RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 ASLP04424 464 aa16.63■□□□□ 0.25
MAP1LC3B-201ENST00000268607 CDK7P50613 346 aa16.63■□□□□ 0.25
MAP1LC3B-201ENST00000268607 CLCN3P51790 818 aa16.63■□□□□ 0.25
MAP1LC3B-201ENST00000268607 BEX3Q00994 111 aa16.63■□□□□ 0.25
MAP1LC3B-201ENST00000268607 CLEC16AQ2KHT3 1053 aa16.63■□□□□ 0.25
MAP1LC3B-201ENST00000268607 OLFML2BQ68BL8 750 aa16.63■□□□□ 0.25
MAP1LC3B-201ENST00000268607 GLIS1Q8NBF1 620 aa16.63■□□□□ 0.25
MAP1LC3B-201ENST00000268607 MPHOSPH6Q99547 160 aaKnown RBP16.63■□□□□ 0.25
MAP1LC3B-201ENST00000268607 NIFKQ9BYG3 293 aaKnown RBP16.63■□□□□ 0.25
MAP1LC3B-201ENST00000268607 NUB1Q9Y5A7 615 aa16.63■□□□□ 0.25
MAP1LC3B-201ENST00000268607 PCDHB4Q9Y5E5 795 aa16.63■□□□□ 0.25
MAP1LC3B-201ENST00000268607 GMEB1Q9Y692 573 aa16.63■□□□□ 0.25
MAP1LC3B-201ENST00000268607 H0YCG3 227 aa16.62■□□□□ 0.25
MAP1LC3B-201ENST00000268607 TRPA1O75762 1119 aa16.62■□□□□ 0.25
MAP1LC3B-201ENST00000268607 TMCC1O94876 653 aa16.62■□□□□ 0.25
MAP1LC3B-201ENST00000268607 CST3P01034 146 aaPredicted RBP16.62■□□□□ 0.25
MAP1LC3B-201ENST00000268607 CPA2P48052 419 aa16.62■□□□□ 0.25
MAP1LC3B-201ENST00000268607 ZBTB16Q05516 673 aa16.62■□□□□ 0.25
MAP1LC3B-201ENST00000268607 TARBP2Q15633 366 aaKnown RBP16.62■□□□□ 0.25
MAP1LC3B-201ENST00000268607 SPATA24Q86W54 205 aa16.62■□□□□ 0.25
MAP1LC3B-201ENST00000268607 TMEM130Q8N3G9 435 aa16.62■□□□□ 0.25
MAP1LC3B-201ENST00000268607 RNF149Q8NC42 400 aa16.62■□□□□ 0.25
MAP1LC3B-201ENST00000268607 A0A0B4J269 797 aa16.62■□□□□ 0.25
MAP1LC3B-201ENST00000268607 ZBTB42B2RXF5 422 aa16.62■□□□□ 0.25
MAP1LC3B-201ENST00000268607 ITGA2BP08514 1039 aa16.62■□□□□ 0.25
MAP1LC3B-201ENST00000268607 ZSCAN5DPP0CG00 497 aa16.62■□□□□ 0.25
MAP1LC3B-201ENST00000268607 MCCD1P59942 119 aaPredicted RBP16.62■□□□□ 0.25
MAP1LC3B-201ENST00000268607 ZNF394Q53GI3 561 aa16.62■□□□□ 0.25
MAP1LC3B-201ENST00000268607 IZUMO2Q6UXV1 221 aa16.62■□□□□ 0.25
MAP1LC3B-201ENST00000268607 TTC7BQ86TV6 843 aa16.62■□□□□ 0.25
MAP1LC3B-201ENST00000268607 LRRC6Q86X45 466 aa16.62■□□□□ 0.25
MAP1LC3B-201ENST00000268607 TDRPQ86YL5 185 aa16.62■□□□□ 0.25
MAP1LC3B-201ENST00000268607 NMD3Q96D46 503 aaKnown RBP16.62■□□□□ 0.25
MAP1LC3B-201ENST00000268607 DDX27Q96GQ7 796 aaKnown RBP16.62■□□□□ 0.25
MAP1LC3B-201ENST00000268607 GINS2Q9Y248 185 aa16.62■□□□□ 0.25
MAP1LC3B-201ENST00000268607 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.62■□□□□ 0.25
MAP1LC3B-201ENST00000268607 ESRRAP11474 423 aaPredicted RBP16.61■□□□□ 0.25
MAP1LC3B-201ENST00000268607 MPP3Q13368 585 aa16.61■□□□□ 0.25
MAP1LC3B-201ENST00000268607 SEPT7Q16181 437 aaKnown RBP16.61■□□□□ 0.25
MAP1LC3B-201ENST00000268607 MARK2Q7KZI7 788 aaKnown RBP16.61■□□□□ 0.25
MAP1LC3B-201ENST00000268607 STKLD1Q8NE28 680 aa16.61■□□□□ 0.25
MAP1LC3B-201ENST00000268607 ZNF398Q8TD17 642 aa16.61■□□□□ 0.25
MAP1LC3B-201ENST00000268607 NAT14Q8WUY8 206 aa16.61■□□□□ 0.25
MAP1LC3B-201ENST00000268607 DNAJC1Q96KC8 554 aaKnown RBP16.61■□□□□ 0.25
MAP1LC3B-201ENST00000268607 C11orf70Q9BRQ4 267 aa16.61■□□□□ 0.25
MAP1LC3B-201ENST00000268607 ZFYVE28Q9HCC9 887 aa16.61■□□□□ 0.25
MAP1LC3B-201ENST00000268607 DDX43Q9NXZ2 648 aaKnown RBP16.61■□□□□ 0.25
MAP1LC3B-201ENST00000268607 SENP1Q9P0U3 644 aa16.61■□□□□ 0.25
MAP1LC3B-201ENST00000268607 STYXL1Q9Y6J8 313 aa16.61■□□□□ 0.25
MAP1LC3B-201ENST00000268607 ADGRA2Q96PE1 1338 aa16.61■□□□□ 0.25
MAP1LC3B-201ENST00000268607 GOLGA8RI6L899 631 aa16.61■□□□□ 0.25
MAP1LC3B-201ENST00000268607 ADCY3O60266 1144 aa16.61■□□□□ 0.25
MAP1LC3B-201ENST00000268607 TOMM70O94826 608 aa16.61■□□□□ 0.25
MAP1LC3B-201ENST00000268607 UNGP13051 313 aaPredicted RBP16.61■□□□□ 0.25
MAP1LC3B-201ENST00000268607 KLRC2P26717 231 aa16.61■□□□□ 0.25
MAP1LC3B-201ENST00000268607 GJC1P36383 396 aa16.61■□□□□ 0.25
MAP1LC3B-201ENST00000268607 ARFIP2P53365 341 aa16.61■□□□□ 0.25
MAP1LC3B-201ENST00000268607 CENPCQ03188 943 aa16.61■□□□□ 0.25
MAP1LC3B-201ENST00000268607 CFAP157Q5JU67 520 aa16.61■□□□□ 0.25
MAP1LC3B-201ENST00000268607 ZBED8Q8IZ13 594 aa16.61■□□□□ 0.25
MAP1LC3B-201ENST00000268607 MCOLN2Q8IZK6 566 aa16.61■□□□□ 0.25
MAP1LC3B-201ENST00000268607 TTC25Q96NG3 672 aa16.61■□□□□ 0.25
MAP1LC3B-201ENST00000268607 KLF6Q99612 283 aaPredicted RBP16.61■□□□□ 0.25
MAP1LC3B-201ENST00000268607 PCDHB2Q9Y5E7 798 aa16.61■□□□□ 0.25
MAP1LC3B-201ENST00000268607 MYCP01106 439 aaPredicted RBP16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 CD58P19256 250 aa16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 PGM1P36871 562 aa16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 MAP2K5Q13163 448 aa16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 KLF1Q13351 362 aaPredicted RBP16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 CUL2Q13617 745 aa16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 CCNG2Q16589 344 aa16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 FAM160B1Q5W0V3 765 aa16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 ANKS1BQ7Z6G8 1248 aa16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 RHPN2Q8IUC4 686 aa16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 MPP4Q96JB8 637 aa16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 FAM161BQ96MY7 647 aa16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 TRIM55Q9BYV6 548 aa16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 ARMCX1Q9P291 453 aa16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 CNTNAP2Q9UHC6 1331 aa16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 LRRC37A2A6NM11 1700 aa16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 RNASEH1O60930 286 aaKnown RBP16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 MAFO75444 373 aaPredicted RBP16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 BANF1O75531 89 aa16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 LGALS2P05162 132 aa16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 ETS1P14921 441 aa16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 VAV1P15498 845 aa16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 NOP14P78316 857 aaKnown RBP16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 CLDN10P78369 228 aa16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 NCOA4Q13772 614 aa16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 EFTUD2Q15029 972 aaKnown RBP eCLIP16.6■□□□□ 0.253e-7■■■■□ 21.2
MAP1LC3B-201ENST00000268607 MORN1Q5T089 497 aa16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 SLFN12LQ6IEE8 588 aa16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 ZNF276Q8N554 614 aa16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 TCP10LQ8TDR4 215 aa16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 GTF3C2Q8WUA4 911 aaPredicted RBP16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 ABTB1Q969K4 478 aaPredicted RBP16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 CAPNS2Q96L46 248 aa16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 NLRP4Q96MN2 994 aa16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 TUBB6Q9BUF5 446 aa16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 TMEM120AQ9BXJ8 343 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms