RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 OTUD1Q5VV17 481 aaPredicted RBP26.79■■□□□ 1.88
SDCCAG3-201ENST00000298537 SYPL2Q5VXT5 272 aa26.79■■□□□ 1.88
SDCCAG3-201ENST00000298537 RHBDF2Q6PJF5 856 aa26.79■■□□□ 1.88
SDCCAG3-201ENST00000298537 CCDC185Q8N715 623 aa26.79■■□□□ 1.88
SDCCAG3-201ENST00000298537 MYCBPAPQ8TBZ2 947 aa26.79■■□□□ 1.88
SDCCAG3-201ENST00000298537 SNF8Q96H20 258 aa26.79■■□□□ 1.88
SDCCAG3-201ENST00000298537 PCDH10Q9P2E7 1040 aa26.79■■□□□ 1.88
SDCCAG3-201ENST00000298537 TSC2P49815 1807 aa26.79■■□□□ 1.88
SDCCAG3-201ENST00000298537 SYNJ2BP-COX16A0A087WUM0 186 aa26.79■■□□□ 1.88
SDCCAG3-201ENST00000298537 SHBGP04278 402 aa26.79■■□□□ 1.88
SDCCAG3-201ENST00000298537 SELPP16109 830 aa26.79■■□□□ 1.88
SDCCAG3-201ENST00000298537 MRPS5P82675 430 aaKnown RBP26.79■■□□□ 1.88
SDCCAG3-201ENST00000298537 CALCOCO2Q13137 446 aa26.79■■□□□ 1.88
SDCCAG3-201ENST00000298537 ALLCQ8N6M5 410 aa26.79■■□□□ 1.88
SDCCAG3-201ENST00000298537 ULBP1Q9BZM6 244 aa26.79■■□□□ 1.88
SDCCAG3-201ENST00000298537 LRRC4Q9HBW1 653 aa26.79■■□□□ 1.88
SDCCAG3-201ENST00000298537 COX16Q9P0S2 106 aa26.79■■□□□ 1.88
SDCCAG3-201ENST00000298537 CDH9Q9ULB4 789 aa26.79■■□□□ 1.88
SDCCAG3-201ENST00000298537 PQBP1O60828 265 aaKnown RBP26.78■■□□□ 1.88
SDCCAG3-201ENST00000298537 FAM163BP0C2L3 166 aa26.78■■□□□ 1.88
SDCCAG3-201ENST00000298537 ZNF844Q08AG5 666 aa26.78■■□□□ 1.88
SDCCAG3-201ENST00000298537 TAB3Q8N5C8 712 aaPredicted RBP26.78■■□□□ 1.88
SDCCAG3-201ENST00000298537 DDX23Q9BUQ8 820 aaKnown RBP26.78■■□□□ 1.88
SDCCAG3-201ENST00000298537 UBN1Q9NPG3 1134 aa26.78■■□□□ 1.88
SDCCAG3-201ENST00000298537 WHRNQ9P202 907 aa26.78■■□□□ 1.88
SDCCAG3-201ENST00000298537 M0QZQ0 153 aa26.78■■□□□ 1.88
SDCCAG3-201ENST00000298537 IFNB1P01574 187 aa26.78■■□□□ 1.88
SDCCAG3-201ENST00000298537 SKIP12755 728 aa26.78■■□□□ 1.88
SDCCAG3-201ENST00000298537 PMS2P54278 862 aa26.78■■□□□ 1.88
SDCCAG3-201ENST00000298537 BCAR1P56945 870 aa26.78■■□□□ 1.88
SDCCAG3-201ENST00000298537 SNX16P57768 344 aa26.78■■□□□ 1.88
SDCCAG3-201ENST00000298537 P3H1Q32P28 736 aa26.78■■□□□ 1.88
SDCCAG3-201ENST00000298537 DCAF6Q58WW2 860 aa26.78■■□□□ 1.88
SDCCAG3-201ENST00000298537 GLB1LQ6UWU2 654 aa26.78■■□□□ 1.88
SDCCAG3-201ENST00000298537 CENPIQ92674 756 aaPredicted RBP26.78■■□□□ 1.88
SDCCAG3-201ENST00000298537 PCDH18Q9HCL0 1135 aa26.78■■□□□ 1.88
SDCCAG3-201ENST00000298537 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP26.78■■□□□ 1.88
SDCCAG3-201ENST00000298537 PRG3Q9Y2Y8 225 aaPredicted RBP26.78■■□□□ 1.88
SDCCAG3-201ENST00000298537 OR4Q2P0C623 313 aa26.77■■□□□ 1.88
SDCCAG3-201ENST00000298537 BDNFP23560 247 aa26.77■■□□□ 1.88
SDCCAG3-201ENST00000298537 PTPN9P43378 593 aa26.77■■□□□ 1.88
SDCCAG3-201ENST00000298537 FAM189BP81408 668 aa26.77■■□□□ 1.88
SDCCAG3-201ENST00000298537 KRT81Q14533 505 aa26.77■■□□□ 1.88
SDCCAG3-201ENST00000298537 PPP6R3Q5H9R7 873 aaPredicted RBP26.77■■□□□ 1.88
SDCCAG3-201ENST00000298537 DRICH1Q6PGQ1 229 aaPredicted RBP26.77■■□□□ 1.88
SDCCAG3-201ENST00000298537 PYROXD2Q8N2H3 581 aa26.77■■□□□ 1.88
SDCCAG3-201ENST00000298537 SCLYQ96I15 445 aa26.77■■□□□ 1.88
SDCCAG3-201ENST00000298537 CYLDQ9NQC7 956 aa26.77■■□□□ 1.88
SDCCAG3-201ENST00000298537 TBC1D13Q9NVG8 400 aa26.77■■□□□ 1.88
SDCCAG3-201ENST00000298537 FEZ2Q9UHY8 353 aaPredicted RBP26.77■■□□□ 1.88
SDCCAG3-201ENST00000298537 LAMA2P24043 3122 aaKnown RBP26.77■■□□□ 1.88
SDCCAG3-201ENST00000298537 YJEFN3A6XGL0 299 aa26.77■■□□□ 1.88
SDCCAG3-201ENST00000298537 E7ENQ6 273 aa26.77■■□□□ 1.88
SDCCAG3-201ENST00000298537 SLC8A3P57103 927 aa26.77■■□□□ 1.88
SDCCAG3-201ENST00000298537 SYDE1Q6ZW31 735 aaPredicted RBP26.77■■□□□ 1.88
SDCCAG3-201ENST00000298537 FAM131BQ86XD5 332 aa26.77■■□□□ 1.88
SDCCAG3-201ENST00000298537 NKD2Q969F2 451 aaPredicted RBP26.77■■□□□ 1.88
SDCCAG3-201ENST00000298537 ADAM7Q9H2U9 754 aa26.77■■□□□ 1.88
SDCCAG3-201ENST00000298537 PAK6Q9NQU5 681 aaPredicted RBP26.77■■□□□ 1.88
SDCCAG3-201ENST00000298537 SAGE1Q9NXZ1 904 aa26.77■■□□□ 1.88
SDCCAG3-201ENST00000298537 HHLA1C9JL84 531 aa26.76■■□□□ 1.87
SDCCAG3-201ENST00000298537 SGK1O00141 431 aa26.76■■□□□ 1.87
SDCCAG3-201ENST00000298537 DNM1LO00429 736 aa26.76■■□□□ 1.87
SDCCAG3-201ENST00000298537 FYNP06241 537 aa26.76■■□□□ 1.87
SDCCAG3-201ENST00000298537 USP17L7P0C7H9 530 aa26.76■■□□□ 1.87
SDCCAG3-201ENST00000298537 PRMT2P55345 433 aa26.76■■□□□ 1.87
SDCCAG3-201ENST00000298537 PPARDQ03181 441 aa26.76■■□□□ 1.87
SDCCAG3-201ENST00000298537 GABPB1Q06547 395 aaPredicted RBP26.76■■□□□ 1.87
SDCCAG3-201ENST00000298537 ARHGEF6Q15052 776 aa26.76■■□□□ 1.87
SDCCAG3-201ENST00000298537 DNAJC21Q5F1R6 531 aaKnown RBP26.76■■□□□ 1.87
SDCCAG3-201ENST00000298537 NOMO2Q5JPE7 1267 aa26.76■■□□□ 1.87
SDCCAG3-201ENST00000298537 IZUMO3Q5VZ72 239 aa26.76■■□□□ 1.87
SDCCAG3-201ENST00000298537 C1orf228Q6PIY5 440 aa26.76■■□□□ 1.87
SDCCAG3-201ENST00000298537 SIX6OS1Q8N1H7 587 aa26.76■■□□□ 1.87
SDCCAG3-201ENST00000298537 PQLC3Q8N755 202 aa26.76■■□□□ 1.87
SDCCAG3-201ENST00000298537 ADAM32Q8TC27 787 aa26.76■■□□□ 1.87
SDCCAG3-201ENST00000298537 KCTD13Q8WZ19 329 aa26.76■■□□□ 1.87
SDCCAG3-201ENST00000298537 NAALADL1Q9UQQ1 740 aa26.76■■□□□ 1.87
SDCCAG3-201ENST00000298537 EFR3BQ9Y2G0 817 aa26.76■■□□□ 1.87
SDCCAG3-201ENST00000298537 INPPL1O15357 1258 aa26.76■■□□□ 1.87
SDCCAG3-201ENST00000298537 ITIH2P19823 946 aa26.76■■□□□ 1.87
SDCCAG3-201ENST00000298537 MATKP42679 507 aa26.76■■□□□ 1.87
SDCCAG3-201ENST00000298537 DSC1Q08554 894 aa26.76■■□□□ 1.87
SDCCAG3-201ENST00000298537 OVOS1Q6IE37 1185 aa26.76■■□□□ 1.87
SDCCAG3-201ENST00000298537 DCLRE1AQ6PJP8 1040 aa26.76■■□□□ 1.87
SDCCAG3-201ENST00000298537 UNC45BQ8IWX7 931 aa26.76■■□□□ 1.87
SDCCAG3-201ENST00000298537 GOLGA6L1Q8N7Z2 621 aa26.76■■□□□ 1.87
SDCCAG3-201ENST00000298537 PCDH19Q8TAB3 1148 aa26.76■■□□□ 1.87
SDCCAG3-201ENST00000298537 PKMYT1Q99640 499 aa26.76■■□□□ 1.87
SDCCAG3-201ENST00000298537 DNAI2Q9GZS0 605 aa26.76■■□□□ 1.87
SDCCAG3-201ENST00000298537 RNF208Q9H0X6 261 aa26.76■■□□□ 1.87
SDCCAG3-201ENST00000298537 MTRF1LQ9UGC7 380 aaKnown RBP26.76■■□□□ 1.87
SDCCAG3-201ENST00000298537 EOMESO95936 686 aa26.75■■□□□ 1.87
SDCCAG3-201ENST00000298537 CYP11A1P05108 521 aa26.75■■□□□ 1.87
SDCCAG3-201ENST00000298537 OR1G1P47890 313 aa26.75■■□□□ 1.87
SDCCAG3-201ENST00000298537 SULT1E1P49888 294 aa26.75■■□□□ 1.87
SDCCAG3-201ENST00000298537 INTS6LQ5JSJ4 861 aaKnown RBP26.75■■□□□ 1.87
SDCCAG3-201ENST00000298537 EFHC1Q5JVL4 640 aa26.75■■□□□ 1.87
SDCCAG3-201ENST00000298537 ZC3H18Q86VM9 953 aaKnown RBP26.75■■□□□ 1.87
SDCCAG3-201ENST00000298537 COLGALT2Q8IYK4 626 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms