RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 GCOM2Q9BZD3 368 aaPredicted RBP12.28□□□□□ -0.44
RHO-201ENST00000296271 GGA2Q9UJY4 613 aa12.28□□□□□ -0.44
RHO-201ENST00000296271 MYL3P08590 195 aa12.28□□□□□ -0.44
RHO-201ENST00000296271 ABHD2P08910 425 aa12.28□□□□□ -0.44
RHO-201ENST00000296271 DARSP14868 501 aaKnown RBP12.28□□□□□ -0.44
RHO-201ENST00000296271 NDUFV1P49821 464 aa12.28□□□□□ -0.44
RHO-201ENST00000296271 SLC6A3Q01959 620 aa12.28□□□□□ -0.44
RHO-201ENST00000296271 ROR1Q01973 937 aa12.28□□□□□ -0.44
RHO-201ENST00000296271 SPRYD7Q5W111 196 aa12.28□□□□□ -0.44
RHO-201ENST00000296271 ALKAL1Q6UXT8 129 aa12.28□□□□□ -0.44
RHO-201ENST00000296271 TLK2Q86UE8 772 aa12.28□□□□□ -0.44
RHO-201ENST00000296271 SLC4A5Q9BY07 1137 aa12.28□□□□□ -0.44
RHO-201ENST00000296271 CEP41Q9BYV8 373 aa12.28□□□□□ -0.44
RHO-201ENST00000296271 RSAD1Q9HA92 442 aa12.28□□□□□ -0.44
RHO-201ENST00000296271 RAB6BQ9NRW1 208 aa12.28□□□□□ -0.44
RHO-201ENST00000296271 GNEQ9Y223 722 aaKnown RBP12.28□□□□□ -0.44
RHO-201ENST00000296271 LAMA2P24043 3122 aaKnown RBP12.27□□□□□ -0.44
RHO-201ENST00000296271 FAM47DPA6NHR8 397 aa12.27□□□□□ -0.44
RHO-201ENST00000296271 KBTBD13C9JR72 458 aa12.27□□□□□ -0.44
RHO-201ENST00000296271 HOXD8P13378 290 aaPredicted RBP12.27□□□□□ -0.44
RHO-201ENST00000296271 CA4P22748 312 aa12.27□□□□□ -0.44
RHO-201ENST00000296271 PCK1P35558 622 aa12.27□□□□□ -0.44
RHO-201ENST00000296271 SNX17Q15036 470 aa12.27□□□□□ -0.44
RHO-201ENST00000296271 UBXN11Q5T124 520 aa12.27□□□□□ -0.44
RHO-201ENST00000296271 TRPM8Q7Z2W7 1104 aa12.27□□□□□ -0.44
RHO-201ENST00000296271 ZNF410Q86VK4 478 aa12.27□□□□□ -0.44
RHO-201ENST00000296271 OSTM1Q86WC4 334 aa12.27□□□□□ -0.44
RHO-201ENST00000296271 TP53INP2Q8IXH6 220 aa12.27□□□□□ -0.44
RHO-201ENST00000296271 CCHCR1Q8TD31 782 aa12.27□□□□□ -0.44
RHO-201ENST00000296271 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.27□□□□□ -0.44
RHO-201ENST00000296271 DENND1AQ8TEH3 1009 aa12.27□□□□□ -0.44
RHO-201ENST00000296271 PAFAH2Q99487 392 aa12.27□□□□□ -0.44
RHO-201ENST00000296271 DHX35Q9H5Z1 703 aaKnown RBP12.27□□□□□ -0.44
RHO-201ENST00000296271 NKIRAS1Q9NYS0 192 aa12.27□□□□□ -0.44
RHO-201ENST00000296271 SLC17A7Q9P2U7 560 aa12.27□□□□□ -0.44
RHO-201ENST00000296271 ZMYND8Q9ULU4 1186 aaPredicted RBP12.27□□□□□ -0.44
RHO-201ENST00000296271 MYADML2A6NDP7 307 aa12.27□□□□□ -0.45
RHO-201ENST00000296271 A6NJR5 290 aa12.27□□□□□ -0.45
RHO-201ENST00000296271 IGF2BP3O00425 579 aaKnown RBP eCLIP12.27□□□□□ -0.45
RHO-201ENST00000296271 UGT1A9O60656 530 aa12.27□□□□□ -0.45
RHO-201ENST00000296271 ASMTLO95671 621 aa12.27□□□□□ -0.45
RHO-201ENST00000296271 SDC4P31431 198 aa12.27□□□□□ -0.45
RHO-201ENST00000296271 ARL4CP56559 192 aa12.27□□□□□ -0.45
RHO-201ENST00000296271 MFSD10Q14728 455 aa12.27□□□□□ -0.45
RHO-201ENST00000296271 NOTUMQ6P988 496 aa12.27□□□□□ -0.45
RHO-201ENST00000296271 ZNF467Q7Z7K2 595 aaPredicted RBP12.27□□□□□ -0.45
RHO-201ENST00000296271 ANKRD23Q86SG2 305 aa12.27□□□□□ -0.45
RHO-201ENST00000296271 TMEM110Q86TL2 294 aa12.27□□□□□ -0.45
RHO-201ENST00000296271 PALM2Q8IXS6 379 aa12.27□□□□□ -0.45
RHO-201ENST00000296271 KIF2BQ8N4N8 673 aa12.27□□□□□ -0.45
RHO-201ENST00000296271 FITM2Q8N6M3 262 aa12.27□□□□□ -0.45
RHO-201ENST00000296271 FAF2Q96CS3 445 aa12.27□□□□□ -0.45
RHO-201ENST00000296271 CFAP36Q96G28 342 aa12.27□□□□□ -0.45
RHO-201ENST00000296271 UGT1A7Q9HAW7 530 aa12.27□□□□□ -0.45
RHO-201ENST00000296271 UGT1A10Q9HAW8 530 aa12.27□□□□□ -0.45
RHO-201ENST00000296271 UGT1A8Q9HAW9 530 aa12.27□□□□□ -0.45
RHO-201ENST00000296271 PLAC1Q9HBJ0 212 aa12.27□□□□□ -0.45
RHO-201ENST00000296271 EFR3BQ9Y2G0 817 aa12.27□□□□□ -0.45
RHO-201ENST00000296271 TIMM13Q9Y5L4 95 aaPredicted RBP12.27□□□□□ -0.45
RHO-201ENST00000296271 F2P00734 622 aa12.26□□□□□ -0.45
RHO-201ENST00000296271 AMHP03971 560 aa12.26□□□□□ -0.45
RHO-201ENST00000296271 ADRA1DP25100 572 aa12.26□□□□□ -0.45
RHO-201ENST00000296271 ATP5DP30049 168 aa12.26□□□□□ -0.45
RHO-201ENST00000296271 IQSEC1Q6DN90 963 aa12.26□□□□□ -0.45
RHO-201ENST00000296271 FAM131BQ86XD5 332 aa12.26□□□□□ -0.45
RHO-201ENST00000296271 TTC13Q8NBP0 860 aa12.26□□□□□ -0.45
RHO-201ENST00000296271 TBCBQ99426 244 aa12.26□□□□□ -0.45
RHO-201ENST00000296271 CD248Q9HCU0 757 aa12.26□□□□□ -0.45
RHO-201ENST00000296271 USP15Q9Y4E8 981 aaPredicted RBP12.26□□□□□ -0.45
RHO-201ENST00000296271 LOC102724159A0A0B4J2E5 919 aa12.26□□□□□ -0.45
RHO-201ENST00000296271 CXorf49A8MYA2 514 aaPredicted RBP12.26□□□□□ -0.45
RHO-201ENST00000296271 KPNA7A9QM74 516 aa12.26□□□□□ -0.45
RHO-201ENST00000296271 RASSF9O75901 435 aa12.26□□□□□ -0.45
RHO-201ENST00000296271 METTL18O95568 372 aa12.26□□□□□ -0.45
RHO-201ENST00000296271 ZNF865P0CJ78 1059 aaPredicted RBP12.26□□□□□ -0.45
RHO-201ENST00000296271 AMPD1P23109 780 aa12.26□□□□□ -0.45
RHO-201ENST00000296271 GNL1P36915 607 aaPredicted RBP12.26□□□□□ -0.45
RHO-201ENST00000296271 BCAR1P56945 870 aa12.26□□□□□ -0.45
RHO-201ENST00000296271 KCNJ11Q14654 390 aa12.26□□□□□ -0.45
RHO-201ENST00000296271 PWP2Q15269 919 aaKnown RBP12.26□□□□□ -0.45
RHO-201ENST00000296271 KBTBD12Q3ZCT8 623 aa12.26□□□□□ -0.45
RHO-201ENST00000296271 EFHC2Q5JST6 749 aa12.26□□□□□ -0.45
RHO-201ENST00000296271 FBXO47Q5MNV8 452 aa12.26□□□□□ -0.45
RHO-201ENST00000296271 SPATA21Q7Z572 469 aa12.26□□□□□ -0.45
RHO-201ENST00000296271 TBC1D1Q86TI0 1168 aaPredicted RBP12.26□□□□□ -0.45
RHO-201ENST00000296271 MPP5Q8N3R9 675 aa12.26□□□□□ -0.45
RHO-201ENST00000296271 ANKS4BQ8N8V4 417 aa12.26□□□□□ -0.45
RHO-201ENST00000296271 CCDC63Q8NA47 563 aa12.26□□□□□ -0.45
RHO-201ENST00000296271 SMG8Q8ND04 991 aaKnown RBP12.26□□□□□ -0.45
RHO-201ENST00000296271 BEST2Q8NFU1 509 aa12.26□□□□□ -0.45
RHO-201ENST00000296271 DCAKDQ8WVC6 231 aa12.26□□□□□ -0.45
RHO-201ENST00000296271 MTMR10Q9NXD2 777 aa12.26□□□□□ -0.45
RHO-201ENST00000296271 HESX1Q9UBX0 185 aa12.26□□□□□ -0.45
RHO-201ENST00000296271 MRPL42Q9Y6G3 142 aaKnown RBP12.26□□□□□ -0.45
RHO-201ENST00000296271 TCRBV9S1A1TA0A576 114 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 TYROBPO43914 113 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 APRTP07741 180 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 CYP2F1P24903 491 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 L1CAMP32004 1257 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 GEMIN4P57678 1058 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms