RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 P4HA2O15460 535 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 RFC2P35250 354 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 SPRP35270 261 aaPredicted RBP12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 COPAP53621 1224 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 PSRC1Q6PGN9 363 aaPredicted RBP12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 DDHD1Q8NEL9 900 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 CAVIN3Q969G5 261 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 SLC37A4O43826 429 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 MYO1DO94832 1006 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 WDR47O94967 919 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 RARGP13631 454 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 FPGSQ05932 587 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 MRPL28Q13084 256 aaKnown RBP12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 C4orf22Q6V702 233 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 GALNT4Q8N4A0 578 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 DIS3LQ8TF46 1054 aaKnown RBP12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 ZBTB10Q96DT7 871 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 TRIM45Q9H8W5 580 aaPredicted RBP12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 OLFML3Q9NRN5 406 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 PCMTD2Q9NV79 361 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 PLXNB2O15031 1838 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 E5RI56 91 aa12.27□□□□□ -0.44
SYNGAP1-201ENST00000293748 NEMP1O14524 444 aa12.27□□□□□ -0.44
SYNGAP1-201ENST00000293748 PFKMP08237 780 aa12.27□□□□□ -0.44
SYNGAP1-201ENST00000293748 SLC9A1P19634 815 aa12.27□□□□□ -0.44
SYNGAP1-201ENST00000293748 NLRP9Q7RTR0 991 aa12.27□□□□□ -0.44
SYNGAP1-201ENST00000293748 SLC13A5Q86YT5 568 aaPredicted RBP12.27□□□□□ -0.44
SYNGAP1-201ENST00000293748 RNF135Q8IUD6 432 aa12.27□□□□□ -0.44
SYNGAP1-201ENST00000293748 SCFD1Q8WVM8 642 aa12.27□□□□□ -0.44
SYNGAP1-201ENST00000293748 PGBD4Q96DM1 585 aa12.27□□□□□ -0.44
SYNGAP1-201ENST00000293748 TSPAN17Q96FV3 270 aa12.27□□□□□ -0.44
SYNGAP1-201ENST00000293748 C20orf96Q9NUD7 363 aaPredicted RBP12.27□□□□□ -0.44
SYNGAP1-201ENST00000293748 RAB21Q9UL25 225 aa12.27□□□□□ -0.44
SYNGAP1-201ENST00000293748 RSPH10B2B2RC85 870 aa12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 PSMD3O43242 534 aa12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 RSPH10BP0C881 870 aa12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 LBRQ14739 615 aaKnown RBP12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 STILQ15468 1287 aa12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 KLHDC7AQ5VTJ3 777 aa12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 FAM43BQ6ZT52 329 aaPredicted RBP12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 MAGEB18Q96M61 343 aa12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 KATNBL1Q9H079 304 aa12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 TMEM117Q9H0C3 514 aa12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 PHTF1Q9UMS5 762 aa12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 CHMP2BQ9UQN3 213 aa12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 PCDHB2Q9Y5E7 798 aa12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 ZNF236Q9UL36 1845 aa12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 IGLV3-22A0A075B6J6 115 aa12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 DGAT1O75907 488 aa12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 SELPP16109 830 aa12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 TARSP26639 723 aaKnown RBP12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 YWHABP31946 246 aaKnown RBP12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 KCNJ1P48048 391 aa12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 GEMIN4P57678 1058 aaKnown RBP12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 TTC39BQ5VTQ0 682 aaPredicted RBP12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 EP400NLQ6ZTU2 488 aa12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 ARID3BQ8IVW6 561 aaPredicted RBP12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 TPCN2Q8NHX9 752 aa12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 TRIM62Q9BVG3 475 aa12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 HSPBP1Q9NZL4 362 aa12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 GTF2IRD1Q9UHL9 959 aa12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 PCDHGB4Q9UN71 923 aa12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 SLC8A2Q9UPR5 921 aa12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 PSMD10O75832 226 aa12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 CTSHP09668 335 aa12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 GFAPP14136 432 aa12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 RUNX1T1Q06455 604 aa12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 ITGB3BPQ13352 177 aaPredicted RBP12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 C4orf19Q8IY42 314 aa12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 CYGBQ8WWM9 190 aa12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 LZICQ8WZA0 190 aa12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 EGFL8Q99944 293 aa12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 TRIM54Q9BYV2 358 aa12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 ADAM33Q9BZ11 813 aa12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 KCNMB3Q9NPA1 279 aa12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 PAPOLBQ9NRJ5 636 aaKnown RBP12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 NSMCE4AQ9NXX6 385 aa12.27□□□□□ -0.45
SYNGAP1-201ENST00000293748 KIAA0100Q14667 2235 aaKnown RBP12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 A0A1B0GW55 424 aa12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 MYADML2A6NDP7 307 aa12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 XPO1O14980 1071 aaKnown RBP12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 ATP9BO43861 1147 aa12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 DUX4L2P0CJ85 424 aa12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 DUX4L3P0CJ86 424 aa12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 DUX4L4P0CJ87 422 aa12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 DUX4L5P0CJ88 424 aa12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 DUX4L6P0CJ89 424 aa12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 DUX4L7P0CJ90 424 aa12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 FXR2P51116 673 aaKnown RBP eCLIP12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 CCDC85BQ15834 202 aaPredicted RBP12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 TRIM16LQ309B1 348 aa12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 STX19Q8N4C7 294 aa12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 SLC30A5Q8TAD4 765 aa12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 RMDN2Q96LZ7 410 aa12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 POLR3FQ9H1D9 316 aaPredicted RBP12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 AIPL1Q9NZN9 384 aa12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 HACD3Q9P035 362 aa12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 DUX4Q9UBX2 424 aa12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 NAGPAQ9UK23 515 aa12.26□□□□□ -0.45
SYNGAP1-201ENST00000293748 GTF3C4Q9UKN8 822 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms