RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 RTN3O95197 1032 aaPredicted RBP9.68□□□□□ -0.86
HMGN1-201ENST00000288344 CALCAP01258 141 aa9.68□□□□□ -0.86
HMGN1-201ENST00000288344 VDRP11473 427 aa9.68□□□□□ -0.86
HMGN1-201ENST00000288344 AOC1P19801 751 aa9.68□□□□□ -0.86
HMGN1-201ENST00000288344 YWHAQP27348 245 aa9.68□□□□□ -0.86
HMGN1-201ENST00000288344 TUBP50607 506 aa9.68□□□□□ -0.86
HMGN1-201ENST00000288344 IQCB1Q15051 598 aa9.68□□□□□ -0.86
HMGN1-201ENST00000288344 KLHL40Q2TBA0 621 aa9.68□□□□□ -0.86
HMGN1-201ENST00000288344 GAB4Q2WGN9 574 aa9.68□□□□□ -0.86
HMGN1-201ENST00000288344 PIGZQ86VD9 579 aa9.68□□□□□ -0.86
HMGN1-201ENST00000288344 SCML4Q8N228 414 aa9.68□□□□□ -0.86
HMGN1-201ENST00000288344 WDTC1Q8N5D0 677 aa9.68□□□□□ -0.86
HMGN1-201ENST00000288344 CELF5Q8N6W0 485 aaKnown RBP9.68□□□□□ -0.86
HMGN1-201ENST00000288344 ARL14EPQ8N8R7 260 aaPredicted RBP9.68□□□□□ -0.86
HMGN1-201ENST00000288344 FAM200AQ8TCP9 573 aa9.68□□□□□ -0.86
HMGN1-201ENST00000288344 SHC3Q92529 594 aa9.68□□□□□ -0.86
HMGN1-201ENST00000288344 DNASE1L2Q92874 299 aa9.68□□□□□ -0.86
HMGN1-201ENST00000288344 CLDN23Q96B33 292 aa9.68□□□□□ -0.86
HMGN1-201ENST00000288344 HEXIM2Q96MH2 286 aaKnown RBP9.68□□□□□ -0.86
HMGN1-201ENST00000288344 TUBGCP2Q9BSJ2 902 aa9.68□□□□□ -0.86
HMGN1-201ENST00000288344 CRACR2AQ9BSW2 395 aa9.68□□□□□ -0.86
HMGN1-201ENST00000288344 NMUR1Q9HB89 426 aa9.68□□□□□ -0.86
HMGN1-201ENST00000288344 PRM3Q9NNZ6 103 aa9.68□□□□□ -0.86
HMGN1-201ENST00000288344 CYLDQ9NQC7 956 aa9.68□□□□□ -0.86
HMGN1-201ENST00000288344 HPS4Q9NQG7 708 aa9.68□□□□□ -0.86
HMGN1-201ENST00000288344 KRT82Q9NSB4 513 aa9.68□□□□□ -0.86
HMGN1-201ENST00000288344 LIMA1Q9UHB6 759 aaKnown RBP9.68□□□□□ -0.86
HMGN1-201ENST00000288344 RAPGEFL1Q9UHV5 662 aa9.68□□□□□ -0.86
HMGN1-201ENST00000288344 MAGED2Q9UNF1 606 aaPredicted RBP9.68□□□□□ -0.86
HMGN1-201ENST00000288344 MTF2Q9Y483 593 aaPredicted RBP9.68□□□□□ -0.86
HMGN1-201ENST00000288344 HELZP42694 1942 aaKnown RBP9.67□□□□□ -0.86
HMGN1-201ENST00000288344 TICRRQ7Z2Z1 1910 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 MYOFQ9NZM1 2061 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 KCNJ18B7U540 433 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 GOLGA6L22H0YM25 854 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 COCHO43405 550 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 FAM200BP0CF97 657 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 HDCP19113 662 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 EEF1GP26641 437 aaKnown RBP9.67□□□□□ -0.86
HMGN1-201ENST00000288344 ADORA2BP29275 332 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 GDI1P31150 447 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 GPD2P43304 727 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 PRKCQQ04759 706 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 TYRO3Q06418 890 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 PDE4CQ08493 712 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 USP4Q13107 963 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 GRM2Q14416 872 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 KCNJ12Q14500 433 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 KRT31Q15323 416 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 ARHGAP15Q53QZ3 475 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 BRICD5Q6PL45 260 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 CCDC186Q7Z3E2 898 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 DHX40Q8IX18 779 aaKnown RBP9.67□□□□□ -0.86
HMGN1-201ENST00000288344 ADGRG2Q8IZP9 1017 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 SIX5Q8N196 739 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 CCDC150Q8NCX0 1101 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 BPIFB1Q8TDL5 484 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 KCTD13Q8WZ19 329 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 MRPS31Q92665 395 aaKnown RBP9.67□□□□□ -0.86
HMGN1-201ENST00000288344 WBP2Q969T9 261 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 THAP11Q96EK4 314 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 BPIFA3Q9BQP9 254 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 OSBPL6Q9BZF3 934 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 UBE2TQ9NPD8 197 aaPredicted RBP9.67□□□□□ -0.86
HMGN1-201ENST00000288344 ACP6Q9NPH0 428 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 ANO10Q9NW15 660 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 EHD2Q9NZN4 543 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 TRPM5Q9NZQ8 1165 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 APEX2Q9UBZ4 518 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 DACH1Q9UI36 760 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 TSPAN16Q9UKR8 245 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.67□□□□□ -0.86
HMGN1-201ENST00000288344 SIK3Q9Y2K2 1263 aa9.67□□□□□ -0.86
HMGN1-201ENST00000288344 FOXN3O00409 490 aaPredicted RBP9.66□□□□□ -0.86
HMGN1-201ENST00000288344 XPO1O14980 1071 aaKnown RBP9.66□□□□□ -0.86
HMGN1-201ENST00000288344 PLA2G4AP47712 749 aa9.66□□□□□ -0.86
HMGN1-201ENST00000288344 PFKPQ01813 784 aa9.66□□□□□ -0.86
HMGN1-201ENST00000288344 TNK2Q07912 1038 aa9.66□□□□□ -0.86
HMGN1-201ENST00000288344 CETN1Q12798 172 aa9.66□□□□□ -0.86
HMGN1-201ENST00000288344 TCF15Q12870 199 aa9.66□□□□□ -0.86
HMGN1-201ENST00000288344 MLF2Q15773 248 aaPredicted RBP9.66□□□□□ -0.86
HMGN1-201ENST00000288344 MEA1Q16626 185 aa9.66□□□□□ -0.86
HMGN1-201ENST00000288344 EXOC3L4Q17RC7 722 aa9.66□□□□□ -0.86
HMGN1-201ENST00000288344 HSP90AA4PQ58FG1 418 aa9.66□□□□□ -0.86
HMGN1-201ENST00000288344 KLHDC7AQ5VTJ3 777 aa9.66□□□□□ -0.86
HMGN1-201ENST00000288344 PMF1Q6P1K2 205 aa9.66□□□□□ -0.86
HMGN1-201ENST00000288344 KLHDC10Q6PID8 442 aa9.66□□□□□ -0.86
HMGN1-201ENST00000288344 TXNDC11Q6PKC3 985 aa9.66□□□□□ -0.86
HMGN1-201ENST00000288344 TMEM270Q6UE05 265 aa9.66□□□□□ -0.86
HMGN1-201ENST00000288344 GBP6Q6ZN66 633 aa9.66□□□□□ -0.86
HMGN1-201ENST00000288344 ENOSF1Q7L5Y1 443 aa9.66□□□□□ -0.86
HMGN1-201ENST00000288344 FAM71AQ8IYT1 594 aa9.66□□□□□ -0.86
HMGN1-201ENST00000288344 MAML2Q8IZL2 1156 aaPredicted RBP9.66□□□□□ -0.86
HMGN1-201ENST00000288344 PPM1KQ8N3J5 372 aa9.66□□□□□ -0.86
HMGN1-201ENST00000288344 ZNF606Q8WXB4 792 aa9.66□□□□□ -0.86
HMGN1-201ENST00000288344 IRF7Q92985 503 aa9.66□□□□□ -0.86
HMGN1-201ENST00000288344 P2RY11Q96G91 374 aa9.66□□□□□ -0.86
HMGN1-201ENST00000288344 ZFYVE19Q96K21 471 aa9.66□□□□□ -0.86
HMGN1-201ENST00000288344 KLF16Q9BXK1 252 aaPredicted RBP9.66□□□□□ -0.86
HMGN1-201ENST00000288344 KCNH6Q9H252 994 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms