RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 IL1R2P27930 398 aa16.23■□□□□ 0.19
UBAP1-201ENST00000297661 ZNF132P52740 706 aa16.23■□□□□ 0.19
UBAP1-201ENST00000297661 DEUP1Q05D60 604 aa16.23■□□□□ 0.19
UBAP1-201ENST00000297661 TAF5Q15542 800 aa16.23■□□□□ 0.19
UBAP1-201ENST00000297661 LY6KQ17RY6 165 aa16.23■□□□□ 0.19
UBAP1-201ENST00000297661 MSS51Q4VC12 460 aa16.23■□□□□ 0.19
UBAP1-201ENST00000297661 CFAP157Q5JU67 520 aa16.23■□□□□ 0.19
UBAP1-201ENST00000297661 DPH6Q7L8W6 267 aa16.23■□□□□ 0.19
UBAP1-201ENST00000297661 TRAPPC12Q8WVT3 735 aa16.23■□□□□ 0.19
UBAP1-201ENST00000297661 RHBDL2Q9NX52 303 aa16.23■□□□□ 0.19
UBAP1-201ENST00000297661 PCDHGA4Q9Y5G9 962 aa16.23■□□□□ 0.19
UBAP1-201ENST00000297661 ADCY3O60266 1144 aa16.22■□□□□ 0.19
UBAP1-201ENST00000297661 CSDE1O75534 798 aaKnown RBP16.22■□□□□ 0.19
UBAP1-201ENST00000297661 KRT19P08727 400 aa16.22■□□□□ 0.19
UBAP1-201ENST00000297661 ADRA1DP25100 572 aa16.22■□□□□ 0.19
UBAP1-201ENST00000297661 CDKN2BP42772 138 aa16.22■□□□□ 0.19
UBAP1-201ENST00000297661 RGMBQ6NW40 437 aa16.22■□□□□ 0.19
UBAP1-201ENST00000297661 CCDC62Q6P9F0 684 aa16.22■□□□□ 0.19
UBAP1-201ENST00000297661 CATSPERGQ6ZRH7 1159 aa16.22■□□□□ 0.19
UBAP1-201ENST00000297661 SPATA24Q86W54 205 aa16.22■□□□□ 0.19
UBAP1-201ENST00000297661 TDRPQ86YL5 185 aa16.22■□□□□ 0.19
UBAP1-201ENST00000297661 KIAA0319LQ8IZA0 1049 aa16.22■□□□□ 0.19
UBAP1-201ENST00000297661 PPP1R16BQ96T49 567 aa16.22■□□□□ 0.19
UBAP1-201ENST00000297661 MAK16Q9BXY0 300 aaKnown RBP16.22■□□□□ 0.19
UBAP1-201ENST00000297661 TRIM55Q9BYV6 548 aa16.22■□□□□ 0.19
UBAP1-201ENST00000297661 CYTH4Q9UIA0 394 aa16.22■□□□□ 0.19
UBAP1-201ENST00000297661 BLOC1S6Q9UL45 172 aa16.22■□□□□ 0.19
UBAP1-201ENST00000297661 CNTN6Q9UQ52 1028 aa16.22■□□□□ 0.19
UBAP1-201ENST00000297661 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.22■□□□□ 0.19
UBAP1-201ENST00000297661 PFDN1O60925 122 aa16.22■□□□□ 0.19
UBAP1-201ENST00000297661 LDHAP00338 332 aaKnown RBP16.22■□□□□ 0.19
UBAP1-201ENST00000297661 ASLP04424 464 aa16.22■□□□□ 0.19
UBAP1-201ENST00000297661 PABPC4LP0CB38 370 aaKnown RBP16.22■□□□□ 0.19
UBAP1-201ENST00000297661 PSMA2P25787 234 aa16.22■□□□□ 0.19
UBAP1-201ENST00000297661 VCPP55072 806 aaKnown RBP16.22■□□□□ 0.19
UBAP1-201ENST00000297661 TRPC3Q13507 836 aa16.22■□□□□ 0.19
UBAP1-201ENST00000297661 TFDP3Q5H9I0 405 aa16.22■□□□□ 0.19
UBAP1-201ENST00000297661 RNASEH2BQ5TBB1 312 aaKnown RBP16.22■□□□□ 0.19
UBAP1-201ENST00000297661 RNF149Q8NC42 400 aa16.22■□□□□ 0.19
UBAP1-201ENST00000297661 ACTL9Q8TC94 416 aa16.22■□□□□ 0.19
UBAP1-201ENST00000297661 AS3MTQ9HBK9 375 aa16.22■□□□□ 0.19
UBAP1-201ENST00000297661 ALG13Q9NP73 1137 aaKnown RBP16.22■□□□□ 0.19
UBAP1-201ENST00000297661 RLFQ13129 1914 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 hCG_2014768A0A024R1R8 64 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 TCRBV7S3A2A0A539 114 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 TCRBV5S1A1TA0A578 114 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 B4GALT5O43286 388 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 RARBP10826 455 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 VAV1P15498 845 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 STAT5BP51692 787 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 ARFIP2P53365 341 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 SH3BGRP55822 239 aaPredicted RBP16.21■□□□□ 0.19
UBAP1-201ENST00000297661 OTUD4Q01804 1114 aaKnown RBP16.21■□□□□ 0.19
UBAP1-201ENST00000297661 CDC16Q13042 620 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 TFDP1Q14186 410 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 MAP7Q14244 749 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 OASLQ15646 514 aaKnown RBP16.21■□□□□ 0.19
UBAP1-201ENST00000297661 DEFB115Q30KQ5 88 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 PTPN20Q4JDL3 420 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 FNBP1LQ5T0N5 605 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 TMEM192Q8IY95 271 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 ARFGAP1Q8N6T3 406 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 TMEM35BQ8NCS4 154 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 PPP2R3CQ969Q6 453 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 ADAMTS5Q9UNA0 930 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 CST8O60676 142 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 OPHN1O60890 802 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 ATP6V1G1O75348 118 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 PIGRP01833 764 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 CALB1P05937 261 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 KRT4P19013 534 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 CRABP2P29373 138 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 TCF7P36402 384 aaPredicted RBP16.21■□□□□ 0.19
UBAP1-201ENST00000297661 CPA2P48052 419 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 GPX6P59796 221 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 TMEM132AQ24JP5 1023 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 TTC7BQ86TV6 843 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 BRSK2Q8IWQ3 736 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 ARHGAP24Q8N264 748 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 NME8Q8N427 588 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 UBR7Q8N806 425 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 SKA1Q96BD8 255 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 CYTH2Q99418 400 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 TTC1Q99614 292 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 CREBZFQ9NS37 354 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 NDE1Q9NXR1 346 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 ZNF510Q9Y2H8 683 aa16.21■□□□□ 0.19
UBAP1-201ENST00000297661 PARP14Q460N5 1801 aa16.21■□□□□ 0.18
UBAP1-201ENST00000297661 PHIPQ8WWQ0 1821 aa16.2■□□□□ 0.18
UBAP1-201ENST00000297661 FAM189A1O60320 539 aa16.2■□□□□ 0.18
UBAP1-201ENST00000297661 MSCO60682 206 aa16.2■□□□□ 0.18
UBAP1-201ENST00000297661 FARP2O94887 1054 aaPredicted RBP16.2■□□□□ 0.18
UBAP1-201ENST00000297661 BAG2O95816 211 aa16.2■□□□□ 0.18
UBAP1-201ENST00000297661 ZNF699Q32M78 642 aa16.2■□□□□ 0.18
UBAP1-201ENST00000297661 TREML2Q5T2D2 321 aa16.2■□□□□ 0.18
UBAP1-201ENST00000297661 RASAL3Q86YV0 1011 aa16.2■□□□□ 0.18
UBAP1-201ENST00000297661 NIF3L1Q9GZT8 377 aa16.2■□□□□ 0.18
UBAP1-201ENST00000297661 EBF3Q9H4W6 596 aa16.2■□□□□ 0.18
UBAP1-201ENST00000297661 PAPPA2Q9BXP8 1791 aa16.2■□□□□ 0.18
UBAP1-201ENST00000297661 F8W8V4 182 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms