicted RBP14.94□□□□□ -0.02
CDT1-201ENST00000301019 HIBADHP31937 336 aaKnown RBP14.94□□□□□ -0.02
CDT1-201ENST00000301019 BCAP31P51572 246 aa14.94□□□□□ -0.02
CDT1-201ENST00000301019 PFKPQ01813 784 aa14.94□□□□□ -0.02
CDT1-201ENST00000301019 STX3Q13277 289 aa14.94□□□□□ -0.02
CDT1-201ENST00000301019 NFIXQ14938 502 aa14.94□□□□□ -0.02
CDT1-201ENST00000301019 SF3B4Q15427 424 aaKnown RBP eCLIP14.94□□□□□ -0.021e-6■■■□□ 18.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms