RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 SEMA4DQ92854 862 aa16.16■□□□□ 0.18
PDE6D-201ENST00000287600 ACDQ96AP0 544 aa16.16■□□□□ 0.18
PDE6D-201ENST00000287600 LOXL4Q96JB6 756 aa16.16■□□□□ 0.18
PDE6D-201ENST00000287600 MED15Q96RN5 788 aa16.16■□□□□ 0.18
PDE6D-201ENST00000287600 DPEP3Q9H4B8 488 aa16.16■□□□□ 0.18
PDE6D-201ENST00000287600 APOBEC3GQ9HC16 384 aaKnown RBP16.16■□□□□ 0.18
PDE6D-201ENST00000287600 POLR3BQ9NW08 1133 aaPredicted RBP16.16■□□□□ 0.18
PDE6D-201ENST00000287600 NFATC1O95644 943 aa16.15■□□□□ 0.18
PDE6D-201ENST00000287600 HDCP19113 662 aa16.15■□□□□ 0.18
PDE6D-201ENST00000287600 BDNFP23560 247 aa16.15■□□□□ 0.18
PDE6D-201ENST00000287600 NR1H3Q13133 447 aa16.15■□□□□ 0.18
PDE6D-201ENST00000287600 EML3Q32P44 896 aa16.15■□□□□ 0.18
PDE6D-201ENST00000287600 MDH1BQ5I0G3 518 aa16.15■□□□□ 0.18
PDE6D-201ENST00000287600 PCED1BQ96HM7 432 aa16.15■□□□□ 0.18
PDE6D-201ENST00000287600 NIF3L1Q9GZT8 377 aa16.15■□□□□ 0.18
PDE6D-201ENST00000287600 GCNT4Q9P109 453 aa16.15■□□□□ 0.18
PDE6D-201ENST00000287600 ARHGAP26Q9UNA1 814 aa16.15■□□□□ 0.18
PDE6D-201ENST00000287600 SPTBN2O15020 2390 aa16.14■□□□□ 0.17
PDE6D-201ENST00000287600 TRIM66O15016 1216 aa16.14■□□□□ 0.17
PDE6D-201ENST00000287600 NDST1P52848 882 aa16.14■□□□□ 0.17
PDE6D-201ENST00000287600 DMC1Q14565 340 aa16.14■□□□□ 0.17
PDE6D-201ENST00000287600 DENND5BQ6ZUT9 1274 aa16.14■□□□□ 0.17
PDE6D-201ENST00000287600 SYT13Q7L8C5 426 aa16.14■□□□□ 0.17
PDE6D-201ENST00000287600 CREBRFQ8IUR6 639 aa16.14■□□□□ 0.17
PDE6D-201ENST00000287600 B3GALNT2Q8NCR0 500 aa16.14■□□□□ 0.17
PDE6D-201ENST00000287600 DDX1Q92499 740 aaKnown RBP16.14■□□□□ 0.17
PDE6D-201ENST00000287600 TNIP3Q96KP6 325 aa16.14■□□□□ 0.17
PDE6D-201ENST00000287600 SPATA17Q96L03 361 aa16.14■□□□□ 0.17
PDE6D-201ENST00000287600 EHD2Q9NZN4 543 aa16.14■□□□□ 0.17
PDE6D-201ENST00000287600 TRPM5Q9NZQ8 1165 aa16.14■□□□□ 0.17
PDE6D-201ENST00000287600 DACH1Q9UI36 760 aa16.14■□□□□ 0.17
PDE6D-201ENST00000287600 COQ4Q9Y3A0 265 aa16.14■□□□□ 0.17
PDE6D-201ENST00000287600 APBB3O95704 486 aa16.13■□□□□ 0.17
PDE6D-201ENST00000287600 ZNF806P0C7X5 589 aa16.13■□□□□ 0.17
PDE6D-201ENST00000287600 TCF3P15923 654 aa16.13■□□□□ 0.17
PDE6D-201ENST00000287600 CD58P19256 250 aa16.13■□□□□ 0.17
PDE6D-201ENST00000287600 MPLP40238 635 aa16.13■□□□□ 0.17
PDE6D-201ENST00000287600 FMO5P49326 533 aa16.13■□□□□ 0.17
PDE6D-201ENST00000287600 USP46P62068 366 aa16.13■□□□□ 0.17
PDE6D-201ENST00000287600 ORC1Q13415 861 aa16.13■□□□□ 0.17
PDE6D-201ENST00000287600 PDAP1Q13442 181 aaKnown RBP16.13■□□□□ 0.17
PDE6D-201ENST00000287600 ELF2Q15723 593 aa16.13■□□□□ 0.17
PDE6D-201ENST00000287600 TPD52L1Q16890 204 aaPredicted RBP16.13■□□□□ 0.17
PDE6D-201ENST00000287600 ACOT1Q86TX2 421 aa16.13■□□□□ 0.17
PDE6D-201ENST00000287600 UNC93AQ86WB7 457 aa16.13■□□□□ 0.17
PDE6D-201ENST00000287600 TRIM59Q8IWR1 403 aa16.13■□□□□ 0.17
PDE6D-201ENST00000287600 EZH1Q92800 747 aaPredicted RBP16.13■□□□□ 0.17
PDE6D-201ENST00000287600 CEP295NLQ96MC4 621 aa16.13■□□□□ 0.17
PDE6D-201ENST00000287600 SMOC1Q9H4F8 434 aa16.13■□□□□ 0.17
PDE6D-201ENST00000287600 CYP3A43Q9HB55 503 aa16.13■□□□□ 0.17
PDE6D-201ENST00000287600 HMGXB4Q9UGU5 601 aa16.13■□□□□ 0.17
PDE6D-201ENST00000287600 PCDHGA5Q9Y5G8 931 aa16.13■□□□□ 0.17
PDE6D-201ENST00000287600 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.13■□□□□ 0.17
PDE6D-201ENST00000287600 F8VP50 259 aa16.12■□□□□ 0.17
PDE6D-201ENST00000287600 LEFTY2O00292 366 aa16.12■□□□□ 0.17
PDE6D-201ENST00000287600 ABL1P00519 1130 aa16.12■□□□□ 0.17
PDE6D-201ENST00000287600 C7P10643 843 aa16.12■□□□□ 0.17
PDE6D-201ENST00000287600 PFKLP17858 780 aa16.12■□□□□ 0.17
PDE6D-201ENST00000287600 ERCC5P28715 1186 aaPredicted RBP16.12■□□□□ 0.17
PDE6D-201ENST00000287600 DGKEP52429 567 aa16.12■□□□□ 0.17
PDE6D-201ENST00000287600 LIMK1P53667 647 aa16.12■□□□□ 0.17
PDE6D-201ENST00000287600 SEC13P55735 322 aa16.12■□□□□ 0.17
PDE6D-201ENST00000287600 MARSP56192 900 aaKnown RBP16.12■□□□□ 0.17
PDE6D-201ENST00000287600 IFRD2Q12894 506 aaPredicted RBP16.12■□□□□ 0.17
PDE6D-201ENST00000287600 LRMPQ12912 555 aa16.12■□□□□ 0.17
PDE6D-201ENST00000287600 PLK5Q496M5 336 aa16.12■□□□□ 0.17
PDE6D-201ENST00000287600 RBM43Q6ZSC3 357 aaKnown RBP16.12■□□□□ 0.17
PDE6D-201ENST00000287600 TSTD1Q8NFU3 115 aa16.12■□□□□ 0.17
PDE6D-201ENST00000287600 CCDC26Q8TAB7 109 aa16.12■□□□□ 0.17
PDE6D-201ENST00000287600 TATDN2Q93075 761 aa16.12■□□□□ 0.17
PDE6D-201ENST00000287600 ZC3H10Q96K80 434 aaKnown RBP16.12■□□□□ 0.17
PDE6D-201ENST00000287600 B3GNT5Q9BYG0 378 aa16.12■□□□□ 0.17
PDE6D-201ENST00000287600 LINC00597Q9H2U6 94 aa16.12■□□□□ 0.17
PDE6D-201ENST00000287600 CLDN5O00501 218 aa16.11■□□□□ 0.17
PDE6D-201ENST00000287600 GBP1P32455 592 aa16.11■□□□□ 0.17
PDE6D-201ENST00000287600 INCA1Q0VD86 236 aa16.11■□□□□ 0.17
PDE6D-201ENST00000287600 CETN1Q12798 172 aa16.11■□□□□ 0.17
PDE6D-201ENST00000287600 KCNH2Q12809 1159 aa16.11■□□□□ 0.17
PDE6D-201ENST00000287600 CCDC183Q5T5S1 534 aa16.11■□□□□ 0.17
PDE6D-201ENST00000287600 SASS6Q6UVJ0 657 aa16.11■□□□□ 0.17
PDE6D-201ENST00000287600 CRYBG2Q8N1P7 616 aa16.11■□□□□ 0.17
PDE6D-201ENST00000287600 FAXDC2Q96IV6 333 aa16.11■□□□□ 0.17
PDE6D-201ENST00000287600 CNOT6LQ96LI5 555 aaKnown RBP16.11■□□□□ 0.17
PDE6D-201ENST00000287600 TWNKQ96RR1 684 aa16.11■□□□□ 0.17
PDE6D-201ENST00000287600 MED10Q9BTT4 135 aa16.11■□□□□ 0.17
PDE6D-201ENST00000287600 TTLL2Q9BWV7 592 aa16.11■□□□□ 0.17
PDE6D-201ENST00000287600 NT5C1AQ9BXI3 368 aa16.11■□□□□ 0.17
PDE6D-201ENST00000287600 ZNF518BQ9C0D4 1074 aa16.11■□□□□ 0.17
PDE6D-201ENST00000287600 ELOVL4Q9GZR5 314 aa16.11■□□□□ 0.17
PDE6D-201ENST00000287600 DUSP15Q9H1R2 295 aaPredicted RBP16.11■□□□□ 0.17
PDE6D-201ENST00000287600 VPS45Q9NRW7 570 aa16.11■□□□□ 0.17
PDE6D-201ENST00000287600 RXFP3Q9NSD7 469 aa16.11■□□□□ 0.17
PDE6D-201ENST00000287600 SMPD4Q9NXE4 827 aa16.11■□□□□ 0.17
PDE6D-201ENST00000287600 CPQQ9Y646 472 aa16.11■□□□□ 0.17
PDE6D-201ENST00000287600 SDK1Q7Z5N4 2213 aa16.11■□□□□ 0.17
PDE6D-201ENST00000287600 ZNF840PA6NDX5 716 aa16.1■□□□□ 0.17
PDE6D-201ENST00000287600 RIOK3O14730 519 aaKnown RBP16.1■□□□□ 0.17
PDE6D-201ENST00000287600 DCLK1O15075 740 aa16.1■□□□□ 0.17
PDE6D-201ENST00000287600 CILPO75339 1184 aa16.1■□□□□ 0.17
PDE6D-201ENST00000287600 RHOBTB1O94844 696 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms