RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 TOP3BO95985 862 aaKnown RBP16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 VHLP40337 213 aa16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 TAP1Q03518 808 aa16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 RWDD4Q6NW29 188 aaKnown RBP16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 DCLRE1BQ9H816 532 aa16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 MTO1Q9Y2Z2 717 aaKnown RBP16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 STARD13Q9Y3M8 1113 aa16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 HES2Q9Y543 173 aa16.81■□□□□ 0.28
PDZRN3-201ENST00000263666 LRCH4O75427 683 aa16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 MICAL2O94851 1124 aa16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 STAG3L1P0CL83 205 aa16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 GLRBP48167 497 aa16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 BTKQ06187 659 aa16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 TTLL4Q14679 1199 aa16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 KHDC1Q4VXA5 237 aaKnown RBP16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 PLEKHA7Q6IQ23 1121 aa16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 BRSK2Q8IWQ3 736 aa16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 B3GNT5Q9BYG0 378 aa16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 NMUR2Q9GZQ4 415 aa16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 TSPAN16Q9UKR8 245 aa16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 A0A0B4J269 797 aa16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 LYPLA1O75608 230 aaPredicted RBP16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 ASMTLO95671 621 aa16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 PTPRAP18433 802 aa16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 SLC12A2P55011 1212 aa16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 HADHBP55084 474 aaKnown RBP16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 BST1Q10588 318 aa16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 HIC1Q14526 733 aa16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 TCHHL1Q5QJ38 904 aaPredicted RBP16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 TTC39BQ5VTQ0 682 aaPredicted RBP16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 IZUMO2Q6UXV1 221 aa16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 CLNKQ7Z7G1 428 aa16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 TMEM192Q8IY95 271 aa16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 RYBPQ8N488 228 aaPredicted RBP16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 PYDC1Q8WXC3 89 aa16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 ZCWPW1Q9H0M4 648 aa16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 E9PBE3 544 aa16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 KCNK1O00180 336 aa16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 MAFGO15525 162 aa16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 UGT1A9O60656 530 aa16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 KLHL41O60662 606 aa16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 GNAT1P11488 350 aa16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 CA8P35219 290 aa16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 UBAP2LQ14157 1087 aaKnown RBP16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 ZNF268Q14587 947 aaPredicted RBP16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 DCAF6Q58WW2 860 aa16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 UGT1A7Q9HAW7 530 aa16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 UGT1A10Q9HAW8 530 aa16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 UGT1A8Q9HAW9 530 aa16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 SLC17A6Q9P2U8 582 aa16.8■□□□□ 0.28
PDZRN3-201ENST00000263666 ALOX15BO15296 676 aa16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 IL1R2P27930 398 aa16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 NIPA1Q7RTP0 329 aa16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 C12orf50Q8NA57 414 aaPredicted RBP16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 ADAM32Q8TC27 787 aa16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 ALKBH8Q96BT7 664 aaKnown RBP16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 OXNAD1Q96HP4 312 aaPredicted RBP16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 ZNF570Q96NI8 536 aa16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 TMEM109Q9BVC6 243 aa16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 PAK5Q9P286 719 aa16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 LMNAP02545 664 aaKnown RBP16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 CDKN2BP42772 138 aa16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 SLC25A3Q00325 362 aa16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 SP2Q02086 613 aa16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 POU5F1BQ06416 359 aa16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 KIZQ2M2Z5 673 aa16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 SLC26A11Q86WA9 606 aa16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 PHF13Q86YI8 300 aaPredicted RBP16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 OPTNQ96CV9 577 aa16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 BTBD10Q9BSF8 475 aa16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 TUBB6Q9BUF5 446 aa16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 LACTBL1A8MY62 500 aa16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 KCNA2P16389 499 aa16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 MSX2P35548 267 aaPredicted RBP16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 AP2B1P63010 937 aa16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 MGAT5Q09328 741 aa16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 PEX6Q13608 980 aa16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 RBBP5Q15291 538 aaKnown RBP16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 MMEL1Q495T6 779 aa16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 JADE1Q6IE81 842 aa16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 WDR49Q8IV35 697 aa16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 PPWD1Q96BP3 646 aaKnown RBP16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 NT5C1AQ9BXI3 368 aa16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 RRAGCQ9HB90 399 aa16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 MAN1C1Q9NR34 630 aa16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 HMGXB4Q9UGU5 601 aa16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 COQ4Q9Y3A0 265 aa16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 MYO18AQ92614 2054 aaKnown RBP16.79■□□□□ 0.28
PDZRN3-201ENST00000263666 MTA2O94776 668 aa16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 AMPD1P23109 780 aa16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 SIX6OS1Q8N1H7 587 aa16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 FGD4Q96M96 766 aa16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 ARHGAP28Q9P2N2 729 aa16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 TLK1Q9UKI8 766 aa16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 MT-CO1P00395 513 aa16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 ASS1P00966 412 aaKnown RBP16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 ENO3P13929 434 aaPredicted RBP16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 IVDP26440 423 aa16.78■□□□□ 0.28
PDZRN3-201ENST00000263666 VGLL4Q14135 290 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms