RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 BYSLQ13895 437 aaKnown RBP12.08□□□□□ -0.48
SCAF11-201ENST00000266589 KRT81Q14533 505 aa12.08□□□□□ -0.48
SCAF11-201ENST00000266589 MAPRE1Q15691 268 aaKnown RBP12.08□□□□□ -0.48
SCAF11-201ENST00000266589 BOLA3Q53S33 107 aa12.08□□□□□ -0.48
SCAF11-201ENST00000266589 RAB41Q5JT25 222 aa12.08□□□□□ -0.48
SCAF11-201ENST00000266589 FAM43BQ6ZT52 329 aaPredicted RBP12.08□□□□□ -0.48
SCAF11-201ENST00000266589 BBS12Q6ZW61 710 aa12.08□□□□□ -0.48
SCAF11-201ENST00000266589 DEFB128Q7Z7B8 93 aa12.08□□□□□ -0.48
SCAF11-201ENST00000266589 RFX6Q8HWS3 928 aa12.08□□□□□ -0.48
SCAF11-201ENST00000266589 TEKT4Q8WW24 435 aa12.08□□□□□ -0.48
SCAF11-201ENST00000266589 TOX2Q96NM4 488 aa12.08□□□□□ -0.48
SCAF11-201ENST00000266589 TBCBQ99426 244 aa12.08□□□□□ -0.48
SCAF11-201ENST00000266589 FMO2Q99518 471 aa12.08□□□□□ -0.48
SCAF11-201ENST00000266589 SNRNP25Q9BV90 132 aaKnown RBP12.08□□□□□ -0.48
SCAF11-201ENST00000266589 UBXN6Q9BZV1 441 aa12.08□□□□□ -0.48
SCAF11-201ENST00000266589 NRDE2Q9H7Z3 1164 aa12.08□□□□□ -0.48
SCAF11-201ENST00000266589 CSNK1G1Q9HCP0 422 aa12.08□□□□□ -0.48
SCAF11-201ENST00000266589 ZDHHC18Q9NUE0 388 aa12.08□□□□□ -0.48
SCAF11-201ENST00000266589 GPATCH2LQ9NWQ4 482 aa12.08□□□□□ -0.48
SCAF11-201ENST00000266589 ASIC3Q9UHC3 531 aa12.08□□□□□ -0.48
SCAF11-201ENST00000266589 DNPEPQ9ULA0 475 aa12.08□□□□□ -0.48
SCAF11-201ENST00000266589 PATJQ8NI35 1801 aa12.08□□□□□ -0.48
SCAF11-201ENST00000266589 FNDC1Q4ZHG4 1894 aaPredicted RBP12.08□□□□□ -0.48
SCAF11-201ENST00000266589 MICAL3Q7RTP6 2002 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 GOLGA6BA6NDN3 693 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 HHLA1C9JL84 531 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 H3BQF6 201 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 NRP1O14786 923 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 TRAPPC3O43617 180 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 TADA2AO75478 443 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 ENDOD1O94919 500 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 PARNO95453 639 aaKnown RBP12.07□□□□□ -0.48
SCAF11-201ENST00000266589 HSPA9P38646 679 aaKnown RBP12.07□□□□□ -0.48
SCAF11-201ENST00000266589 SULT1E1P49888 294 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 PLTPP55058 493 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 MMRN1Q13201 1228 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 DPYSL3Q14195 570 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 TRIP13Q15645 432 aaPredicted RBP12.07□□□□□ -0.48
SCAF11-201ENST00000266589 DCAF6Q58WW2 860 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 ZC3H12AQ5D1E8 599 aaKnown RBP12.07□□□□□ -0.48
SCAF11-201ENST00000266589 DRICH1Q6PGQ1 229 aaPredicted RBP12.07□□□□□ -0.48
SCAF11-201ENST00000266589 ZDHHC24Q6UX98 284 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 HFE2Q6ZVN8 426 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 NPAS4Q8IUM7 802 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 FBXO25Q8TCJ0 367 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 POPDC2Q9HBU9 364 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 CNGB3Q9NQW8 809 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 VWA8A3KMH1 1905 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 MDM4O15151 490 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 HOXA2O43364 376 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 USP17L7P0C7H9 530 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 OAS2P29728 719 aaKnown RBP12.07□□□□□ -0.48
SCAF11-201ENST00000266589 DAOAP59103 153 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 FAM193AP78312 1265 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 OTUD4Q01804 1114 aaKnown RBP12.07□□□□□ -0.48
SCAF11-201ENST00000266589 LMNB2Q03252 620 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 PDK2Q15119 407 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 SLC25A52Q3SY17 297 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 C1orf53Q5VUE5 145 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 ZNF365Q70YC5 407 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 STRADAQ7RTN6 431 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 GSTA5Q7RTV2 222 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 CTU1Q7Z7A3 348 aaKnown RBP12.07□□□□□ -0.48
SCAF11-201ENST00000266589 MAP7D3Q8IWC1 876 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 CRIPAKQ8N1N5 446 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 LRRC45Q96CN5 670 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 SLC2A13Q96QE2 648 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 MAK16Q9BXY0 300 aaKnown RBP12.07□□□□□ -0.48
SCAF11-201ENST00000266589 DMAP1Q9NPF5 467 aaPredicted RBP12.07□□□□□ -0.48
SCAF11-201ENST00000266589 CALCOCO1Q9P1Z2 691 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 HCSTQ9UBK5 93 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 ADAM28Q9UKQ2 775 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 ZNF148Q9UQR1 794 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 ATP11BQ9Y2G3 1177 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 NEU2Q9Y3R4 380 aa12.07□□□□□ -0.48
SCAF11-201ENST00000266589 YJEFN3A6XGL0 299 aa12.06□□□□□ -0.48
SCAF11-201ENST00000266589 TBKBP1A7MCY6 615 aa12.06□□□□□ -0.48
SCAF11-201ENST00000266589 E7ENQ6 273 aa12.06□□□□□ -0.48
SCAF11-201ENST00000266589 OR4Q2P0C623 313 aa12.06□□□□□ -0.48
SCAF11-201ENST00000266589 NOS2P35228 1153 aa12.06□□□□□ -0.48
SCAF11-201ENST00000266589 VPS41P49754 854 aa12.06□□□□□ -0.48
SCAF11-201ENST00000266589 VCPP55072 806 aaKnown RBP12.06□□□□□ -0.48
SCAF11-201ENST00000266589 CALCOCO2Q13137 446 aa12.06□□□□□ -0.48
SCAF11-201ENST00000266589 CA9Q16790 459 aa12.06□□□□□ -0.48
SCAF11-201ENST00000266589 ERMARDQ5T6L9 678 aa12.06□□□□□ -0.48
SCAF11-201ENST00000266589 FBXO46Q6PJ61 603 aaPredicted RBP12.06□□□□□ -0.48
SCAF11-201ENST00000266589 C4orf50Q6ZRC1 276 aa12.06□□□□□ -0.48
SCAF11-201ENST00000266589 TMC3Q7Z5M5 1100 aa12.06□□□□□ -0.48
SCAF11-201ENST00000266589 SPATA2LQ8IUW3 424 aaPredicted RBP12.06□□□□□ -0.48
SCAF11-201ENST00000266589 TTC13Q8NBP0 860 aa12.06□□□□□ -0.48
SCAF11-201ENST00000266589 ACTL9Q8TC94 416 aa12.06□□□□□ -0.48
SCAF11-201ENST00000266589 MRPL9Q9BYD2 267 aaKnown RBP12.06□□□□□ -0.48
SCAF11-201ENST00000266589 PCDH18Q9HCL0 1135 aa12.06□□□□□ -0.48
SCAF11-201ENST00000266589 SAE1Q9UBE0 346 aaPredicted RBP12.06□□□□□ -0.48
SCAF11-201ENST00000266589 TBX21Q9UL17 535 aa12.06□□□□□ -0.48
SCAF11-201ENST00000266589 STAP1Q9ULZ2 295 aa12.06□□□□□ -0.48
SCAF11-201ENST00000266589 SYNJ2BP-COX16A0A087WUM0 186 aa12.06□□□□□ -0.48
SCAF11-201ENST00000266589 APOC4-APOC2K7ER74 178 aa12.06□□□□□ -0.48
SCAF11-201ENST00000266589 CAPN9O14815 690 aa12.06□□□□□ -0.48
SCAF11-201ENST00000266589 SYN3O14994 580 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms