RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 FAM131BQ86XD5 332 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 MAGED4Q96JG8 741 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 DGCR6LQ9BY27 220 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 PRKAG2Q9UGJ0 569 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 ZNF862O60290 1169 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 BANF1O75531 89 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 MFN2O95140 757 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 MYBL2P10244 700 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 SOX6P35712 828 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 ELK3P41970 407 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 ST3GAL1Q11201 340 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 NFIL3Q16649 462 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 NAPEPLDQ6IQ20 393 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 C16orf46Q6P387 395 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 SYTL1Q8IYJ3 562 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 CALML6Q8TD86 181 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 LRRN4Q8WUT4 740 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 ZNF512Q96ME7 567 aaPredicted RBP12.44□□□□□ -0.42
SMG6-201ENST00000263073 NMRK2Q9NPI5 230 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 DYRK4Q9NR20 520 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 SELENONQ9NZV5 590 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 VAC14Q08AM6 782 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 PTK6Q13882 451 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 SBK1Q52WX2 424 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 AGAP9Q5VTM2 703 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 UNC45BQ8IWX7 931 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 TTC39CQ8N584 583 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 OR6Y1Q8NGX8 325 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 UBASH3BQ8TF42 649 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 KRT35Q92764 455 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 WDCPQ9H6R7 721 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 PIDD1Q9HB75 910 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 USP18Q9UMW8 372 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 PLEKHG2Q9H7P9 1386 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 SDR42E2A6NKP2 422 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 ABCB1P08183 1280 aaPredicted RBP12.43□□□□□ -0.42
SMG6-201ENST00000263073 CHI3L1P36222 383 aaPredicted RBP12.43□□□□□ -0.42
SMG6-201ENST00000263073 ATP6AP1LQ52LC2 224 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 FICDQ9BVA6 458 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 SLC7A5P2Q9GIP4 190 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 C6orf203Q9P0P8 240 aaPredicted RBP12.43□□□□□ -0.42
SMG6-201ENST00000263073 FARP1Q9Y4F1 1045 aaPredicted RBP12.43□□□□□ -0.42
SMG6-201ENST00000263073 CAMSAP1Q5T5Y3 1602 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 F8W810 466 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 FAM20BO75063 409 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 PRLRP16471 622 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 ADARP55265 1226 aaKnown RBP12.43□□□□□ -0.42
SMG6-201ENST00000263073 NUP107P57740 925 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 TROAPQ12815 778 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 PAN2Q504Q3 1202 aaKnown RBP12.43□□□□□ -0.42
SMG6-201ENST00000263073 DGKKQ5KSL6 1271 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 C10orf120Q5SQS8 335 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 BBS7Q8IWZ6 715 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 IGSF9BQ9UPX0 1349 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 TRIM43BA6NCK2 446 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 C2CD2LO14523 706 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 PGM3O95394 542 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 ALOX12P18054 663 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 PTENP60484 403 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 ATG16L2Q8NAA4 619 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 UTP15Q8TED0 518 aaKnown RBP12.43□□□□□ -0.42
SMG6-201ENST00000263073 HASPINQ8TF76 798 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 TMEM39BQ9GZU3 492 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 SAE1Q9UBE0 346 aaPredicted RBP12.43□□□□□ -0.42
SMG6-201ENST00000263073 TRMT6Q9UJA5 497 aaKnown RBP12.43□□□□□ -0.42
SMG6-201ENST00000263073 INPP4BO15327 924 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 DCXO43602 365 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 PROCP04070 461 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 RARAP10276 462 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 GHRP10912 638 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 ADRA1DP25100 572 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 MRPS22P82650 360 aaKnown RBP12.43□□□□□ -0.42
SMG6-201ENST00000263073 RAD51Q06609 339 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 TLK2Q86UE8 772 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 SLC26A11Q86WA9 606 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 KBTBD2Q8IY47 623 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 B3GALNT2Q8NCR0 500 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 TRPC4APQ8TEL6 797 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 OSBPL10Q9BXB5 764 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 DPP3Q9NY33 737 aa12.43□□□□□ -0.42
SMG6-201ENST00000263073 ABI2Q9NYB9 513 aaPredicted RBP12.43□□□□□ -0.42
SMG6-201ENST00000263073 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.43□□□□□ -0.42
SMG6-201ENST00000263073 PDE2AO00408 941 aaPredicted RBP12.42□□□□□ -0.42
SMG6-201ENST00000263073 TBX3O15119 743 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 ZBTB7AO95365 584 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 BCL10O95999 233 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 LTFP02788 710 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 DDI2Q5TDH0 399 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 DNAJC14Q6Y2X3 702 aaPredicted RBP12.42□□□□□ -0.42
SMG6-201ENST00000263073 ZNF677Q86XU0 584 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 ZNF75CPQ92670 426 aaPredicted RBP12.42□□□□□ -0.42
SMG6-201ENST00000263073 CELF6Q96J87 481 aaKnown RBP12.42□□□□□ -0.42
SMG6-201ENST00000263073 PWWP2AQ96N64 755 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 FOPNLQ96NB1 174 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 TLR10Q9BXR5 811 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 DCLK3Q9C098 648 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 CATSPERBQ9H7T0 1116 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 ZSCAN32Q9NX65 697 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 SPATA2Q9UM82 520 aa12.42□□□□□ -0.42
SMG6-201ENST00000263073 PDZK1P1A8MUH7 402 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms