RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 KREMEN2Q8NCW0 462 aa6.26□□□□□ -1.41
SSX3-201ENST00000298396 CCDC150Q8NCX0 1101 aa6.26□□□□□ -1.41
SSX3-201ENST00000298396 ANKRD20A12PQ8NF67 263 aa6.26□□□□□ -1.41
SSX3-201ENST00000298396 MYCBPAPQ8TBZ2 947 aa6.26□□□□□ -1.41
SSX3-201ENST00000298396 SLC2A14Q8TDB8 520 aa6.26□□□□□ -1.41
SSX3-201ENST00000298396 SLC20A1Q8WUM9 679 aa6.26□□□□□ -1.41
SSX3-201ENST00000298396 DDX1Q92499 740 aaKnown RBP6.26□□□□□ -1.41
SSX3-201ENST00000298396 GTPBP3Q969Y2 492 aaKnown RBP6.26□□□□□ -1.41
SSX3-201ENST00000298396 ZNF707Q96C28 371 aaPredicted RBP6.26□□□□□ -1.41
SSX3-201ENST00000298396 TMEM176AQ96HP8 235 aa6.26□□□□□ -1.41
SSX3-201ENST00000298396 MSLNLQ96KJ4 702 aa6.26□□□□□ -1.41
SSX3-201ENST00000298396 CDCA3Q99618 268 aaPredicted RBP6.26□□□□□ -1.41
SSX3-201ENST00000298396 SMOQ99835 787 aa6.26□□□□□ -1.41
SSX3-201ENST00000298396 NT5C1AQ9BXI3 368 aa6.26□□□□□ -1.41
SSX3-201ENST00000298396 EMILIN2Q9BXX0 1053 aa6.26□□□□□ -1.41
SSX3-201ENST00000298396 LRRC3Q9BY71 257 aa6.26□□□□□ -1.41
SSX3-201ENST00000298396 STK33Q9BYT3 514 aa6.26□□□□□ -1.41
SSX3-201ENST00000298396 S1PR5Q9H228 398 aa6.26□□□□□ -1.41
SSX3-201ENST00000298396 FAM124BQ9H5Z6 455 aaPredicted RBP6.26□□□□□ -1.41
SSX3-201ENST00000298396 CYTH4Q9UIA0 394 aa6.26□□□□□ -1.41
SSX3-201ENST00000298396 SSX2IPQ9Y2D8 614 aa6.26□□□□□ -1.41
SSX3-201ENST00000298396 R3HCC1Q9Y3T6 440 aaKnown RBP6.26□□□□□ -1.41
SSX3-201ENST00000298396 COL4A3Q01955 1670 aa6.26□□□□□ -1.41
SSX3-201ENST00000298396 BDP1A6H8Y1 2624 aa6.26□□□□□ -1.41
SSX3-201ENST00000298396 ITIH6Q6UXX5 1313 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 TICRRQ7Z2Z1 1910 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 C1RP00736 705 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 TPM2P07951 284 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 PAEPP09466 180 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 HAPLN1P10915 354 aaPredicted RBP6.25□□□□□ -1.41
SSX3-201ENST00000298396 ATF2P15336 505 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 BDNFP23560 247 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 MPSTP25325 297 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 ADORA2BP29275 332 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 SOX5P35711 763 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 IDH3AP50213 366 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 MFAP3P55082 362 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 TPM4P67936 248 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 TSPY1Q01534 308 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 MTMR3Q13615 1198 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 RAPGEF1Q13905 1077 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 DDR2Q16832 855 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 UVSSAQ2YD98 709 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 CFAP221Q4G0U5 840 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 FILIP1LQ4L180 1135 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 TPGS2Q68CL5 300 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 ARHGAP17Q68EM7 881 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 ANKRD54Q6NXT1 300 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 DENND1BQ6P3S1 775 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 CLEC20AQ6ZU45 233 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 ENOSF1Q7L5Y1 443 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 IRF2BP2Q7Z5L9 587 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 NOP9Q86U38 636 aaKnown RBP6.25□□□□□ -1.41
SSX3-201ENST00000298396 TREML1Q86YW5 311 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 DCP1BQ8IZD4 617 aaKnown RBP6.25□□□□□ -1.41
SSX3-201ENST00000298396 NEK11Q8NG66 645 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 SLC7A14Q8TBB6 771 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 GPR152Q8TDT2 470 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 JAKMIP2Q96AA8 810 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 ZNF775Q96BV0 537 aaPredicted RBP6.25□□□□□ -1.41
SSX3-201ENST00000298396 PABPC5Q96DU9 382 aaKnown RBP6.25□□□□□ -1.41
SSX3-201ENST00000298396 HEXIM2Q96MH2 286 aaKnown RBP6.25□□□□□ -1.41
SSX3-201ENST00000298396 HNRNPABQ99729 332 aaKnown RBP6.25□□□□□ -1.41
SSX3-201ENST00000298396 SYT11Q9BT88 431 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 OXCT2Q9BYC2 517 aaPredicted RBP6.25□□□□□ -1.41
SSX3-201ENST00000298396 ZNF334Q9HCZ1 680 aaPredicted RBP6.25□□□□□ -1.41
SSX3-201ENST00000298396 ABCB6Q9NP58 842 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 KRT82Q9NSB4 513 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 HCFC1R1Q9NWW0 138 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 ABI2Q9NYB9 513 aaPredicted RBP6.25□□□□□ -1.41
SSX3-201ENST00000298396 NOCTQ9UK39 431 aaKnown RBP6.25□□□□□ -1.41
SSX3-201ENST00000298396 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.25□□□□□ -1.41
SSX3-201ENST00000298396 YIPF1Q9Y548 306 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 PCDHB5Q9Y5E4 795 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 INSL5Q9Y5Q6 135 aa6.25□□□□□ -1.41
SSX3-201ENST00000298396 MYO18AQ92614 2054 aaKnown RBP6.24□□□□□ -1.41
SSX3-201ENST00000298396 ATG2BQ96BY7 2078 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 A0A1W2PQJ5 194 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 FAM170AA1A519 330 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 LRRC53A6NM62 1247 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 F8VP50 259 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 H3BQ06 376 aaPredicted RBP6.24□□□□□ -1.41
SSX3-201ENST00000298396 CCL16O15467 120 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 MOSPD3O75425 235 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 TADA3O75528 432 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 GFPT2O94808 682 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 C8AP07357 584 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 VDRP11473 427 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 KRT5P13647 590 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 HMGA1P17096 107 aaKnown RBP6.24□□□□□ -1.41
SSX3-201ENST00000298396 GNA15P30679 374 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 CASP14P31944 242 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 USP8P40818 1118 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 CCR2P41597 374 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 MAGEA11P43364 429 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 EIF1AXP47813 144 aaKnown RBP6.24□□□□□ -1.41
SSX3-201ENST00000298396 PGFP49763 221 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 ARSDP51689 593 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 YWHAEP62258 255 aaKnown RBP6.24□□□□□ -1.41
SSX3-201ENST00000298396 NTHL1P78549 312 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms