RNA–Protein interactions for RNA: ENST00000265735.11

SGCE-201, Transcript of sarcoglycan epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCE, Length 1,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-201ENST00000265735 ERCC6LQ2NKX8 1250 aa13.35□□□□□ -0.27
SGCE-201ENST00000265735 TRIM67Q6ZTA4 783 aa13.35□□□□□ -0.27
SGCE-201ENST00000265735 SCN4BQ8IWT1 228 aa13.35□□□□□ -0.27
SGCE-201ENST00000265735 C12orf29Q8N999 325 aa13.35□□□□□ -0.27
SGCE-201ENST00000265735 LRRN4CLQ8ND94 238 aa13.35□□□□□ -0.27
SGCE-201ENST00000265735 STKLD1Q8NE28 680 aa13.35□□□□□ -0.27
SGCE-201ENST00000265735 GOLGA1Q92805 767 aa13.35□□□□□ -0.27
SGCE-201ENST00000265735 ASIC4Q96FT7 647 aa13.35□□□□□ -0.27
SGCE-201ENST00000265735 NT5C1AQ9BXI3 368 aa13.35□□□□□ -0.27
SGCE-201ENST00000265735 ATXN3LQ9H3M9 355 aa13.35□□□□□ -0.27
SGCE-201ENST00000265735 TRPV4Q9HBA0 871 aa13.35□□□□□ -0.27
SGCE-201ENST00000265735 UBE2TQ9NPD8 197 aaPredicted RBP13.35□□□□□ -0.27
SGCE-201ENST00000265735 CISHQ9NSE2 258 aa13.35□□□□□ -0.27
SGCE-201ENST00000265735 NAGPAQ9UK23 515 aa13.35□□□□□ -0.27
SGCE-201ENST00000265735 SAR1BQ9Y6B6 198 aa13.35□□□□□ -0.27
SGCE-201ENST00000265735 TECTAO75443 2155 aa13.35□□□□□ -0.27
SGCE-201ENST00000265735 ANAPC1Q9H1A4 1944 aa13.35□□□□□ -0.27
SGCE-201ENST00000265735 F8VP50 259 aa13.34□□□□□ -0.27
SGCE-201ENST00000265735 MOCS3O95396 460 aa13.34□□□□□ -0.27
SGCE-201ENST00000265735 ATP1A1P05023 1023 aaKnown RBP13.34□□□□□ -0.27
SGCE-201ENST00000265735 CD58P19256 250 aa13.34□□□□□ -0.27
SGCE-201ENST00000265735 WEE1P30291 646 aa13.34□□□□□ -0.27
SGCE-201ENST00000265735 ORC1Q13415 861 aa13.34□□□□□ -0.27
SGCE-201ENST00000265735 CUL2Q13617 745 aa13.34□□□□□ -0.27
SGCE-201ENST00000265735 IFI16Q16666 785 aaKnown RBP13.34□□□□□ -0.27
SGCE-201ENST00000265735 ARHGAP44Q17R89 818 aa13.34□□□□□ -0.27
SGCE-201ENST00000265735 FAM78AQ5JUQ0 283 aa13.34□□□□□ -0.27
SGCE-201ENST00000265735 ALKBH5Q6P6C2 394 aaKnown RBP13.34□□□□□ -0.27
SGCE-201ENST00000265735 FAM35AQ86V20 835 aa13.34□□□□□ -0.27
SGCE-201ENST00000265735 UBR7Q8N806 425 aa13.34□□□□□ -0.27
SGCE-201ENST00000265735 ST13P5Q8NFI4 369 aaPredicted RBP13.34□□□□□ -0.27
SGCE-201ENST00000265735 ELSPBP1Q96BH3 223 aa13.34□□□□□ -0.27
SGCE-201ENST00000265735 FAM81BQ96LP2 452 aa13.34□□□□□ -0.27
SGCE-201ENST00000265735 HNRNPABQ99729 332 aaKnown RBP13.34□□□□□ -0.27
SGCE-201ENST00000265735 CSNK1G1Q9HCP0 422 aa13.34□□□□□ -0.27
SGCE-201ENST00000265735 UXTQ9UBK9 157 aaPredicted RBP13.34□□□□□ -0.27
SGCE-201ENST00000265735 INTUQ9ULD6 942 aa13.34□□□□□ -0.27
SGCE-201ENST00000265735 SOBPA7XYQ1 873 aa13.34□□□□□ -0.27
SGCE-201ENST00000265735 ENC1O14682 589 aa13.34□□□□□ -0.27
SGCE-201ENST00000265735 ECI2O75521 394 aa13.34□□□□□ -0.27
SGCE-201ENST00000265735 SRFP11831 508 aa13.34□□□□□ -0.27
SGCE-201ENST00000265735 TBXAS1P24557 533 aaPredicted RBP13.34□□□□□ -0.27
SGCE-201ENST00000265735 MFAP3P55082 362 aa13.34□□□□□ -0.27
SGCE-201ENST00000265735 NAP1L1P55209 391 aaKnown RBP13.34□□□□□ -0.27
SGCE-201ENST00000265735 CKAP4Q07065 602 aaKnown RBP13.34□□□□□ -0.27
SGCE-201ENST00000265735 TAF12Q16514 161 aa13.34□□□□□ -0.27
SGCE-201ENST00000265735 STXBP5Q5T5C0 1151 aa13.34□□□□□ -0.27
SGCE-201ENST00000265735 TANGO2Q6ICL3 276 aa13.34□□□□□ -0.27
SGCE-201ENST00000265735 DENND5BQ6ZUT9 1274 aa13.34□□□□□ -0.27
SGCE-201ENST00000265735 BMP8AQ7Z5Y6 402 aa13.34□□□□□ -0.27
SGCE-201ENST00000265735 ARHGEF19Q8IW93 802 aa13.34□□□□□ -0.27
SGCE-201ENST00000265735 ZSCAN18Q8TBC5 510 aaPredicted RBP13.34□□□□□ -0.27
SGCE-201ENST00000265735 SMARCD2Q92925 531 aa13.34□□□□□ -0.27
SGCE-201ENST00000265735 SMARCD1Q96GM5 515 aa13.34□□□□□ -0.27
SGCE-201ENST00000265735 NT5C1BQ96P26 610 aa13.34□□□□□ -0.27
SGCE-201ENST00000265735 KCNK16Q96T55 309 aa13.34□□□□□ -0.27
SGCE-201ENST00000265735 TTLL2Q9BWV7 592 aa13.34□□□□□ -0.27
SGCE-201ENST00000265735 ZMYM5Q9UJ78 669 aa13.34□□□□□ -0.27
SGCE-201ENST00000265735 PATJQ8NI35 1801 aa13.33□□□□□ -0.28
SGCE-201ENST00000265735 MYH10P35580 1976 aa13.33□□□□□ -0.28
SGCE-201ENST00000265735 CTAGE15A4D2H0 777 aa13.33□□□□□ -0.28
SGCE-201ENST00000265735 PRR33A8MZF0 331 aa13.33□□□□□ -0.28
SGCE-201ENST00000265735 NARSO43776 548 aaKnown RBP13.33□□□□□ -0.28
SGCE-201ENST00000265735 CTAGE8P0CG41 777 aa13.33□□□□□ -0.28
SGCE-201ENST00000265735 CCDC130P13994 396 aa13.33□□□□□ -0.28
SGCE-201ENST00000265735 PRLRP16471 622 aa13.33□□□□□ -0.28
SGCE-201ENST00000265735 RAD23BP54727 409 aa13.33□□□□□ -0.28
SGCE-201ENST00000265735 USP46P62068 366 aa13.33□□□□□ -0.28
SGCE-201ENST00000265735 TMEM31Q5JXX7 168 aa13.33□□□□□ -0.28
SGCE-201ENST00000265735 GPR158Q5T848 1215 aa13.33□□□□□ -0.28
SGCE-201ENST00000265735 RSRC2Q7L4I2 434 aaKnown RBP13.33□□□□□ -0.28
SGCE-201ENST00000265735 CTAGE6Q86UF2 777 aa13.33□□□□□ -0.28
SGCE-201ENST00000265735 CTAGE4Q8IX94 777 aa13.33□□□□□ -0.28
SGCE-201ENST00000265735 SLC4A11Q8NBS3 891 aa13.33□□□□□ -0.28
SGCE-201ENST00000265735 ZMIZ2Q8NF64 920 aa13.33□□□□□ -0.28
SGCE-201ENST00000265735 SLC2A14Q8TDB8 520 aa13.33□□□□□ -0.28
SGCE-201ENST00000265735 CYFIP2Q96F07 1278 aa13.33□□□□□ -0.28
SGCE-201ENST00000265735 TMEM176AQ96HP8 235 aa13.33□□□□□ -0.28
SGCE-201ENST00000265735 PLA2G2FQ9BZM2 168 aa13.33□□□□□ -0.28
SGCE-201ENST00000265735 TASP1Q9H6P5 420 aa13.33□□□□□ -0.28
SGCE-201ENST00000265735 ZFP14Q9HCL3 533 aa13.33□□□□□ -0.28
SGCE-201ENST00000265735 SLC2A4RGQ9NR83 387 aa13.33□□□□□ -0.28
SGCE-201ENST00000265735 FAM49BQ9NUQ9 324 aa13.33□□□□□ -0.28
SGCE-201ENST00000265735 IL37Q9NZH6 218 aa13.33□□□□□ -0.28
SGCE-201ENST00000265735 NENFQ9UMX5 172 aa13.33□□□□□ -0.28
SGCE-201ENST00000265735 MAGED2Q9UNF1 606 aaPredicted RBP13.33□□□□□ -0.28
SGCE-201ENST00000265735 CAPN6Q9Y6Q1 641 aa13.33□□□□□ -0.28
SGCE-201ENST00000265735 FOXN3O00409 490 aaPredicted RBP13.32□□□□□ -0.28
SGCE-201ENST00000265735 DDX3XO00571 662 aaKnown RBP eCLIP13.32□□□□□ -0.282e-26■■■□□ 14.6
SGCE-201ENST00000265735 TNFRSF10BO14763 440 aa13.32□□□□□ -0.28
SGCE-201ENST00000265735 BEST1O76090 585 aa13.32□□□□□ -0.28
SGCE-201ENST00000265735 H2AFZP0C0S5 128 aa13.32□□□□□ -0.28
SGCE-201ENST00000265735 PNMA6AP0CW24 399 aaPredicted RBP13.32□□□□□ -0.28
SGCE-201ENST00000265735 ACO1P21399 889 aaKnown RBP13.32□□□□□ -0.28
SGCE-201ENST00000265735 TNFAIP3P21580 790 aa13.32□□□□□ -0.28
SGCE-201ENST00000265735 CYP4F8P98187 520 aa13.32□□□□□ -0.28
SGCE-201ENST00000265735 GCNT1Q02742 428 aa13.32□□□□□ -0.28
SGCE-201ENST00000265735 ZNF394Q53GI3 561 aa13.32□□□□□ -0.28
SGCE-201ENST00000265735 ARHGAP15Q53QZ3 475 aa13.32□□□□□ -0.28
SGCE-201ENST00000265735 TEX35Q5T0J7 233 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms