RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 NT5C3BQ969T7 300 aa23.94■■□□□ 1.42
SMARCB1-201ENST00000263121 RNF25Q96BH1 459 aaPredicted RBP23.94■■□□□ 1.42
SMARCB1-201ENST00000263121 ACSF2Q96CM8 615 aaPredicted RBP23.94■■□□□ 1.42
SMARCB1-201ENST00000263121 C8orf48Q96LL4 319 aa23.94■■□□□ 1.42
SMARCB1-201ENST00000263121 PNKPQ96T60 521 aa23.94■■□□□ 1.42
SMARCB1-201ENST00000263121 PARD6BQ9BYG5 372 aa23.94■■□□□ 1.42
SMARCB1-201ENST00000263121 BACE2Q9Y5Z0 518 aa23.94■■□□□ 1.42
SMARCB1-201ENST00000263121 C3orf70A6NLC5 250 aaPredicted RBP23.93■■□□□ 1.42
SMARCB1-201ENST00000263121 PI4K2BG5E9Z4 385 aa23.93■■□□□ 1.42
SMARCB1-201ENST00000263121 SOD2P04179 222 aa23.93■■□□□ 1.42
SMARCB1-201ENST00000263121 FYNP06241 537 aa23.93■■□□□ 1.42
SMARCB1-201ENST00000263121 RALAP11233 206 aa23.93■■□□□ 1.42
SMARCB1-201ENST00000263121 CPB1P15086 417 aa23.93■■□□□ 1.42
SMARCB1-201ENST00000263121 KLF1Q13351 362 aaPredicted RBP23.93■■□□□ 1.42
SMARCB1-201ENST00000263121 SMTNL2Q2TAL5 461 aa23.93■■□□□ 1.42
SMARCB1-201ENST00000263121 SLC25A52Q3SY17 297 aa23.93■■□□□ 1.42
SMARCB1-201ENST00000263121 MFSD7Q6UXD7 560 aa23.93■■□□□ 1.42
SMARCB1-201ENST00000263121 STRADAQ7RTN6 431 aa23.93■■□□□ 1.42
SMARCB1-201ENST00000263121 BNIPLQ7Z465 357 aa23.93■■□□□ 1.42
SMARCB1-201ENST00000263121 PRELID2Q8N945 189 aa23.93■■□□□ 1.42
SMARCB1-201ENST00000263121 CMASQ8NFW8 434 aaPredicted RBP23.93■■□□□ 1.42
SMARCB1-201ENST00000263121 TMEM169Q96HH4 297 aa23.93■■□□□ 1.42
SMARCB1-201ENST00000263121 PGLYRP2Q96PD5 576 aa23.93■■□□□ 1.42
SMARCB1-201ENST00000263121 OSBPL8Q9BZF1 889 aa23.93■■□□□ 1.42
SMARCB1-201ENST00000263121 DDX47Q9H0S4 455 aaKnown RBP23.93■■□□□ 1.42
SMARCB1-201ENST00000263121 SPG21Q9NZD8 308 aa23.93■■□□□ 1.42
SMARCB1-201ENST00000263121 MTMR11A4FU01 709 aa23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 TRIM66O15016 1216 aa23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 PRPSAP2O60256 369 aa23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 VNN2O95498 520 aa23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 RARAP10276 462 aa23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 CETN2P41208 172 aa23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 SLC5A3P53794 718 aa23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 PPP2R5EQ16537 467 aa23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 CYP1B1Q16678 543 aa23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 KCNT1Q5JUK3 1230 aa23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 ZFYVE27Q5T4F4 411 aa23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 OTUD1Q5VV17 481 aaPredicted RBP23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 SLC8B1Q6J4K2 584 aa23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 SPOCD1Q6ZMY3 1216 aa23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 SCN4BQ8IWT1 228 aa23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 ATAD1Q8NBU5 361 aa23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 SPPL2BQ8TCT7 592 aa23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 MAIP1Q8WWC4 291 aa23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 RIN2Q8WYP3 895 aaPredicted RBP23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 TBCBQ99426 244 aa23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 NPY6RQ99463 290 aa23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 HERC2P3Q9BVR0 1158 aa23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 SLITRK6Q9H5Y7 841 aa23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 CXXC1Q9P0U4 656 aaPredicted RBP23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 RAB21Q9UL25 225 aa23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 MTUS1Q9ULD2 1270 aa23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 LRRD1A4D1F6 860 aa23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 LTFP02788 710 aa23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 ARPP19P56211 112 aa23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 LLGL1Q15334 1064 aa23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 PSMD5Q16401 504 aa23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 TAZQ16635 292 aa23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 DCAF6Q58WW2 860 aa23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 RNF19BQ6ZMZ0 732 aa23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 FBXO22Q8NEZ5 403 aa23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 SCAMP5Q8TAC9 235 aa23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 C2orf15Q8WU43 125 aaKnown RBP23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 CDY1Q9Y6F8 540 aa23.92■■□□□ 1.42
SMARCB1-201ENST00000263121 PHF2O75151 1096 aa23.91■■□□□ 1.42
SMARCB1-201ENST00000263121 ENDOD1O94919 500 aa23.91■■□□□ 1.42
SMARCB1-201ENST00000263121 H2AFXP16104 143 aaPredicted RBP23.91■■□□□ 1.42
SMARCB1-201ENST00000263121 CDKN2BP42772 138 aa23.91■■□□□ 1.42
SMARCB1-201ENST00000263121 SULT1E1P49888 294 aa23.91■■□□□ 1.42
SMARCB1-201ENST00000263121 SYPL2Q5VXT5 272 aa23.91■■□□□ 1.42
SMARCB1-201ENST00000263121 TTC9BQ8N6N2 239 aa23.91■■□□□ 1.42
SMARCB1-201ENST00000263121 C12orf50Q8NA57 414 aaPredicted RBP23.91■■□□□ 1.42
SMARCB1-201ENST00000263121 HDAC7Q8WUI4 952 aa23.91■■□□□ 1.42
SMARCB1-201ENST00000263121 TEKT4Q8WW24 435 aa23.91■■□□□ 1.42
SMARCB1-201ENST00000263121 CALCOCO1Q9P1Z2 691 aa23.91■■□□□ 1.42
SMARCB1-201ENST00000263121 STAP1Q9ULZ2 295 aa23.91■■□□□ 1.42
SMARCB1-201ENST00000263121 hCG_1818297A0A087WSY0 165 aa23.9■■□□□ 1.42
SMARCB1-201ENST00000263121 ADAM12O43184 909 aa23.9■■□□□ 1.42
SMARCB1-201ENST00000263121 RAD51CO43502 376 aa23.9■■□□□ 1.42
SMARCB1-201ENST00000263121 LINC00271P0C7V0 271 aa23.9■■□□□ 1.42
SMARCB1-201ENST00000263121 KDELR1P24390 212 aa23.9■■□□□ 1.42
SMARCB1-201ENST00000263121 MRPS25P82663 173 aaKnown RBP23.9■■□□□ 1.42
SMARCB1-201ENST00000263121 DSG1Q02413 1049 aa23.9■■□□□ 1.42
SMARCB1-201ENST00000263121 BOLA3Q53S33 107 aa23.9■■□□□ 1.42
SMARCB1-201ENST00000263121 ODF2Q5BJF6 829 aa23.9■■□□□ 1.42
SMARCB1-201ENST00000263121 TFDP3Q5H9I0 405 aa23.9■■□□□ 1.42
SMARCB1-201ENST00000263121 WDR93Q6P2C0 686 aa23.9■■□□□ 1.42
SMARCB1-201ENST00000263121 DDX53Q86TM3 631 aaKnown RBP23.9■■□□□ 1.42
SMARCB1-201ENST00000263121 HERVK_113Q902F9 699 aa23.9■■□□□ 1.42
SMARCB1-201ENST00000263121 HEMGNQ9BXL5 484 aa23.9■■□□□ 1.42
SMARCB1-201ENST00000263121 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.9■■□□□ 1.42
SMARCB1-201ENST00000263121 DMGDHQ9UI17 866 aaKnown RBP23.9■■□□□ 1.42
SMARCB1-201ENST00000263121 NAALADL1Q9UQQ1 740 aa23.9■■□□□ 1.42
SMARCB1-201ENST00000263121 TUBBP07437 444 aa23.89■■□□□ 1.42
SMARCB1-201ENST00000263121 SYN1P17600 705 aa23.89■■□□□ 1.42
SMARCB1-201ENST00000263121 GPR15P49685 360 aa23.89■■□□□ 1.42
SMARCB1-201ENST00000263121 ARSEP51690 589 aa23.89■■□□□ 1.42
SMARCB1-201ENST00000263121 PITX1P78337 314 aaPredicted RBP23.89■■□□□ 1.42
SMARCB1-201ENST00000263121 DDR2Q16832 855 aa23.89■■□□□ 1.42
SMARCB1-201ENST00000263121 KIAA1841Q6NSI8 718 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms