RNA–Protein interactions for RNA: ENST00000287538.9

ZIC3-201, Transcript of Zic family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC3, Length 3,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3-201ENST00000287538 FAM187AA6NFU0 413 aa13.43□□□□□ -0.26
ZIC3-201ENST00000287538 TRPA1O75762 1119 aa13.43□□□□□ -0.26
ZIC3-201ENST00000287538 C1orf228Q6PIY5 440 aa13.43□□□□□ -0.26
ZIC3-201ENST00000287538 ANKLE1Q8NAG6 615 aa13.43□□□□□ -0.26
ZIC3-201ENST00000287538 FAM81AQ8TBF8 368 aa13.43□□□□□ -0.26
ZIC3-201ENST00000287538 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.43□□□□□ -0.26
ZIC3-201ENST00000287538 ERP27Q96DN0 273 aa13.43□□□□□ -0.26
ZIC3-201ENST00000287538 MAK16Q9BXY0 300 aaKnown RBP13.43□□□□□ -0.26
ZIC3-201ENST00000287538 MYLK2Q9H1R3 596 aa13.43□□□□□ -0.26
ZIC3-201ENST00000287538 GPBP1L1Q9HC44 474 aaPredicted RBP13.43□□□□□ -0.26
ZIC3-201ENST00000287538 PRKAG3Q9UGI9 489 aa13.43□□□□□ -0.26
ZIC3-201ENST00000287538 SCOCQ9UIL1 159 aa13.43□□□□□ -0.26
ZIC3-201ENST00000287538 ANAPC5Q9UJX4 755 aa13.43□□□□□ -0.26
ZIC3-201ENST00000287538 CASTOR2A6NHX0 329 aa13.43□□□□□ -0.26
ZIC3-201ENST00000287538 E7ENQ6 273 aa13.43□□□□□ -0.26
ZIC3-201ENST00000287538 ZNF865P0CJ78 1059 aaPredicted RBP13.43□□□□□ -0.26
ZIC3-201ENST00000287538 DARSP14868 501 aaKnown RBP13.43□□□□□ -0.26
ZIC3-201ENST00000287538 ACADSP16219 412 aa13.43□□□□□ -0.26
ZIC3-201ENST00000287538 C1QBPQ07021 282 aaKnown RBP13.43□□□□□ -0.26
ZIC3-201ENST00000287538 MMRN1Q13201 1228 aa13.43□□□□□ -0.26
ZIC3-201ENST00000287538 ZNF449Q6P9G9 518 aa13.43□□□□□ -0.26
ZIC3-201ENST00000287538 TRIM74Q86UV6 250 aa13.43□□□□□ -0.26
ZIC3-201ENST00000287538 TRIM73Q86UV7 250 aa13.43□□□□□ -0.26
ZIC3-201ENST00000287538 PHC3Q8NDX5 983 aa13.43□□□□□ -0.26
ZIC3-201ENST00000287538 DDX27Q96GQ7 796 aaKnown RBP13.43□□□□□ -0.26
ZIC3-201ENST00000287538 CFAP57Q96MR6 1250 aa13.43□□□□□ -0.26
ZIC3-201ENST00000287538 GAD1Q99259 594 aa13.43□□□□□ -0.26
ZIC3-201ENST00000287538 ASB7Q9H672 318 aa13.43□□□□□ -0.26
ZIC3-201ENST00000287538 GRHL1Q9NZI5 618 aa13.43□□□□□ -0.26
ZIC3-201ENST00000287538 DNPEPQ9ULA0 475 aa13.43□□□□□ -0.26
ZIC3-201ENST00000287538 A6NJR5 290 aa13.42□□□□□ -0.26
ZIC3-201ENST00000287538 CLDN5O00501 218 aa13.42□□□□□ -0.26
ZIC3-201ENST00000287538 CST8O60676 142 aa13.42□□□□□ -0.26
ZIC3-201ENST00000287538 ENTPD5O75356 428 aa13.42□□□□□ -0.26
ZIC3-201ENST00000287538 PYGBP11216 843 aa13.42□□□□□ -0.26
ZIC3-201ENST00000287538 SKIV2L2P42285 1042 aaKnown RBP13.42□□□□□ -0.26
ZIC3-201ENST00000287538 SETDB1Q15047 1291 aa13.42□□□□□ -0.26
ZIC3-201ENST00000287538 KYNUQ16719 465 aa13.42□□□□□ -0.26
ZIC3-201ENST00000287538 APBB1IPQ7Z5R6 666 aaPredicted RBP13.42□□□□□ -0.26
ZIC3-201ENST00000287538 PHF13Q86YI8 300 aaPredicted RBP13.42□□□□□ -0.26
ZIC3-201ENST00000287538 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.42□□□□□ -0.26
ZIC3-201ENST00000287538 CKAP2Q8WWK9 683 aa13.42□□□□□ -0.26
ZIC3-201ENST00000287538 CD101Q93033 1021 aa13.42□□□□□ -0.26
ZIC3-201ENST00000287538 WDR90Q96KV7 1748 aa13.42□□□□□ -0.26
ZIC3-201ENST00000287538 TMEM191CA6NGB0 347 aa13.42□□□□□ -0.26
ZIC3-201ENST00000287538 POMCP01189 267 aa13.42□□□□□ -0.26
ZIC3-201ENST00000287538 CTGFP29279 349 aa13.42□□□□□ -0.26
ZIC3-201ENST00000287538 ITGA8P53708 1063 aa13.42□□□□□ -0.26
ZIC3-201ENST00000287538 PRKCZQ05513 592 aa13.42□□□□□ -0.26
ZIC3-201ENST00000287538 PLEKHA7Q6IQ23 1121 aa13.42□□□□□ -0.26
ZIC3-201ENST00000287538 CGB2Q6NT52 195 aa13.42□□□□□ -0.26
ZIC3-201ENST00000287538 VSTM1Q6UX27 236 aa13.42□□□□□ -0.26
ZIC3-201ENST00000287538 KLHL23Q8NBE8 558 aa13.42□□□□□ -0.26
ZIC3-201ENST00000287538 GLIS1Q8NBF1 620 aa13.42□□□□□ -0.26
ZIC3-201ENST00000287538 LBHD1Q9BQE6 289 aaPredicted RBP13.42□□□□□ -0.26
ZIC3-201ENST00000287538 AVENQ9NQS1 362 aaPredicted RBP13.42□□□□□ -0.26
ZIC3-201ENST00000287538 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.42□□□□□ -0.26
ZIC3-201ENST00000287538 EPHB2P29323 1055 aa13.41□□□□□ -0.26
ZIC3-201ENST00000287538 SLC1A1P43005 524 aa13.41□□□□□ -0.26
ZIC3-201ENST00000287538 NUMBP49757 651 aa13.41□□□□□ -0.26
ZIC3-201ENST00000287538 CDH6P55285 790 aa13.41□□□□□ -0.26
ZIC3-201ENST00000287538 GPS1Q13098 491 aa13.41□□□□□ -0.26
ZIC3-201ENST00000287538 DHX34Q14147 1143 aaKnown RBP13.41□□□□□ -0.26
ZIC3-201ENST00000287538 RCN2Q14257 317 aa13.41□□□□□ -0.26
ZIC3-201ENST00000287538 CCDC6Q16204 474 aa13.41□□□□□ -0.26
ZIC3-201ENST00000287538 RNF43Q68DV7 783 aa13.41□□□□□ -0.26
ZIC3-201ENST00000287538 AGGF1Q8N302 714 aaeCLIP13.41□□□□□ -0.26
ZIC3-201ENST00000287538 CLEC4CQ8WTT0 213 aa13.41□□□□□ -0.26
ZIC3-201ENST00000287538 TMEM174Q8WUU8 243 aa13.41□□□□□ -0.26
ZIC3-201ENST00000287538 RXFP2Q8WXD0 754 aa13.41□□□□□ -0.26
ZIC3-201ENST00000287538 PAIP2Q9BPZ3 127 aaKnown RBP13.41□□□□□ -0.26
ZIC3-201ENST00000287538 CTNNAL1Q9UBT7 734 aa13.41□□□□□ -0.26
ZIC3-201ENST00000287538 BARX2Q9UMQ3 279 aaPredicted RBP13.41□□□□□ -0.26
ZIC3-201ENST00000287538 SMIM28A0A1B0GU29 152 aa13.41□□□□□ -0.26
ZIC3-201ENST00000287538 YY1P25490 414 aa13.41□□□□□ -0.26
ZIC3-201ENST00000287538 GNL1P36915 607 aaPredicted RBP13.41□□□□□ -0.26
ZIC3-201ENST00000287538 MLH1P40692 756 aa13.41□□□□□ -0.26
ZIC3-201ENST00000287538 HTRA3P83110 453 aa13.41□□□□□ -0.26
ZIC3-201ENST00000287538 KRT81Q14533 505 aa13.41□□□□□ -0.26
ZIC3-201ENST00000287538 PPP2R5EQ16537 467 aa13.41□□□□□ -0.26
ZIC3-201ENST00000287538 HADHQ16836 314 aaKnown RBP13.41□□□□□ -0.26
ZIC3-201ENST00000287538 PARP6Q2NL67 630 aa13.41□□□□□ -0.26
ZIC3-201ENST00000287538 P3H1Q32P28 736 aa13.41□□□□□ -0.26
ZIC3-201ENST00000287538 TMEM109Q9BVC6 243 aa13.41□□□□□ -0.26
ZIC3-201ENST00000287538 MAGEB5Q9BZ81 275 aa13.41□□□□□ -0.26
ZIC3-201ENST00000287538 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.41□□□□□ -0.26
ZIC3-201ENST00000287538 CHCHD3Q9NX63 227 aaKnown RBP13.41□□□□□ -0.26
ZIC3-201ENST00000287538 PCDH10Q9P2E7 1040 aa13.41□□□□□ -0.26
ZIC3-201ENST00000287538 CDY2AQ9Y6F7 541 aa13.41□□□□□ -0.26
ZIC3-201ENST00000287538 NVLO15381 856 aaKnown RBP13.41□□□□□ -0.26
ZIC3-201ENST00000287538 CILPO75339 1184 aa13.41□□□□□ -0.26
ZIC3-201ENST00000287538 BRAFP15056 766 aa13.41□□□□□ -0.26
ZIC3-201ENST00000287538 ATXN1P54253 815 aaKnown RBP13.41□□□□□ -0.26
ZIC3-201ENST00000287538 OR52E8Q6IFG1 317 aa13.41□□□□□ -0.26
ZIC3-201ENST00000287538 PMF1Q6P1K2 205 aa13.41□□□□□ -0.26
ZIC3-201ENST00000287538 CTU1Q7Z7A3 348 aaKnown RBP13.41□□□□□ -0.26
ZIC3-201ENST00000287538 PITPNM3Q9BZ71 974 aa13.41□□□□□ -0.26
ZIC3-201ENST00000287538 MAF1Q9H063 256 aa13.41□□□□□ -0.26
ZIC3-201ENST00000287538 LRMDAQ9H2I8 198 aa13.41□□□□□ -0.26
ZIC3-201ENST00000287538 GNEQ9Y223 722 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms