RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 STILQ15468 1287 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 USP39Q53GS9 565 aaKnown RBP5.74□□□□□ -1.49
CPSF2-201ENST00000298875 UBE2Q1Q7Z7E8 422 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 SCUBE1Q8IWY4 988 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 TMEM120AQ9BXJ8 343 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 LOC100653049A0A140TA62 436 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 MEI4A8MW99 385 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 KRT34O76011 436 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 CTSHP09668 335 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 ITGB3BPQ13352 177 aaPredicted RBP5.74□□□□□ -1.49
CPSF2-201ENST00000298875 NR1I3Q14994 352 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 PKN2Q16513 984 aaKnown RBP5.74□□□□□ -1.49
CPSF2-201ENST00000298875 RABL6Q3YEC7 729 aaPredicted RBP5.74□□□□□ -1.49
CPSF2-201ENST00000298875 CCNI2Q6ZMN8 369 aaPredicted RBP5.74□□□□□ -1.49
CPSF2-201ENST00000298875 MIEF2Q96C03 454 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 TDRD3Q9H7E2 651 aaKnown RBP5.74□□□□□ -1.49
CPSF2-201ENST00000298875 NMRK2Q9NPI5 230 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 CRLS1Q9UJA2 301 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 ATF5Q9Y2D1 282 aaPredicted RBP5.74□□□□□ -1.49
CPSF2-201ENST00000298875 TULP4Q9NRJ4 1543 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 LCA5LO95447 670 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 NFICP08651 508 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 FNTAP49354 379 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 WASHC2DQ5SRD0 308 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 ZNF614Q8N883 585 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 GRPEL2Q8TAA5 225 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 TMEM143Q96AN5 459 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 EFCAB1Q9HAE3 211 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 SPATA2Q9UM82 520 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 PCDHA10Q9Y5I2 948 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 STON1Q9Y6Q2 735 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.73□□□□□ -1.49
CPSF2-201ENST00000298875 COMTP21964 271 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 EIF2B2P49770 351 aaKnown RBP5.73□□□□□ -1.49
CPSF2-201ENST00000298875 DDX39BQ13838 428 aaKnown RBP5.73□□□□□ -1.49
CPSF2-201ENST00000298875 TRIQKQ629K1 86 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 ZNF57Q68EA5 555 aaPredicted RBP5.73□□□□□ -1.49
CPSF2-201ENST00000298875 KDM7AQ6ZMT4 941 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 ERP44Q9BS26 406 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 A1CFQ9NQ94 594 aaKnown RBP5.73□□□□□ -1.49
CPSF2-201ENST00000298875 INTS13Q9NVM9 706 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 SLIT1O75093 1534 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 KIF20BQ96Q89 1820 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 SOAT2O75908 522 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 HNRNPH1P31943 449 aaKnown RBP5.73□□□□□ -1.49
CPSF2-201ENST00000298875 EMC2Q15006 297 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 TCHHL1Q5QJ38 904 aaPredicted RBP5.73□□□□□ -1.49
CPSF2-201ENST00000298875 ARID3BQ8IVW6 561 aaPredicted RBP5.73□□□□□ -1.49
CPSF2-201ENST00000298875 FAM136AQ96C01 138 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 ROPN1BQ9BZX4 212 aaPredicted RBP5.73□□□□□ -1.49
CPSF2-201ENST00000298875 MMADHCQ9H3L0 296 aaPredicted RBP5.73□□□□□ -1.49
CPSF2-201ENST00000298875 ROPN1Q9HAT0 212 aaPredicted RBP5.73□□□□□ -1.49
CPSF2-201ENST00000298875 VTA1Q9NP79 307 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 TMCC3Q9ULS5 477 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 PADI4Q9UM07 663 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 PSMD14O00487 310 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 ATP6V1G2O95670 118 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 PBLDP30039 288 aaPredicted RBP5.73□□□□□ -1.49
CPSF2-201ENST00000298875 TYW3Q6IPR3 259 aaKnown RBP5.73□□□□□ -1.49
CPSF2-201ENST00000298875 ERAP2Q6P179 960 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 ZFP1Q6P2D0 407 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 ILKAPQ9H0C8 392 aaPredicted RBP5.73□□□□□ -1.49
CPSF2-201ENST00000298875 MAN1C1Q9NR34 630 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 KLHL1Q9NR64 748 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 WDR35Q9P2L0 1181 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 ZNF609O15014 1411 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 C2orf81A6NN90 581 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 SERPINH1P50454 418 aaKnown RBP5.73□□□□□ -1.49
CPSF2-201ENST00000298875 STX5Q13190 355 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 ATP6AP1LQ52LC2 224 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 C10orf120Q5SQS8 335 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 KLHL24Q6TFL4 600 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 TDRD5Q8NAT2 981 aaKnown RBP5.73□□□□□ -1.49
CPSF2-201ENST00000298875 SCFD2Q8WU76 684 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 RMND5BQ96G75 393 aaPredicted RBP5.73□□□□□ -1.49
CPSF2-201ENST00000298875 SERPINB12Q96P63 405 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 C6orf62Q9GZU0 229 aaPredicted RBP5.73□□□□□ -1.49
CPSF2-201ENST00000298875 ISCUQ9H1K1 167 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 ZFYVE1Q9HBF4 777 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 F8W810 466 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 SNPHO15079 494 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 ALDH1A2O94788 518 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 ZSWIM7Q19AV6 140 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 PDZK1Q5T2W1 519 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 AGAP9Q5VTM2 703 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 SDE2Q6IQ49 451 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 IRGCQ6NXR0 463 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 KLHL17Q6TDP4 642 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 KCTD14Q9BQ13 255 aaPredicted RBP5.73□□□□□ -1.49
CPSF2-201ENST00000298875 NT5C1AQ9BXI3 368 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 PLGRKTQ9HBL7 147 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 AVENQ9NQS1 362 aaPredicted RBP5.73□□□□□ -1.49
CPSF2-201ENST00000298875 CCDC59Q9P031 241 aaKnown RBP5.73□□□□□ -1.49
CPSF2-201ENST00000298875 TAGLN3Q9UI15 199 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 CENPXA8MT69 81 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 BAIAP3O94812 1187 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 CNTN1Q12860 1018 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 R3HDM1Q15032 1099 aaKnown RBP5.73□□□□□ -1.49
CPSF2-201ENST00000298875 LDHDQ86WU2 507 aa5.73□□□□□ -1.49
CPSF2-201ENST00000298875 NOA1Q8NC60 698 aaKnown RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms