RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 FAM136AQ96C01 138 aa13.21□□□□□ -0.29
PRPF6-201ENST00000266079 ARHGEF26Q96DR7 871 aa13.21□□□□□ -0.29
PRPF6-201ENST00000266079 GORASP1Q9BQQ3 440 aa13.21□□□□□ -0.29
PRPF6-201ENST00000266079 CHST12Q9NRB3 414 aa13.21□□□□□ -0.29
PRPF6-201ENST00000266079 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.21□□□□□ -0.294e-6■□□□□ 8.2
PRPF6-201ENST00000266079 HCSTQ9UBK5 93 aa13.21□□□□□ -0.29
PRPF6-201ENST00000266079 TBX21Q9UL17 535 aa13.21□□□□□ -0.29
PRPF6-201ENST00000266079 COQ4Q9Y3A0 265 aa13.21□□□□□ -0.29
PRPF6-201ENST00000266079 PITPNM1O00562 1244 aa13.21□□□□□ -0.3
PRPF6-201ENST00000266079 TAC1P20366 129 aa13.21□□□□□ -0.3
PRPF6-201ENST00000266079 DSC3Q14574 896 aa13.21□□□□□ -0.3
PRPF6-201ENST00000266079 COL13A1Q5TAT6 717 aaPredicted RBP13.21□□□□□ -0.3
PRPF6-201ENST00000266079 RNF220Q5VTB9 566 aa13.21□□□□□ -0.3
PRPF6-201ENST00000266079 OR52E8Q6IFG1 317 aa13.21□□□□□ -0.3
PRPF6-201ENST00000266079 ARHGEF18Q6ZSZ5 1173 aa13.21□□□□□ -0.3
PRPF6-201ENST00000266079 LONP2Q86WA8 852 aa13.21□□□□□ -0.3
PRPF6-201ENST00000266079 ERP27Q96DN0 273 aa13.21□□□□□ -0.3
PRPF6-201ENST00000266079 IFT43Q96FT9 208 aa13.21□□□□□ -0.3
PRPF6-201ENST00000266079 EPAS1Q99814 870 aa13.21□□□□□ -0.3
PRPF6-201ENST00000266079 PITPNM3Q9BZ71 974 aa13.21□□□□□ -0.3
PRPF6-201ENST00000266079 RSAD1Q9HA92 442 aa13.21□□□□□ -0.3
PRPF6-201ENST00000266079 HAO1Q9UJM8 370 aa13.21□□□□□ -0.3
PRPF6-201ENST00000266079 F8W810 466 aa13.2□□□□□ -0.3
PRPF6-201ENST00000266079 H0Y3Z8 333 aa13.2□□□□□ -0.3
PRPF6-201ENST00000266079 P4HA2O15460 535 aa13.2□□□□□ -0.3
PRPF6-201ENST00000266079 CYP26A1O43174 497 aa13.2□□□□□ -0.3
PRPF6-201ENST00000266079 ACSL3O95573 720 aa13.2□□□□□ -0.3
PRPF6-201ENST00000266079 TARSP26639 723 aaKnown RBP13.2□□□□□ -0.3
PRPF6-201ENST00000266079 CUL3Q13618 768 aa13.2□□□□□ -0.3
PRPF6-201ENST00000266079 DPH6Q7L8W6 267 aa13.2□□□□□ -0.3
PRPF6-201ENST00000266079 RPUSD2Q8IZ73 545 aaKnown RBP13.2□□□□□ -0.3
PRPF6-201ENST00000266079 GSTCDQ8NEC7 633 aa13.2□□□□□ -0.3
PRPF6-201ENST00000266079 TBC1D10AQ9BXI6 508 aa13.2□□□□□ -0.3
PRPF6-201ENST00000266079 FOXO6A8MYZ6 492 aa13.2□□□□□ -0.3
PRPF6-201ENST00000266079 MIF4GDA9UHW6 222 aaKnown RBP13.2□□□□□ -0.3
PRPF6-201ENST00000266079 MUM1Q2TAK8 710 aa13.2□□□□□ -0.3
PRPF6-201ENST00000266079 ZC3H12AQ5D1E8 599 aaKnown RBP13.2□□□□□ -0.3
PRPF6-201ENST00000266079 B4GALNT2Q8NHY0 566 aa13.2□□□□□ -0.3
PRPF6-201ENST00000266079 SEPT8Q92599 483 aa13.2□□□□□ -0.3
PRPF6-201ENST00000266079 HPDLQ96IR7 371 aa13.2□□□□□ -0.3
PRPF6-201ENST00000266079 TOX2Q96NM4 488 aa13.2□□□□□ -0.3
PRPF6-201ENST00000266079 TRAPPC9Q96Q05 1148 aa13.2□□□□□ -0.3
PRPF6-201ENST00000266079 GPR88Q9GZN0 384 aa13.2□□□□□ -0.3
PRPF6-201ENST00000266079 NKIRAS1Q9NYS0 192 aa13.2□□□□□ -0.3
PRPF6-201ENST00000266079 CTTNBP2NLQ9P2B4 639 aa13.2□□□□□ -0.3
PRPF6-201ENST00000266079 RPL26L1Q9UNX3 145 aaKnown RBP13.2□□□□□ -0.3
PRPF6-201ENST00000266079 CHKBQ9Y259 395 aa13.2□□□□□ -0.3
PRPF6-201ENST00000266079 ALG6Q9Y672 507 aa13.2□□□□□ -0.3
PRPF6-201ENST00000266079 USH1CQ9Y6N9 552 aa13.2□□□□□ -0.3
PRPF6-201ENST00000266079 CHD7Q9P2D1 2997 aa13.2□□□□□ -0.3
PRPF6-201ENST00000266079 FOXN2P32314 431 aa13.19□□□□□ -0.3
PRPF6-201ENST00000266079 COILP38432 576 aaPredicted RBP13.19□□□□□ -0.3
PRPF6-201ENST00000266079 KYAT1Q16773 422 aa13.19□□□□□ -0.3
PRPF6-201ENST00000266079 PLEKHG4Q58EX7 1191 aa13.19□□□□□ -0.3
PRPF6-201ENST00000266079 TMEM270Q6UE05 265 aa13.19□□□□□ -0.3
PRPF6-201ENST00000266079 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.19□□□□□ -0.32e-10■■■■■ 67.7
PRPF6-201ENST00000266079 SLC24A5Q71RS6 500 aa13.19□□□□□ -0.3
PRPF6-201ENST00000266079 ARHGAP22Q7Z5H3 698 aa13.19□□□□□ -0.3
PRPF6-201ENST00000266079 UBL4BQ8N7F7 174 aa13.19□□□□□ -0.3
PRPF6-201ENST00000266079 BEST2Q8NFU1 509 aa13.19□□□□□ -0.3
PRPF6-201ENST00000266079 TTC8Q8TAM2 541 aa13.19□□□□□ -0.3
PRPF6-201ENST00000266079 SLC7A6OSQ96CW6 309 aaPredicted RBP13.19□□□□□ -0.3
PRPF6-201ENST00000266079 XYLT2Q9H1B5 865 aa13.19□□□□□ -0.3
PRPF6-201ENST00000266079 SMYD3Q9H7B4 428 aa13.19□□□□□ -0.3
PRPF6-201ENST00000266079 DCLRE1BQ9H816 532 aa13.19□□□□□ -0.3
PRPF6-201ENST00000266079 CNTN3Q9P232 1028 aa13.19□□□□□ -0.3
PRPF6-201ENST00000266079 COG5Q9UP83 839 aa13.19□□□□□ -0.3
PRPF6-201ENST00000266079 SNX9Q9Y5X1 595 aa13.19□□□□□ -0.3
PRPF6-201ENST00000266079 SCN1AP35498 2009 aa13.19□□□□□ -0.3
PRPF6-201ENST00000266079 C9IYK1 514 aa13.19□□□□□ -0.3
PRPF6-201ENST00000266079 I3L4J1 428 aa13.19□□□□□ -0.3
PRPF6-201ENST00000266079 ASS1P00966 412 aaKnown RBP13.19□□□□□ -0.3
PRPF6-201ENST00000266079 LMNAP02545 664 aaKnown RBP13.19□□□□□ -0.3
PRPF6-201ENST00000266079 SOX5P35711 763 aa13.19□□□□□ -0.3
PRPF6-201ENST00000266079 POLE2P56282 527 aa13.19□□□□□ -0.3
PRPF6-201ENST00000266079 CALCOCO2Q13137 446 aa13.19□□□□□ -0.3
PRPF6-201ENST00000266079 ALKAL1Q6UXT8 129 aa13.19□□□□□ -0.3
PRPF6-201ENST00000266079 OTOP2Q7RTS6 562 aa13.19□□□□□ -0.3
PRPF6-201ENST00000266079 CCDC105Q8IYK2 499 aa13.19□□□□□ -0.3
PRPF6-201ENST00000266079 HACE1Q8IYU2 909 aa13.19□□□□□ -0.3
PRPF6-201ENST00000266079 C7orf61Q8IZ16 206 aa13.19□□□□□ -0.3
PRPF6-201ENST00000266079 STK33Q9BYT3 514 aa13.19□□□□□ -0.3
PRPF6-201ENST00000266079 AAASQ9NRG9 546 aa13.19□□□□□ -0.3
PRPF6-201ENST00000266079 SCOCQ9UIL1 159 aa13.19□□□□□ -0.3
PRPF6-201ENST00000266079 ENPP3O14638 875 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 NVLO15381 856 aaKnown RBP13.18□□□□□ -0.3
PRPF6-201ENST00000266079 GSTA2P09210 222 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 ANK1P16157 1881 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 EPHB2P29323 1055 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 PBX3P40426 434 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 MFAP3P55082 362 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 CUL2Q13617 745 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 CYP1B1Q16678 543 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 ZNF667Q5HYK9 610 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 PPP1R21Q6ZMI0 780 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 FAM47EQ6ZV65 393 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 SLC47A2Q86VL8 602 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 SLC20A1Q8WUM9 679 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 UCMAQ8WVF2 138 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 KRT35Q92764 455 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms