RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 ITGAVP06756 1048 aa22.88■■□□□ 1.25
TPM4-201ENST00000300933 C6orf222P0C671 652 aaPredicted RBP22.88■■□□□ 1.25
TPM4-201ENST00000300933 CTCFP49711 727 aaPredicted RBP22.88■■□□□ 1.25
TPM4-201ENST00000300933 EIF3EP60228 445 aaKnown RBP22.88■■□□□ 1.25
TPM4-201ENST00000300933 NUGGCQ68CJ6 796 aa22.88■■□□□ 1.25
TPM4-201ENST00000300933 BBS12Q6ZW61 710 aa22.88■■□□□ 1.25
TPM4-201ENST00000300933 KCNV2Q8TDN2 545 aa22.88■■□□□ 1.25
TPM4-201ENST00000300933 CNPY3Q9BT09 278 aa22.88■■□□□ 1.25
TPM4-201ENST00000300933 FAM167BQ9BTA0 163 aa22.88■■□□□ 1.25
TPM4-201ENST00000300933 TMEM109Q9BVC6 243 aa22.88■■□□□ 1.25
TPM4-201ENST00000300933 NAALADL1Q9UQQ1 740 aa22.88■■□□□ 1.25
TPM4-201ENST00000300933 DRG1Q9Y295 367 aaKnown RBP22.88■■□□□ 1.25
TPM4-201ENST00000300933 ACAT1P24752 427 aaKnown RBP22.87■■□□□ 1.25
TPM4-201ENST00000300933 CTGFP29279 349 aa22.87■■□□□ 1.25
TPM4-201ENST00000300933 RPL22P35268 128 aaKnown RBP22.87■■□□□ 1.25
TPM4-201ENST00000300933 ADAM17P78536 824 aa22.87■■□□□ 1.25
TPM4-201ENST00000300933 PDIA2Q13087 525 aaKnown RBP22.87■■□□□ 1.25
TPM4-201ENST00000300933 MPP2Q14168 576 aa22.87■■□□□ 1.25
TPM4-201ENST00000300933 PPP6R3Q5H9R7 873 aaPredicted RBP22.87■■□□□ 1.25
TPM4-201ENST00000300933 UBXN11Q5T124 520 aa22.87■■□□□ 1.25
TPM4-201ENST00000300933 RNASEH2BQ5TBB1 312 aaKnown RBP22.87■■□□□ 1.25
TPM4-201ENST00000300933 DRICH1Q6PGQ1 229 aaPredicted RBP22.87■■□□□ 1.25
TPM4-201ENST00000300933 OLFML1Q6UWY5 402 aa22.87■■□□□ 1.25
TPM4-201ENST00000300933 SRRM1Q8IYB3 904 aaKnown RBP22.87■■□□□ 1.25
TPM4-201ENST00000300933 FAM172AQ8WUF8 416 aa22.87■■□□□ 1.25
TPM4-201ENST00000300933 KBTBD7Q8WVZ9 684 aa22.87■■□□□ 1.25
TPM4-201ENST00000300933 AP5M1Q9H0R1 490 aa22.87■■□□□ 1.25
TPM4-201ENST00000300933 PLEKHA5Q9HAU0 1116 aa22.87■■□□□ 1.25
TPM4-201ENST00000300933 BATF3Q9NR55 127 aa22.87■■□□□ 1.25
TPM4-201ENST00000300933 HEY1Q9Y5J3 304 aa22.87■■□□□ 1.25
TPM4-201ENST00000300933 PRPSAP2O60256 369 aa22.87■■□□□ 1.25
TPM4-201ENST00000300933 UPP2O95045 317 aa22.87■■□□□ 1.25
TPM4-201ENST00000300933 CTSHP09668 335 aa22.87■■□□□ 1.25
TPM4-201ENST00000300933 RBP3P10745 1247 aa22.87■■□□□ 1.25
TPM4-201ENST00000300933 MSS51Q4VC12 460 aa22.87■■□□□ 1.25
TPM4-201ENST00000300933 FBXO47Q5MNV8 452 aa22.87■■□□□ 1.25
TPM4-201ENST00000300933 TWF2Q6IBS0 349 aaKnown RBP22.87■■□□□ 1.25
TPM4-201ENST00000300933 GDAP1Q8TB36 358 aa22.87■■□□□ 1.25
TPM4-201ENST00000300933 SLC35F5Q8WV83 523 aa22.87■■□□□ 1.25
TPM4-201ENST00000300933 MAK16Q9BXY0 300 aaKnown RBP22.87■■□□□ 1.25
TPM4-201ENST00000300933 VPS37BQ9H9H4 285 aa22.87■■□□□ 1.25
TPM4-201ENST00000300933 HESX1Q9UBX0 185 aa22.87■■□□□ 1.25
TPM4-201ENST00000300933 KPNA7A9QM74 516 aa22.86■■□□□ 1.25
TPM4-201ENST00000300933 BBOF1Q8ND07 529 aa22.86■■□□□ 1.25
TPM4-201ENST00000300933 TMEM120BA0PK00 339 aa22.86■■□□□ 1.25
TPM4-201ENST00000300933 EME2A4GXA9 379 aaPredicted RBP22.86■■□□□ 1.25
TPM4-201ENST00000300933 PTPN7P35236 360 aa22.86■■□□□ 1.25
TPM4-201ENST00000300933 GNL1P36915 607 aaPredicted RBP22.86■■□□□ 1.25
TPM4-201ENST00000300933 PKDCCQ504Y2 493 aa22.86■■□□□ 1.25
TPM4-201ENST00000300933 TNFAIP8L3Q5GJ75 292 aa22.86■■□□□ 1.25
TPM4-201ENST00000300933 FNBP1LQ5T0N5 605 aa22.86■■□□□ 1.25
TPM4-201ENST00000300933 CAPRIN2Q6IMN6 1127 aaKnown RBP22.86■■□□□ 1.25
TPM4-201ENST00000300933 NT5DC4Q86YG4 428 aa22.86■■□□□ 1.25
TPM4-201ENST00000300933 RASAL3Q86YV0 1011 aa22.86■■□□□ 1.25
TPM4-201ENST00000300933 NETO2Q8NC67 525 aa22.86■■□□□ 1.25
TPM4-201ENST00000300933 CNTN3Q9P232 1028 aa22.86■■□□□ 1.25
TPM4-201ENST00000300933 IPPQ9Y573 584 aa22.86■■□□□ 1.25
TPM4-201ENST00000300933 ENO4A6NNW6 628 aa22.85■■□□□ 1.25
TPM4-201ENST00000300933 CLDN5O00501 218 aa22.85■■□□□ 1.25
TPM4-201ENST00000300933 PGK1P00558 417 aa22.85■■□□□ 1.25
TPM4-201ENST00000300933 DPYSL3Q14195 570 aa22.85■■□□□ 1.25
TPM4-201ENST00000300933 TMED2Q15363 201 aa22.85■■□□□ 1.25
TPM4-201ENST00000300933 FSCN1Q16658 493 aaKnown RBP22.85■■□□□ 1.25
TPM4-201ENST00000300933 SLC2A14Q8TDB8 520 aa22.85■■□□□ 1.25
TPM4-201ENST00000300933 ROPN1BQ9BZX4 212 aaPredicted RBP22.85■■□□□ 1.25
TPM4-201ENST00000300933 CCDC134Q9H6E4 229 aa22.85■■□□□ 1.25
TPM4-201ENST00000300933 ROPN1Q9HAT0 212 aaPredicted RBP22.85■■□□□ 1.25
TPM4-201ENST00000300933 ALADP13716 330 aa22.85■■□□□ 1.25
TPM4-201ENST00000300933 BASP1P80723 227 aaKnown RBP22.85■■□□□ 1.25
TPM4-201ENST00000300933 KRT81Q14533 505 aa22.85■■□□□ 1.25
TPM4-201ENST00000300933 MFSD5Q6N075 450 aa22.85■■□□□ 1.25
TPM4-201ENST00000300933 CXCL17Q6UXB2 119 aa22.85■■□□□ 1.25
TPM4-201ENST00000300933 TAOK1Q7L7X3 1001 aa22.85■■□□□ 1.25
TPM4-201ENST00000300933 SMG8Q8ND04 991 aaKnown RBP22.85■■□□□ 1.25
TPM4-201ENST00000300933 ARMC2Q8NEN0 867 aa22.85■■□□□ 1.25
TPM4-201ENST00000300933 CPT1BQ92523 772 aa22.85■■□□□ 1.25
TPM4-201ENST00000300933 SERPINB12Q96P63 405 aa22.85■■□□□ 1.25
TPM4-201ENST00000300933 ZIC5Q96T25 663 aa22.85■■□□□ 1.25
TPM4-201ENST00000300933 TNPO2O14787 897 aaKnown RBP22.85■■□□□ 1.25
TPM4-201ENST00000300933 SUN1O94901 812 aa22.85■■□□□ 1.25
TPM4-201ENST00000300933 STAU1O95793 577 aaKnown RBP22.85■■□□□ 1.25
TPM4-201ENST00000300933 RARBP10826 455 aa22.85■■□□□ 1.25
TPM4-201ENST00000300933 CCND1P24385 295 aa22.85■■□□□ 1.25
TPM4-201ENST00000300933 GRIK3Q13003 919 aa22.85■■□□□ 1.25
TPM4-201ENST00000300933 DARS2Q6PI48 645 aaKnown RBP22.85■■□□□ 1.25
TPM4-201ENST00000300933 VSTM1Q6UX27 236 aa22.85■■□□□ 1.25
TPM4-201ENST00000300933 FITM2Q8N6M3 262 aa22.85■■□□□ 1.25
TPM4-201ENST00000300933 ARHGAP39Q9C0H5 1083 aa22.85■■□□□ 1.25
TPM4-201ENST00000300933 PCDH9Q9HC56 1237 aa22.85■■□□□ 1.25
TPM4-201ENST00000300933 NR2E3Q9Y5X4 410 aa22.85■■□□□ 1.25
TPM4-201ENST00000300933 C17orf102A2RUQ5 167 aa22.84■■□□□ 1.25
TPM4-201ENST00000300933 MSH2P43246 934 aa22.84■■□□□ 1.25
TPM4-201ENST00000300933 IRX1P78414 480 aaPredicted RBP22.84■■□□□ 1.25
TPM4-201ENST00000300933 SLC6A3Q01959 620 aa22.84■■□□□ 1.25
TPM4-201ENST00000300933 ZNF483Q8TF39 744 aaPredicted RBP22.84■■□□□ 1.25
TPM4-201ENST00000300933 WNT8BQ93098 351 aa22.84■■□□□ 1.25
TPM4-201ENST00000300933 KIAA1257Q9ULG3 409 aa22.84■■□□□ 1.25
TPM4-201ENST00000300933 UBQLN1Q9UMX0 589 aaKnown RBP22.84■■□□□ 1.25
TPM4-201ENST00000300933 SYNJ2BP-COX16A0A087WUM0 186 aa22.84■■□□□ 1.25
TPM4-201ENST00000300933 EXOC1LA0A1B0GW35 172 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms