RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 STAP1Q9ULZ2 295 aa16.95■□□□□ 0.3
CTCF-201ENST00000264010 ACTL7BQ9Y614 415 aa16.95■□□□□ 0.3
CTCF-201ENST00000264010 QPCTQ16769 361 aa16.94■□□□□ 0.3
CTCF-201ENST00000264010 SV2CQ496J9 727 aa16.94■□□□□ 0.3
CTCF-201ENST00000264010 MAP1SQ66K74 1059 aaPredicted RBP16.94■□□□□ 0.3
CTCF-201ENST00000264010 SMYD5Q6GMV2 418 aa16.94■□□□□ 0.3
CTCF-201ENST00000264010 PPM1NQ8N819 430 aa16.94■□□□□ 0.3
CTCF-201ENST00000264010 CDKL2Q92772 493 aa16.94■□□□□ 0.3
CTCF-201ENST00000264010 RAB3IPQ96QF0 476 aaPredicted RBP16.94■□□□□ 0.3
CTCF-201ENST00000264010 NFKBIZQ9BYH8 718 aa16.94■□□□□ 0.3
CTCF-201ENST00000264010 TXLNGQ9NUQ3 528 aa16.94■□□□□ 0.3
CTCF-201ENST00000264010 NOD1Q9Y239 953 aa16.94■□□□□ 0.3
CTCF-201ENST00000264010 TAF6P49848 677 aa16.94■□□□□ 0.3
CTCF-201ENST00000264010 FAM187BQ17R55 369 aa16.94■□□□□ 0.3
CTCF-201ENST00000264010 SLC10A6Q3KNW5 377 aa16.94■□□□□ 0.3
CTCF-201ENST00000264010 ANKRD20A3Q5VUR7 823 aa16.94■□□□□ 0.3
CTCF-201ENST00000264010 TBCBQ99426 244 aa16.94■□□□□ 0.3
CTCF-201ENST00000264010 GPATCH2LQ9NWQ4 482 aa16.94■□□□□ 0.3
CTCF-201ENST00000264010 CNMDO75829 334 aa16.94■□□□□ 0.3
CTCF-201ENST00000264010 FSBPO95073 299 aa16.94■□□□□ 0.3
CTCF-201ENST00000264010 APRTP07741 180 aa16.94■□□□□ 0.3
CTCF-201ENST00000264010 CHRM1P11229 460 aaPredicted RBP16.94■□□□□ 0.3
CTCF-201ENST00000264010 SKIP12755 728 aa16.94■□□□□ 0.3
CTCF-201ENST00000264010 KLF1Q13351 362 aaPredicted RBP16.94■□□□□ 0.3
CTCF-201ENST00000264010 AMHR2Q16671 573 aa16.94■□□□□ 0.3
CTCF-201ENST00000264010 NBPF20Q3BBV1 942 aa16.94■□□□□ 0.3
CTCF-201ENST00000264010 SYCP2LQ5T4T6 812 aa16.94■□□□□ 0.3
CTCF-201ENST00000264010 DSTYKQ6XUX3 929 aa16.94■□□□□ 0.3
CTCF-201ENST00000264010 TRIM42Q8IWZ5 723 aa16.94■□□□□ 0.3
CTCF-201ENST00000264010 DTX3LQ8TDB6 740 aa16.94■□□□□ 0.3
CTCF-201ENST00000264010 XYLT2Q9H1B5 865 aa16.94■□□□□ 0.3
CTCF-201ENST00000264010 C10orf88Q9H8K7 445 aa16.94■□□□□ 0.3
CTCF-201ENST00000264010 GBA2Q9HCG7 927 aaPredicted RBP16.94■□□□□ 0.3
CTCF-201ENST00000264010 KLK14Q9P0G3 267 aa16.94■□□□□ 0.3
CTCF-201ENST00000264010 CFAP73A6NFT4 308 aa16.93■□□□□ 0.3
CTCF-201ENST00000264010 C4orf22Q6V702 233 aa16.93■□□□□ 0.3
CTCF-201ENST00000264010 SREK1Q8WXA9 508 aaKnown RBP16.93■□□□□ 0.3
CTCF-201ENST00000264010 KCNN1Q92952 543 aa16.93■□□□□ 0.3
CTCF-201ENST00000264010 ATP2A3Q93084 1043 aa16.93■□□□□ 0.3
CTCF-201ENST00000264010 KATNAL1Q9BW62 490 aa16.93■□□□□ 0.3
CTCF-201ENST00000264010 DCTN3O75935 186 aa16.93■□□□□ 0.3
CTCF-201ENST00000264010 CDH5P33151 784 aaPredicted RBP16.93■□□□□ 0.3
CTCF-201ENST00000264010 BCAT1P54687 386 aa16.93■□□□□ 0.3
CTCF-201ENST00000264010 ZNF200P98182 395 aaPredicted RBP16.93■□□□□ 0.3
CTCF-201ENST00000264010 DUSP28Q4G0W2 176 aa16.93■□□□□ 0.3
CTCF-201ENST00000264010 FBXO41Q8TF61 875 aa16.93■□□□□ 0.3
CTCF-201ENST00000264010 BHMG1C9JSJ3 638 aaPredicted RBP16.93■□□□□ 0.3
CTCF-201ENST00000264010 ALOX15BO15296 676 aa16.93■□□□□ 0.3
CTCF-201ENST00000264010 TCF4P15884 667 aa16.93■□□□□ 0.3
CTCF-201ENST00000264010 RPL22P35268 128 aaKnown RBP16.93■□□□□ 0.3
CTCF-201ENST00000264010 SCTRP47872 440 aa16.93■□□□□ 0.3
CTCF-201ENST00000264010 SLC6A3Q01959 620 aa16.93■□□□□ 0.3
CTCF-201ENST00000264010 FBXO47Q5MNV8 452 aa16.93■□□□□ 0.3
CTCF-201ENST00000264010 LCLAT1Q6UWP7 414 aa16.93■□□□□ 0.3
CTCF-201ENST00000264010 FAM183BPQ6ZVS7 135 aa16.93■□□□□ 0.3
CTCF-201ENST00000264010 TSNARE1Q96NA8 513 aa16.93■□□□□ 0.3
CTCF-201ENST00000264010 COPEO14579 308 aa16.92■□□□□ 0.3
CTCF-201ENST00000264010 TSPAN1O60635 241 aa16.92■□□□□ 0.3
CTCF-201ENST00000264010 TRPA1O75762 1119 aa16.92■□□□□ 0.3
CTCF-201ENST00000264010 KRT38O76015 456 aa16.92■□□□□ 0.3
CTCF-201ENST00000264010 GHRP10912 638 aa16.92■□□□□ 0.3
CTCF-201ENST00000264010 OGDHQ02218 1023 aa16.92■□□□□ 0.3
CTCF-201ENST00000264010 C15orf59Q2T9L4 293 aaPredicted RBP16.92■□□□□ 0.3
CTCF-201ENST00000264010 ANKRD20A8PQ5CZ79 823 aa16.92■□□□□ 0.3
CTCF-201ENST00000264010 EFHC1Q5JVL4 640 aa16.92■□□□□ 0.3
CTCF-201ENST00000264010 GPR142Q7Z601 462 aa16.92■□□□□ 0.3
CTCF-201ENST00000264010 ZDHHC17Q8IUH5 632 aa16.92■□□□□ 0.3
CTCF-201ENST00000264010 CKAP2Q8WWK9 683 aa16.92■□□□□ 0.3
CTCF-201ENST00000264010 BCO2Q9BYV7 579 aa16.92■□□□□ 0.3
CTCF-201ENST00000264010 PAIP2BQ9ULR5 123 aaKnown RBP16.92■□□□□ 0.3
CTCF-201ENST00000264010 ARHGAP42A6NI28 874 aa16.92■□□□□ 0.3
CTCF-201ENST00000264010 LPXNO60711 386 aa16.92■□□□□ 0.3
CTCF-201ENST00000264010 RCN2Q14257 317 aa16.92■□□□□ 0.3
CTCF-201ENST00000264010 HIPK4Q8NE63 616 aa16.92■□□□□ 0.3
CTCF-201ENST00000264010 ZC3H7BQ9UGR2 993 aaKnown RBP16.92■□□□□ 0.3
CTCF-201ENST00000264010 SIX4Q9UIU6 781 aa16.92■□□□□ 0.3
CTCF-201ENST00000264010 H3BRJ5 948 aa16.92■□□□□ 0.3
CTCF-201ENST00000264010 ZWINTO95229 277 aa16.92■□□□□ 0.3
CTCF-201ENST00000264010 CPT1AP50416 773 aa16.92■□□□□ 0.3
CTCF-201ENST00000264010 UNC93AQ86WB7 457 aa16.92■□□□□ 0.3
CTCF-201ENST00000264010 PDCD7Q8N8D1 485 aaKnown RBP16.92■□□□□ 0.3
CTCF-201ENST00000264010 PIP4K2CQ8TBX8 421 aa16.92■□□□□ 0.3
CTCF-201ENST00000264010 FAM124BQ9H5Z6 455 aaPredicted RBP16.92■□□□□ 0.3
CTCF-201ENST00000264010 DNAJC25-GNG10A0A024R161 153 aa16.91■□□□□ 0.3
CTCF-201ENST00000264010 GOLGA8RI6L899 631 aa16.91■□□□□ 0.3
CTCF-201ENST00000264010 PTPN7P35236 360 aa16.91■□□□□ 0.3
CTCF-201ENST00000264010 BST2Q10589 180 aaKnown RBP16.91■□□□□ 0.3
CTCF-201ENST00000264010 IFRD2Q12894 506 aaPredicted RBP16.91■□□□□ 0.3
CTCF-201ENST00000264010 SCUBE3Q8IX30 993 aa16.91■□□□□ 0.3
CTCF-201ENST00000264010 TTC17Q96AE7 1141 aa16.91■□□□□ 0.3
CTCF-201ENST00000264010 ECT2Q9H8V3 914 aa16.91■□□□□ 0.3
CTCF-201ENST00000264010 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.91■□□□□ 0.3
CTCF-201ENST00000264010 BTBD19C9JJ37 291 aa16.91■□□□□ 0.3
CTCF-201ENST00000264010 CIB2O75838 187 aa16.91■□□□□ 0.3
CTCF-201ENST00000264010 KRT4P19013 534 aa16.91■□□□□ 0.3
CTCF-201ENST00000264010 TGM2P21980 687 aa16.91■□□□□ 0.3
CTCF-201ENST00000264010 PROZP22891 400 aa16.91■□□□□ 0.3
CTCF-201ENST00000264010 AXLP30530 894 aa16.91■□□□□ 0.3
CTCF-201ENST00000264010 DPYSL3Q14195 570 aa16.91■□□□□ 0.3
CTCF-201ENST00000264010 TAF1CQ15572 869 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms