RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 TMEM260Q9NX78 707 aa12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 NUP188Q5SRE5 1749 aa12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 DUOX1Q9NRD9 1551 aa12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 GAS2O43903 313 aaKnown RBP12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 HLFQ16534 295 aa12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 FAM71AQ8IYT1 594 aa12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 PROCA1Q8NCQ7 364 aaPredicted RBP12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 RFWD2Q8NHY2 731 aa12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 CCDC90BQ9GZT6 254 aa12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 BRD8Q9H0E9 1235 aa12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 PDLIM1O00151 329 aa12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 MTA2O94776 668 aa12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 FGRP09769 529 aa12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 PRDX6P30041 224 aa12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 NFIL3Q16649 462 aa12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 TUBGCP3Q96CW5 907 aa12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 FAM213AQ9BRX8 229 aa12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 GPBP1L1Q9HC44 474 aaPredicted RBP12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 TRPC7Q9HCX4 862 aa12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 NXF1Q9UBU9 619 aaKnown RBP12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 A0A0G2JLW4 131 aa12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 PRR23AA6NEV1 266 aa12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 USP17L10C9JJH3 530 aa12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 VPS4BO75351 444 aa12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 BTKQ06187 659 aa12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 APTXQ7Z2E3 356 aaKnown RBP12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 SLC22A9Q8IVM8 553 aa12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 NDEL1Q9GZM8 345 aa12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 RIC8BQ9NVN3 520 aa12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 TBX20Q9UMR3 447 aa12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 SLC37A4O43826 429 aa12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 SHBGP04278 402 aa12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 SPANXN2Q5MJ10 180 aa12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 PXDNQ92626 1479 aa12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 ATMINO43313 823 aaPredicted RBP12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 USP1O94782 785 aa12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 BAIAP3O94812 1187 aa12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 FBXO33Q7Z6M2 555 aa12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 ZCCHC7Q8N3Z6 543 aaKnown RBP12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 AADATQ8N5Z0 425 aa12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 BLOC1S4Q9NUP1 217 aa12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 DCCP43146 1447 aa12.07□□□□□ -0.48
DNMT3A-201ENST00000264709 NUP205Q92621 2012 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 TRAFD1O14545 582 aaPredicted RBP12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 CYP19A1P11511 503 aaPredicted RBP12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 PHKA2P46019 1235 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 ACTR3P61158 418 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 GRIK3Q13003 919 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 SUSD4Q5VX71 490 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 LEMD2Q8NC56 503 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 CSADQ9Y600 493 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 CYP2C8P10632 490 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 TIMM50Q3ZCQ8 353 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 MICU2Q8IYU8 434 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 MCOLN2Q8IZK6 566 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 FAM71DQ8N9W8 422 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 PNMA3Q9UL41 463 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 NUP98P52948 1817 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 TJP1Q07157 1748 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 C3orf70A6NLC5 250 aaPredicted RBP12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 NKX1-1Q15270 411 aaPredicted RBP12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 ASB2Q96Q27 587 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 CEP44Q9C0F1 390 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 JPH1Q9HDC5 661 aaPredicted RBP12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 SPAG17Q6Q759 2223 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 SFI1A8K8P3 1242 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 MXD4Q14582 209 aaPredicted RBP12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 TMEM247A6NEH6 219 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 INO80B-WBP1J3KQ70 363 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 CYP1B1Q16678 543 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 DGUOKQ16854 277 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 OTOAQ7RTW8 1153 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 ECHDC2Q86YB7 292 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 CPA5Q8WXQ8 436 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 INO80BQ9C086 356 aaPredicted RBP12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 MED26O95402 600 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 TRAF7Q6Q0C0 670 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 NIM1KQ8IY84 436 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 KIF13AQ9H1H9 1805 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 RBP1P09455 135 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 FGFR2P21802 821 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 MSLNQ13421 630 aaPredicted RBP12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 ADAM28Q9UKQ2 775 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 VCLP18206 1134 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 BGNP21810 368 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 ERFEQ4G0M1 354 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 ARMCX4Q5H9R4 360 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 HYIQ5T013 277 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 SFRP1Q8N474 314 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 CLIC5Q9NZA1 410 aa12.06□□□□□ -0.48
DNMT3A-201ENST00000264709 KRT36O76013 467 aa12.05□□□□□ -0.48
DNMT3A-201ENST00000264709 NAPEPLDQ6IQ20 393 aa12.05□□□□□ -0.48
DNMT3A-201ENST00000264709 IRF2BP2Q7Z5L9 587 aa12.05□□□□□ -0.48
DNMT3A-201ENST00000264709 ATG4AQ8WYN0 398 aa12.05□□□□□ -0.48
DNMT3A-201ENST00000264709 RMDN3Q96TC7 470 aa12.05□□□□□ -0.48
DNMT3A-201ENST00000264709 HNRNPCL2B2RXH8 293 aa12.05□□□□□ -0.48
DNMT3A-201ENST00000264709 PPIL2Q13356 520 aa12.05□□□□□ -0.48
DNMT3A-201ENST00000264709 PDPK2PQ6A1A2 396 aa12.05□□□□□ -0.48
DNMT3A-201ENST00000264709 PPHLN1Q8NEY8 458 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms