RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 PTPRN2Q92932 1015 aa20.78■□□□□ 0.92
SCUBE1-201ENST00000290460 UTP4Q969X6 686 aaKnown RBP20.78■□□□□ 0.92
SCUBE1-201ENST00000290460 CFAP36Q96G28 342 aa20.78■□□□□ 0.92
SCUBE1-201ENST00000290460 C16orf70Q9BSU1 422 aa20.78■□□□□ 0.92
SCUBE1-201ENST00000290460 CENPFP49454 3210 aa20.78■□□□□ 0.92
SCUBE1-201ENST00000290460 MYO18AQ92614 2054 aaKnown RBP20.78■□□□□ 0.92
SCUBE1-201ENST00000290460 A0A1B0GUA9 196 aa20.78■□□□□ 0.92
SCUBE1-201ENST00000290460 HCRTO43612 131 aa20.78■□□□□ 0.92
SCUBE1-201ENST00000290460 FAM155BO75949 473 aa20.78■□□□□ 0.92
SCUBE1-201ENST00000290460 ALADP13716 330 aa20.78■□□□□ 0.92
SCUBE1-201ENST00000290460 EZRP15311 586 aaKnown RBP20.78■□□□□ 0.92
SCUBE1-201ENST00000290460 FAAP100Q0VG06 881 aa20.78■□□□□ 0.92
SCUBE1-201ENST00000290460 PPP6R3Q5H9R7 873 aaPredicted RBP20.78■□□□□ 0.92
SCUBE1-201ENST00000290460 SMYD5Q6GMV2 418 aa20.78■□□□□ 0.92
SCUBE1-201ENST00000290460 PRPF39Q86UA1 669 aaKnown RBP20.78■□□□□ 0.92
SCUBE1-201ENST00000290460 PPP1R13LQ8WUF5 828 aa20.78■□□□□ 0.92
SCUBE1-201ENST00000290460 CYLDQ9NQC7 956 aa20.78■□□□□ 0.92
SCUBE1-201ENST00000290460 SMAPO00193 183 aa20.77■□□□□ 0.92
SCUBE1-201ENST00000290460 GABBR2O75899 941 aa20.77■□□□□ 0.92
SCUBE1-201ENST00000290460 SKIV2L2P42285 1042 aaKnown RBP20.77■□□□□ 0.92
SCUBE1-201ENST00000290460 ZNF449Q6P9G9 518 aa20.77■□□□□ 0.92
SCUBE1-201ENST00000290460 CCDC125Q86Z20 511 aa20.77■□□□□ 0.92
SCUBE1-201ENST00000290460 CCDC33Q8N5R6 958 aa20.77■□□□□ 0.92
SCUBE1-201ENST00000290460 PCDH19Q8TAB3 1148 aa20.77■□□□□ 0.92
SCUBE1-201ENST00000290460 KHSRPQ92945 711 aaKnown RBP eCLIP20.77■□□□□ 0.92
SCUBE1-201ENST00000290460 ZMAT2Q96NC0 199 aaKnown RBP20.77■□□□□ 0.92
SCUBE1-201ENST00000290460 SNRNP25Q9BV90 132 aaKnown RBP20.77■□□□□ 0.92
SCUBE1-201ENST00000290460 MAGEB5Q9BZ81 275 aa20.77■□□□□ 0.92
SCUBE1-201ENST00000290460 MIS12Q9H081 205 aa20.77■□□□□ 0.92
SCUBE1-201ENST00000290460 PCDH18Q9HCL0 1135 aa20.77■□□□□ 0.92
SCUBE1-201ENST00000290460 TXLNGQ9NUQ3 528 aa20.77■□□□□ 0.92
SCUBE1-201ENST00000290460 DCTN4Q9UJW0 460 aa20.77■□□□□ 0.92
SCUBE1-201ENST00000290460 NUMBLQ9Y6R0 609 aa20.77■□□□□ 0.92
SCUBE1-201ENST00000290460 MT-ND3P03897 115 aa20.76■□□□□ 0.91
SCUBE1-201ENST00000290460 GJA5P36382 358 aa20.76■□□□□ 0.91
SCUBE1-201ENST00000290460 MAP2K2P36507 400 aa20.76■□□□□ 0.91
SCUBE1-201ENST00000290460 BCAR1P56945 870 aa20.76■□□□□ 0.91
SCUBE1-201ENST00000290460 ZNF200P98182 395 aaPredicted RBP20.76■□□□□ 0.91
SCUBE1-201ENST00000290460 KIZQ2M2Z5 673 aa20.76■□□□□ 0.91
SCUBE1-201ENST00000290460 PPTC7Q8NI37 304 aa20.76■□□□□ 0.91
SCUBE1-201ENST00000290460 MCM8Q9UJA3 840 aa20.76■□□□□ 0.91
SCUBE1-201ENST00000290460 HES2Q9Y543 173 aa20.76■□□□□ 0.91
SCUBE1-201ENST00000290460 IKBKGQ9Y6K9 419 aa20.76■□□□□ 0.91
SCUBE1-201ENST00000290460 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.76■□□□□ 0.91
SCUBE1-201ENST00000290460 H3BRB1 525 aa20.76■□□□□ 0.91
SCUBE1-201ENST00000290460 APOL1O14791 398 aa20.76■□□□□ 0.91
SCUBE1-201ENST00000290460 LPXNO60711 386 aa20.76■□□□□ 0.91
SCUBE1-201ENST00000290460 CBX6O95503 412 aa20.76■□□□□ 0.91
SCUBE1-201ENST00000290460 ADORA2AP29274 412 aa20.76■□□□□ 0.91
SCUBE1-201ENST00000290460 ALDH3A1P30838 453 aa20.76■□□□□ 0.91
SCUBE1-201ENST00000290460 YWHAZP63104 245 aaKnown RBP20.76■□□□□ 0.91
SCUBE1-201ENST00000290460 GLRA4Q5JXX5 417 aa20.76■□□□□ 0.91
SCUBE1-201ENST00000290460 MARCH8Q5T0T0 291 aa20.76■□□□□ 0.91
SCUBE1-201ENST00000290460 FASTKD5Q7L8L6 764 aaKnown RBP20.76■□□□□ 0.91
SCUBE1-201ENST00000290460 MAP7D3Q8IWC1 876 aa20.76■□□□□ 0.91
SCUBE1-201ENST00000290460 SLC44A1Q8WWI5 657 aa20.76■□□□□ 0.91
SCUBE1-201ENST00000290460 TUT1Q9H6E5 874 aaKnown RBP20.76■□□□□ 0.91
SCUBE1-201ENST00000290460 TUBGCP4Q9UGJ1 667 aa20.76■□□□□ 0.91
SCUBE1-201ENST00000290460 PLXNB2O15031 1838 aa20.76■□□□□ 0.91
SCUBE1-201ENST00000290460 TM9SF1O15321 606 aa20.75■□□□□ 0.91
SCUBE1-201ENST00000290460 CHADO15335 359 aa20.75■□□□□ 0.91
SCUBE1-201ENST00000290460 PAPSS1O43252 624 aaPredicted RBP20.75■□□□□ 0.91
SCUBE1-201ENST00000290460 DCTN3O75935 186 aa20.75■□□□□ 0.91
SCUBE1-201ENST00000290460 NPTXRO95502 500 aa20.75■□□□□ 0.91
SCUBE1-201ENST00000290460 INHBAP08476 426 aa20.75■□□□□ 0.91
SCUBE1-201ENST00000290460 SDC4P31431 198 aa20.75■□□□□ 0.91
SCUBE1-201ENST00000290460 ATXN1P54253 815 aaKnown RBP20.75■□□□□ 0.91
SCUBE1-201ENST00000290460 PKDCCQ504Y2 493 aa20.75■□□□□ 0.91
SCUBE1-201ENST00000290460 PLCD3Q8N3E9 789 aa20.75■□□□□ 0.91
SCUBE1-201ENST00000290460 RFWD2Q8NHY2 731 aa20.75■□□□□ 0.91
SCUBE1-201ENST00000290460 CCDC110Q8TBZ0 833 aa20.75■□□□□ 0.91
SCUBE1-201ENST00000290460 CLEC4CQ8WTT0 213 aa20.75■□□□□ 0.91
SCUBE1-201ENST00000290460 FAM111AQ96PZ2 611 aa20.75■□□□□ 0.91
SCUBE1-201ENST00000290460 SNTG2Q9NY99 539 aa20.75■□□□□ 0.91
SCUBE1-201ENST00000290460 ZBED1O96006 694 aa20.75■□□□□ 0.91
SCUBE1-201ENST00000290460 APRTP07741 180 aa20.75■□□□□ 0.91
SCUBE1-201ENST00000290460 T-ENOLP0DO92 83 aa20.75■□□□□ 0.91
SCUBE1-201ENST00000290460 PYGBP11216 843 aa20.75■□□□□ 0.91
SCUBE1-201ENST00000290460 NLRP9Q7RTR0 991 aa20.75■□□□□ 0.91
SCUBE1-201ENST00000290460 LRRC6Q86X45 466 aa20.75■□□□□ 0.91
SCUBE1-201ENST00000290460 TRIM56Q9BRZ2 755 aaKnown RBP20.75■□□□□ 0.91
SCUBE1-201ENST00000290460 DPEP3Q9H4B8 488 aa20.75■□□□□ 0.91
SCUBE1-201ENST00000290460 MANSC1Q9H8J5 431 aa20.75■□□□□ 0.91
SCUBE1-201ENST00000290460 PAK5Q9P286 719 aa20.75■□□□□ 0.91
SCUBE1-201ENST00000290460 KIAA1257Q9ULG3 409 aa20.75■□□□□ 0.91
SCUBE1-201ENST00000290460 DNAH12Q6ZR08 3092 aa20.74■□□□□ 0.91
SCUBE1-201ENST00000290460 IQANK1A0A1B0GTG1 560 aa20.74■□□□□ 0.91
SCUBE1-201ENST00000290460 HDAC4P56524 1084 aa20.74■□□□□ 0.91
SCUBE1-201ENST00000290460 SLC6A3Q01959 620 aa20.74■□□□□ 0.91
SCUBE1-201ENST00000290460 PDK2Q15119 407 aa20.74■□□□□ 0.91
SCUBE1-201ENST00000290460 GRIK4Q16099 956 aa20.74■□□□□ 0.91
SCUBE1-201ENST00000290460 BOLA3Q53S33 107 aa20.74■□□□□ 0.91
SCUBE1-201ENST00000290460 TAF1BQ53T94 588 aaPredicted RBP20.74■□□□□ 0.91
SCUBE1-201ENST00000290460 CTAGE3PQ8IX95 158 aa20.74■□□□□ 0.91
SCUBE1-201ENST00000290460 C18orf25Q96B23 403 aaPredicted RBP20.74■□□□□ 0.91
SCUBE1-201ENST00000290460 RNF181Q9P0P0 153 aa20.74■□□□□ 0.91
SCUBE1-201ENST00000290460 KANSL3Q9P2N6 904 aa20.74■□□□□ 0.91
SCUBE1-201ENST00000290460 CXorf49A8MYA2 514 aaPredicted RBP20.74■□□□□ 0.91
SCUBE1-201ENST00000290460 STAU1O95793 577 aaKnown RBP20.74■□□□□ 0.91
SCUBE1-201ENST00000290460 TSHRP16473 764 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms