RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 DCLK2Q8N568 766 aa16.97■□□□□ 0.31
USE1-201ENST00000263897 NELFBQ8WX92 580 aa16.97■□□□□ 0.31
USE1-201ENST00000263897 EZH1Q92800 747 aaPredicted RBP16.97■□□□□ 0.31
USE1-201ENST00000263897 CHMP5Q9NZZ3 219 aa16.97■□□□□ 0.31
USE1-201ENST00000263897 BICDL2A1A5D9 508 aa16.96■□□□□ 0.31
USE1-201ENST00000263897 SCAMP3O14828 347 aaKnown RBP16.96■□□□□ 0.31
USE1-201ENST00000263897 PMM2O15305 246 aa16.96■□□□□ 0.31
USE1-201ENST00000263897 HRO43593 1189 aa16.96■□□□□ 0.31
USE1-201ENST00000263897 TLR5O60602 858 aa16.96■□□□□ 0.31
USE1-201ENST00000263897 RNF40O75150 1001 aa16.96■□□□□ 0.31
USE1-201ENST00000263897 TBX18O95935 607 aa16.96■□□□□ 0.31
USE1-201ENST00000263897 HOXC13P31276 330 aa16.96■□□□□ 0.31
USE1-201ENST00000263897 CNR2P34972 360 aa16.96■□□□□ 0.31
USE1-201ENST00000263897 FMO5P49326 533 aa16.96■□□□□ 0.31
USE1-201ENST00000263897 CUL2Q13617 745 aa16.96■□□□□ 0.31
USE1-201ENST00000263897 CCDC40Q4G0X9 1142 aa16.96■□□□□ 0.31
USE1-201ENST00000263897 ARHGAP17Q68EM7 881 aa16.96■□□□□ 0.31
USE1-201ENST00000263897 HEATR6Q6AI08 1181 aaKnown RBP16.96■□□□□ 0.31
USE1-201ENST00000263897 LONP2Q86WA8 852 aa16.96■□□□□ 0.31
USE1-201ENST00000263897 OTUB2Q96DC9 234 aa16.96■□□□□ 0.31
USE1-201ENST00000263897 HINFPQ9BQA5 517 aa16.96■□□□□ 0.31
USE1-201ENST00000263897 UBXN6Q9BZV1 441 aa16.96■□□□□ 0.31
USE1-201ENST00000263897 NACA2Q9H009 215 aa16.96■□□□□ 0.31
USE1-201ENST00000263897 CYLDQ9NQC7 956 aa16.96■□□□□ 0.31
USE1-201ENST00000263897 OSER1Q9NX31 292 aa16.96■□□□□ 0.31
USE1-201ENST00000263897 SMG5Q9UPR3 1016 aaKnown RBP16.96■□□□□ 0.31
USE1-201ENST00000263897 SH3BP1Q9Y3L3 701 aa16.96■□□□□ 0.31
USE1-201ENST00000263897 CFAP54Q96N23 3096 aa16.96■□□□□ 0.31
USE1-201ENST00000263897 CYP26A1O43174 497 aa16.95■□□□□ 0.3
USE1-201ENST00000263897 ATP5C1P36542 298 aaKnown RBP16.95■□□□□ 0.3
USE1-201ENST00000263897 UBE2HP62256 183 aa16.95■□□□□ 0.3
USE1-201ENST00000263897 ANKRD52Q8NB46 1076 aa16.95■□□□□ 0.3
USE1-201ENST00000263897 WBP2Q969T9 261 aa16.95■□□□□ 0.3
USE1-201ENST00000263897 KLF16Q9BXK1 252 aaPredicted RBP16.95■□□□□ 0.3
USE1-201ENST00000263897 NMUR1Q9HB89 426 aa16.95■□□□□ 0.3
USE1-201ENST00000263897 NCDNQ9UBB6 729 aa16.95■□□□□ 0.3
USE1-201ENST00000263897 SLC8A2Q9UPR5 921 aa16.95■□□□□ 0.3
USE1-201ENST00000263897 USP3Q9Y6I4 520 aa16.95■□□□□ 0.3
USE1-201ENST00000263897 SDK1Q7Z5N4 2213 aa16.94■□□□□ 0.3
USE1-201ENST00000263897 A0A1W2PQH9 124 aa16.94■□□□□ 0.3
USE1-201ENST00000263897 ADH1CP00326 375 aa16.94■□□□□ 0.3
USE1-201ENST00000263897 RARGP13631 454 aa16.94■□□□□ 0.3
USE1-201ENST00000263897 SLC6A11P48066 632 aa16.94■□□□□ 0.3
USE1-201ENST00000263897 PSEN1P49768 467 aa16.94■□□□□ 0.3
USE1-201ENST00000263897 STX17P56962 302 aa16.94■□□□□ 0.3
USE1-201ENST00000263897 YWHAEP62258 255 aaKnown RBP16.94■□□□□ 0.3
USE1-201ENST00000263897 LRMPQ12912 555 aa16.94■□□□□ 0.3
USE1-201ENST00000263897 LY6G5CQ5SRR4 150 aa16.94■□□□□ 0.3
USE1-201ENST00000263897 HTR3DQ70Z44 454 aa16.94■□□□□ 0.3
USE1-201ENST00000263897 CCDC186Q7Z3E2 898 aa16.94■□□□□ 0.3
USE1-201ENST00000263897 SCD5Q86SK9 330 aa16.94■□□□□ 0.3
USE1-201ENST00000263897 WDR5BQ86VZ2 330 aa16.94■□□□□ 0.3
USE1-201ENST00000263897 KIAA2013Q8IYS2 634 aa16.94■□□□□ 0.3
USE1-201ENST00000263897 ZNF276Q8N554 614 aa16.94■□□□□ 0.3
USE1-201ENST00000263897 CAMKK1Q8N5S9 505 aa16.94■□□□□ 0.3
USE1-201ENST00000263897 RPLP0P6Q8NHW5 317 aa16.94■□□□□ 0.3
USE1-201ENST00000263897 CCDC26Q8TAB7 109 aa16.94■□□□□ 0.3
USE1-201ENST00000263897 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.94■□□□□ 0.3
USE1-201ENST00000263897 KIAA1468Q9P260 1216 aa16.94■□□□□ 0.3
USE1-201ENST00000263897 CTNND2Q9UQB3 1225 aa16.94■□□□□ 0.3
USE1-201ENST00000263897 CEP250Q9BV73 2442 aa16.94■□□□□ 0.3
USE1-201ENST00000263897 A0A0A0MRY4 1105 aa16.93■□□□□ 0.3
USE1-201ENST00000263897 CCDC163A0A0D9SF12 145 aa16.93■□□□□ 0.3
USE1-201ENST00000263897 K7EQS6 105 aa16.93■□□□□ 0.3
USE1-201ENST00000263897 P4HA2O15460 535 aa16.93■□□□□ 0.3
USE1-201ENST00000263897 TBXAS1P24557 533 aaPredicted RBP16.93■□□□□ 0.3
USE1-201ENST00000263897 EIF2DP41214 584 aaKnown RBP16.93■□□□□ 0.3
USE1-201ENST00000263897 PAK1Q13153 545 aa16.93■□□□□ 0.3
USE1-201ENST00000263897 SIM2Q14190 667 aaPredicted RBP16.93■□□□□ 0.3
USE1-201ENST00000263897 CAMK4Q16566 473 aa16.93■□□□□ 0.3
USE1-201ENST00000263897 KLHDC10Q6PID8 442 aa16.93■□□□□ 0.3
USE1-201ENST00000263897 SYT13Q7L8C5 426 aa16.93■□□□□ 0.3
USE1-201ENST00000263897 BBS7Q8IWZ6 715 aa16.93■□□□□ 0.3
USE1-201ENST00000263897 UBR7Q8N806 425 aa16.93■□□□□ 0.3
USE1-201ENST00000263897 TRIML1Q8N9V2 468 aa16.93■□□□□ 0.3
USE1-201ENST00000263897 LMO3Q8TAP4 145 aa16.93■□□□□ 0.3
USE1-201ENST00000263897 SECISBP2LQ93073 1101 aaKnown RBP16.93■□□□□ 0.3
USE1-201ENST00000263897 PNKPQ96T60 521 aa16.93■□□□□ 0.3
USE1-201ENST00000263897 SRRTQ9BXP5 876 aaKnown RBP16.93■□□□□ 0.3
USE1-201ENST00000263897 POLR3BQ9NW08 1133 aaPredicted RBP16.93■□□□□ 0.3
USE1-201ENST00000263897 CLIC5Q9NZA1 410 aa16.93■□□□□ 0.3
USE1-201ENST00000263897 NAGPAQ9UK23 515 aa16.93■□□□□ 0.3
USE1-201ENST00000263897 RAB23Q9ULC3 237 aa16.93■□□□□ 0.3
USE1-201ENST00000263897 KIAA1257Q9ULG3 409 aa16.93■□□□□ 0.3
USE1-201ENST00000263897 MYO16Q9Y6X6 1858 aa16.93■□□□□ 0.3
USE1-201ENST00000263897 GREM1O60565 184 aa16.92■□□□□ 0.3
USE1-201ENST00000263897 GNA14O95837 355 aa16.92■□□□□ 0.3
USE1-201ENST00000263897 IRF1P10914 325 aa16.92■□□□□ 0.3
USE1-201ENST00000263897 ADH5P11766 374 aa16.92■□□□□ 0.3
USE1-201ENST00000263897 PLA2G4AP47712 749 aa16.92■□□□□ 0.3
USE1-201ENST00000263897 PXNP49023 591 aaPredicted RBP16.92■□□□□ 0.3
USE1-201ENST00000263897 MARSP56192 900 aaKnown RBP16.92■□□□□ 0.3
USE1-201ENST00000263897 SLC8A3P57103 927 aa16.92■□□□□ 0.3
USE1-201ENST00000263897 GAD2Q05329 585 aa16.92■□□□□ 0.3
USE1-201ENST00000263897 CETN1Q12798 172 aa16.92■□□□□ 0.3
USE1-201ENST00000263897 SRSF5Q13243 272 aaKnown RBP16.92■□□□□ 0.3
USE1-201ENST00000263897 SGO2Q562F6 1265 aa16.92■□□□□ 0.3
USE1-201ENST00000263897 RAB41Q5JT25 222 aa16.92■□□□□ 0.3
USE1-201ENST00000263897 C10orf120Q5SQS8 335 aa16.92■□□□□ 0.3
USE1-201ENST00000263897 LAIR1Q6GTX8 287 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms