RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 MAP3K13O43283 966 aa11.24□□□□□ -0.61
RFC4-201ENST00000296273 GCNT3O95395 438 aa11.24□□□□□ -0.61
RFC4-201ENST00000296273 APODP05090 189 aa11.24□□□□□ -0.61
RFC4-201ENST00000296273 SKILP12757 684 aa11.24□□□□□ -0.61
RFC4-201ENST00000296273 RDXP35241 583 aaKnown RBP11.24□□□□□ -0.61
RFC4-201ENST00000296273 WNT7BP56706 349 aa11.24□□□□□ -0.61
RFC4-201ENST00000296273 NOP14P78316 857 aaKnown RBP11.24□□□□□ -0.61
RFC4-201ENST00000296273 PAK1Q13153 545 aa11.24□□□□□ -0.61
RFC4-201ENST00000296273 SURF1Q15526 300 aa11.24□□□□□ -0.61
RFC4-201ENST00000296273 SOWAHAQ2M3V2 549 aa11.24□□□□□ -0.61
RFC4-201ENST00000296273 GAB4Q2WGN9 574 aa11.24□□□□□ -0.61
RFC4-201ENST00000296273 PREPLQ4J6C6 727 aaPredicted RBP11.24□□□□□ -0.61
RFC4-201ENST00000296273 DNTTIP2Q5QJE6 756 aaKnown RBP11.24□□□□□ -0.61
RFC4-201ENST00000296273 CDKAL1Q5VV42 579 aa11.24□□□□□ -0.61
RFC4-201ENST00000296273 ISM2Q6H9L7 571 aa11.24□□□□□ -0.61
RFC4-201ENST00000296273 SLC23A3Q6PIS1 610 aa11.24□□□□□ -0.61
RFC4-201ENST00000296273 TMEM92Q6UXU6 159 aa11.24□□□□□ -0.61
RFC4-201ENST00000296273 SV2BQ7L1I2 683 aa11.24□□□□□ -0.61
RFC4-201ENST00000296273 DDX42Q86XP3 938 aaKnown RBP eCLIP11.24□□□□□ -0.61
RFC4-201ENST00000296273 SYCP3Q8IZU3 236 aa11.24□□□□□ -0.61
RFC4-201ENST00000296273 CCDC33Q8N5R6 958 aa11.24□□□□□ -0.61
RFC4-201ENST00000296273 DEFB124Q8NES8 71 aa11.24□□□□□ -0.61
RFC4-201ENST00000296273 SAAL1Q96ER3 474 aa11.24□□□□□ -0.61
RFC4-201ENST00000296273 TTLL2Q9BWV7 592 aa11.24□□□□□ -0.61
RFC4-201ENST00000296273 TBC1D14Q9P2M4 693 aa11.24□□□□□ -0.61
RFC4-201ENST00000296273 NEUROG3Q9Y4Z2 214 aa11.24□□□□□ -0.61
RFC4-201ENST00000296273 NUP205Q92621 2012 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 LAMA1P25391 3075 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 ATG2BQ96BY7 2078 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.23□□□□□ -0.61
RFC4-201ENST00000296273 A0A1B0GTH6 734 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 H0Y626 953 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 TRIM16O95361 564 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 FGFR1OPO95684 399 aaKnown RBP11.23□□□□□ -0.61
RFC4-201ENST00000296273 OLFM2O95897 454 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 ADH1CP00326 375 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 CYP17A1P05093 508 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 TPM1P09493 284 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 SPINK2P20155 84 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 BDNFP23560 247 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 GRIA2P42262 883 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 TNFRSF4P43489 277 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 ZXDBP98169 803 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 KCNA1Q09470 495 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 TRIM14Q14142 442 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 DHCR24Q15392 516 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 PEAR1Q5VY43 1037 aaPredicted RBP11.23□□□□□ -0.61
RFC4-201ENST00000296273 SPECC1LQ69YQ0 1117 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 NUDT18Q6ZVK8 323 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 TMC6Q7Z403 805 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 TRMT11Q7Z4G4 463 aaKnown RBP11.23□□□□□ -0.61
RFC4-201ENST00000296273 LIMS2Q7Z4I7 341 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 RABEPKQ7Z6M1 372 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 FILIP1Q7Z7B0 1213 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 TTC30AQ86WT1 665 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 FAM114A1Q8IWE2 563 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 GPD1LQ8N335 351 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 ALLCQ8N6M5 410 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 IL17RCQ8NAC3 791 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 TXNDC5Q8NBS9 432 aaKnown RBP11.23□□□□□ -0.61
RFC4-201ENST00000296273 CEP76Q8TAP6 659 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 KCNV2Q8TDN2 545 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 MYLPFQ96A32 169 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 OTUB2Q96DC9 234 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 ZNF830Q96NB3 372 aaPredicted RBP11.23□□□□□ -0.61
RFC4-201ENST00000296273 SLITRK1Q96PX8 696 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 MTMR12Q9C0I1 747 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 IKZF4Q9H2S9 585 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 INTS13Q9NVM9 706 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 BCCIPQ9P287 314 aaKnown RBP eCLIP11.23□□□□□ -0.61
RFC4-201ENST00000296273 LIMA1Q9UHB6 759 aaKnown RBP11.23□□□□□ -0.61
RFC4-201ENST00000296273 SIX4Q9UIU6 781 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 PAXBP1Q9Y5B6 917 aa11.23□□□□□ -0.61
RFC4-201ENST00000296273 CNOT1A5YKK6 2376 aaKnown RBP11.23□□□□□ -0.61
RFC4-201ENST00000296273 SDK1Q7Z5N4 2213 aa11.22□□□□□ -0.61
RFC4-201ENST00000296273 HELZP42694 1942 aaKnown RBP11.22□□□□□ -0.61
RFC4-201ENST00000296273 ANAPC1Q9H1A4 1944 aa11.22□□□□□ -0.61
RFC4-201ENST00000296273 ZNF840PA6NDX5 716 aa11.22□□□□□ -0.61
RFC4-201ENST00000296273 GOLGA6L9A6NEM1 432 aa11.22□□□□□ -0.61
RFC4-201ENST00000296273 SRRM3A6NNA2 597 aaPredicted RBP11.22□□□□□ -0.61
RFC4-201ENST00000296273 KIF20AO95235 890 aa11.22□□□□□ -0.61
RFC4-201ENST00000296273 KAT7O95251 611 aa11.22□□□□□ -0.61
RFC4-201ENST00000296273 KLF8O95600 359 aaPredicted RBP11.22□□□□□ -0.61
RFC4-201ENST00000296273 TNNC2P02585 160 aa11.22□□□□□ -0.61
RFC4-201ENST00000296273 ENGP17813 658 aa11.22□□□□□ -0.61
RFC4-201ENST00000296273 WARSP23381 471 aaKnown RBP11.22□□□□□ -0.61
RFC4-201ENST00000296273 LMO2P25791 158 aa11.22□□□□□ -0.61
RFC4-201ENST00000296273 EEF1GP26641 437 aaKnown RBP11.22□□□□□ -0.61
RFC4-201ENST00000296273 TIE1P35590 1138 aa11.22□□□□□ -0.61
RFC4-201ENST00000296273 ATXN3P54252 364 aaPredicted RBP11.22□□□□□ -0.61
RFC4-201ENST00000296273 PSMC1P62191 440 aaKnown RBP11.22□□□□□ -0.61
RFC4-201ENST00000296273 CYP27A1Q02318 531 aa11.22□□□□□ -0.61
RFC4-201ENST00000296273 HNRNPDQ14103 355 aaKnown RBP11.22□□□□□ -0.61
RFC4-201ENST00000296273 NR1I3Q14994 352 aa11.22□□□□□ -0.61
RFC4-201ENST00000296273 CCDC142Q17RM4 750 aa11.22□□□□□ -0.61
RFC4-201ENST00000296273 TDRD10Q5VZ19 366 aaKnown RBP11.22□□□□□ -0.61
RFC4-201ENST00000296273 LYSMD4Q5XG99 296 aa11.22□□□□□ -0.61
RFC4-201ENST00000296273 GRAMD1CQ8IYS0 662 aa11.22□□□□□ -0.61
RFC4-201ENST00000296273 HDDC3Q8N4P3 179 aa11.22□□□□□ -0.61
RFC4-201ENST00000296273 ZSWIM2Q8NEG5 633 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms