RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 ZNF560Q96MR9 790 aa15.2■□□□□ 0.02
SMG8-201ENST00000300917 TBCBQ99426 244 aa15.2■□□□□ 0.02
SMG8-201ENST00000300917 SLC4A5Q9BY07 1137 aa15.2■□□□□ 0.02
SMG8-201ENST00000300917 RSAD1Q9HA92 442 aa15.2■□□□□ 0.02
SMG8-201ENST00000300917 XPO7Q9UIA9 1087 aaKnown RBP15.2■□□□□ 0.02
SMG8-201ENST00000300917 CHMP2BQ9UQN3 213 aa15.2■□□□□ 0.02
SMG8-201ENST00000300917 APOC4-APOC2K7ER74 178 aa15.2■□□□□ 0.02
SMG8-201ENST00000300917 APOC2P02655 101 aa15.2■□□□□ 0.02
SMG8-201ENST00000300917 GNAT1P11488 350 aa15.2■□□□□ 0.02
SMG8-201ENST00000300917 MMP13P45452 471 aa15.2■□□□□ 0.02
SMG8-201ENST00000300917 MRPS6P82932 125 aaKnown RBP15.2■□□□□ 0.02
SMG8-201ENST00000300917 CDC42EP1Q00587 391 aa15.2■□□□□ 0.02
SMG8-201ENST00000300917 SPDYCQ5MJ68 293 aa15.2■□□□□ 0.02
SMG8-201ENST00000300917 C3orf58Q8NDZ4 430 aa15.2■□□□□ 0.02
SMG8-201ENST00000300917 PCDH19Q8TAB3 1148 aa15.2■□□□□ 0.02
SMG8-201ENST00000300917 THOC1Q96FV9 657 aaKnown RBP15.2■□□□□ 0.02
SMG8-201ENST00000300917 KCNK16Q96T55 309 aa15.2■□□□□ 0.02
SMG8-201ENST00000300917 KLF6Q99612 283 aaPredicted RBP15.2■□□□□ 0.02
SMG8-201ENST00000300917 PCDH18Q9HCL0 1135 aa15.2■□□□□ 0.02
SMG8-201ENST00000300917 PIH1D1Q9NWS0 290 aaKnown RBP15.2■□□□□ 0.02
SMG8-201ENST00000300917 DRG1Q9Y295 367 aaKnown RBP15.2■□□□□ 0.02
SMG8-201ENST00000300917 FAM107AO95990 144 aa15.19■□□□□ 0.02
SMG8-201ENST00000300917 CHRNA1P02708 482 aa15.19■□□□□ 0.02
SMG8-201ENST00000300917 KRT15P19012 456 aa15.19■□□□□ 0.02
SMG8-201ENST00000300917 IL4RP24394 825 aa15.19■□□□□ 0.02
SMG8-201ENST00000300917 CCND3P30281 292 aaPredicted RBP15.19■□□□□ 0.02
SMG8-201ENST00000300917 GBE1Q04446 702 aa15.19■□□□□ 0.02
SMG8-201ENST00000300917 KIAA0319Q5VV43 1072 aa15.19■□□□□ 0.02
SMG8-201ENST00000300917 TMEM110Q86TL2 294 aa15.19■□□□□ 0.02
SMG8-201ENST00000300917 DEFB106AQ8N104 65 aa15.19■□□□□ 0.02
SMG8-201ENST00000300917 ANKRD52Q8NB46 1076 aa15.19■□□□□ 0.02
SMG8-201ENST00000300917 CCDC110Q8TBZ0 833 aa15.19■□□□□ 0.02
SMG8-201ENST00000300917 RNF157Q96PX1 679 aa15.19■□□□□ 0.02
SMG8-201ENST00000300917 TSPYL2Q9H2G4 693 aaPredicted RBP15.19■□□□□ 0.02
SMG8-201ENST00000300917 RAB6BQ9NRW1 208 aa15.19■□□□□ 0.02
SMG8-201ENST00000300917 FAM105AQ9NUU6 356 aa15.19■□□□□ 0.02
SMG8-201ENST00000300917 RASA4BC9J798 803 aa15.19■□□□□ 0.02
SMG8-201ENST00000300917 F8W810 466 aa15.19■□□□□ 0.02
SMG8-201ENST00000300917 RASA4O43374 803 aa15.19■□□□□ 0.02
SMG8-201ENST00000300917 YY1P25490 414 aa15.19■□□□□ 0.02
SMG8-201ENST00000300917 BCAT1P54687 386 aa15.19■□□□□ 0.02
SMG8-201ENST00000300917 DSTYKQ6XUX3 929 aa15.19■□□□□ 0.02
SMG8-201ENST00000300917 HFE2Q6ZVN8 426 aa15.19■□□□□ 0.02
SMG8-201ENST00000300917 LRRC34Q8IZ02 419 aa15.19■□□□□ 0.02
SMG8-201ENST00000300917 FUKQ8N0W3 1084 aa15.19■□□□□ 0.02
SMG8-201ENST00000300917 PLD5Q8N7P1 536 aa15.19■□□□□ 0.02
SMG8-201ENST00000300917 PYROXD1Q8WU10 500 aa15.19■□□□□ 0.02
SMG8-201ENST00000300917 TRIM56Q9BRZ2 755 aaKnown RBP15.19■□□□□ 0.02
SMG8-201ENST00000300917 DDX43Q9NXZ2 648 aaKnown RBP15.19■□□□□ 0.02
SMG8-201ENST00000300917 DERAQ9Y315 318 aa15.19■□□□□ 0.02
SMG8-201ENST00000300917 GOLGA8RI6L899 631 aa15.19■□□□□ 0.02
SMG8-201ENST00000300917 STAU1O95793 577 aaKnown RBP15.19■□□□□ 0.02
SMG8-201ENST00000300917 PCK1P35558 622 aa15.19■□□□□ 0.02
SMG8-201ENST00000300917 SV2CQ496J9 727 aa15.19■□□□□ 0.02
SMG8-201ENST00000300917 CENPUQ71F23 418 aa15.19■□□□□ 0.02
SMG8-201ENST00000300917 SOCS4Q8WXH5 440 aa15.19■□□□□ 0.02
SMG8-201ENST00000300917 SENP8Q96LD8 212 aa15.19■□□□□ 0.02
SMG8-201ENST00000300917 ETNK2Q9NVF9 386 aa15.19■□□□□ 0.02
SMG8-201ENST00000300917 DDX20Q9UHI6 824 aaKnown RBP15.19■□□□□ 0.02
SMG8-201ENST00000300917 NOD1Q9Y239 953 aa15.19■□□□□ 0.02
SMG8-201ENST00000300917 CREB3O43889 395 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 DUSP11O75319 330 aaKnown RBP15.18■□□□□ 0.02
SMG8-201ENST00000300917 ASGR1P07306 291 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 AMPD1P23109 780 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 ANKRD20A8PQ5CZ79 823 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 TAOK1Q7L7X3 1001 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.18■□□□□ 0.02
SMG8-201ENST00000300917 PQLC3Q8N755 202 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 TTC13Q8NBP0 860 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 FBXO36Q8NEA4 188 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 FAF2Q96CS3 445 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 ELAC2Q9BQ52 826 aaKnown RBP15.18■□□□□ 0.02
SMG8-201ENST00000300917 CCDC77Q9BR77 488 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 MTG1Q9BT17 334 aaPredicted RBP15.18■□□□□ 0.02
SMG8-201ENST00000300917 TRMT13Q9NUP7 481 aaKnown RBP15.18■□□□□ 0.02
SMG8-201ENST00000300917 MYBPHLA2RUH7 354 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 XPOTO43592 962 aaKnown RBP15.18■□□□□ 0.02
SMG8-201ENST00000300917 SLC10A3P09131 477 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 CYP2F1P24903 491 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 SULT1E1P49888 294 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 MORF4L2Q15014 288 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 STILQ15468 1287 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 PKN2Q16513 984 aaKnown RBP15.18■□□□□ 0.02
SMG8-201ENST00000300917 ERMARDQ5T6L9 678 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 EMC10Q5UCC4 262 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 DRICH1Q6PGQ1 229 aaPredicted RBP15.18■□□□□ 0.02
SMG8-201ENST00000300917 MAP7D3Q8IWC1 876 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 TSPYL1Q9H0U9 437 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 C12orf65Q9H3J6 166 aaKnown RBP15.18■□□□□ 0.02
SMG8-201ENST00000300917 LRRC4Q9HBW1 653 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 XPNPEP3Q9NQH7 507 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 KRT82Q9NSB4 513 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 GTF2IRD1Q9UHL9 959 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 APOL1O14791 398 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 ZBED1O96006 694 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 GOT1P17174 413 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 PTPN1P18031 435 aaKnown RBP15.18■□□□□ 0.02
SMG8-201ENST00000300917 AXLP30530 894 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 CACNA2D1P54289 1103 aa15.18■□□□□ 0.02
SMG8-201ENST00000300917 SYPL2Q5VXT5 272 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms