RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 C10orf76Q5T2E6 689 aa12.95□□□□□ -0.34
TRAF4-202ENST00000262396 TCEAL6Q6IPX3 200 aa12.95□□□□□ -0.34
TRAF4-202ENST00000262396 RHBDF2Q6PJF5 856 aa12.95□□□□□ -0.34
TRAF4-202ENST00000262396 INTS8Q75QN2 995 aaKnown RBP12.95□□□□□ -0.34
TRAF4-202ENST00000262396 SV2AQ7L0J3 742 aa12.95□□□□□ -0.34
TRAF4-202ENST00000262396 TADA2BQ86TJ2 420 aa12.95□□□□□ -0.34
TRAF4-202ENST00000262396 UNC93AQ86WB7 457 aa12.95□□□□□ -0.34
TRAF4-202ENST00000262396 SLC9A9Q8IVB4 645 aa12.95□□□□□ -0.34
TRAF4-202ENST00000262396 KIAA0895Q8NCT3 520 aa12.95□□□□□ -0.34
TRAF4-202ENST00000262396 TMC2Q8TDI7 906 aa12.95□□□□□ -0.34
TRAF4-202ENST00000262396 PIGKQ92643 395 aa12.95□□□□□ -0.34
TRAF4-202ENST00000262396 TCEAL3Q969E4 200 aa12.95□□□□□ -0.34
TRAF4-202ENST00000262396 NME7Q9Y5B8 376 aa12.95□□□□□ -0.34
TRAF4-202ENST00000262396 CACNA1AO00555 2505 aa12.95□□□□□ -0.34
TRAF4-202ENST00000262396 DCHS1Q96JQ0 3298 aa12.94□□□□□ -0.34
TRAF4-202ENST00000262396 BCLAF3A2AJT9 711 aaKnown RBP12.94□□□□□ -0.34
TRAF4-202ENST00000262396 GOLGA6L4A6NEF3 574 aa12.94□□□□□ -0.34
TRAF4-202ENST00000262396 NEDD8-MDP1E9PL57 170 aa12.94□□□□□ -0.34
TRAF4-202ENST00000262396 IKBKBO14920 756 aa12.94□□□□□ -0.34
TRAF4-202ENST00000262396 ACTN4O43707 911 aaKnown RBP12.94□□□□□ -0.34
TRAF4-202ENST00000262396 OLFM2O95897 454 aa12.94□□□□□ -0.34
TRAF4-202ENST00000262396 HLA-DRAP01903 254 aa12.94□□□□□ -0.34
TRAF4-202ENST00000262396 ACO1P21399 889 aaKnown RBP12.94□□□□□ -0.34
TRAF4-202ENST00000262396 TUBP50607 506 aa12.94□□□□□ -0.34
TRAF4-202ENST00000262396 ATXN3P54252 364 aaPredicted RBP12.94□□□□□ -0.34
TRAF4-202ENST00000262396 SLC8A3P57103 927 aa12.94□□□□□ -0.34
TRAF4-202ENST00000262396 UAP1L1Q3KQV9 507 aa12.94□□□□□ -0.34
TRAF4-202ENST00000262396 ZACNQ401N2 412 aa12.94□□□□□ -0.34
TRAF4-202ENST00000262396 GRAMD4Q6IC98 578 aa12.94□□□□□ -0.34
TRAF4-202ENST00000262396 SPOPLQ6IQ16 392 aa12.94□□□□□ -0.34
TRAF4-202ENST00000262396 TPGS1Q6ZTW0 290 aa12.94□□□□□ -0.34
TRAF4-202ENST00000262396 ARMCX6Q7L4S7 300 aa12.94□□□□□ -0.34
TRAF4-202ENST00000262396 FAM186BQ8IYM0 893 aa12.94□□□□□ -0.34
TRAF4-202ENST00000262396 FUKQ8N0W3 1084 aa12.94□□□□□ -0.34
TRAF4-202ENST00000262396 ZNF513Q8N8E2 541 aaPredicted RBP12.94□□□□□ -0.34
TRAF4-202ENST00000262396 MDGA1Q8NFP4 955 aa12.94□□□□□ -0.34
TRAF4-202ENST00000262396 PLEKHO2Q8TD55 490 aa12.94□□□□□ -0.34
TRAF4-202ENST00000262396 EZH1Q92800 747 aaPredicted RBP12.94□□□□□ -0.34
TRAF4-202ENST00000262396 NT5C1AQ9BXI3 368 aa12.94□□□□□ -0.34
TRAF4-202ENST00000262396 NUSAP1Q9BXS6 441 aaKnown RBP12.94□□□□□ -0.34
TRAF4-202ENST00000262396 SPHK2Q9NRA0 654 aa12.94□□□□□ -0.34
TRAF4-202ENST00000262396 DNAJC17Q9NVM6 304 aaKnown RBP12.94□□□□□ -0.34
TRAF4-202ENST00000262396 ANGPTL2Q9UKU9 493 aa12.94□□□□□ -0.34
TRAF4-202ENST00000262396 MAPK8IP1Q9UQF2 711 aa12.94□□□□□ -0.34
TRAF4-202ENST00000262396 ATG2BQ96BY7 2078 aa12.93□□□□□ -0.34
TRAF4-202ENST00000262396 SDK1Q7Z5N4 2213 aa12.93□□□□□ -0.34
TRAF4-202ENST00000262396 RALGAPA1Q6GYQ0 2036 aa12.93□□□□□ -0.34
TRAF4-202ENST00000262396 C4orf47A7E2U8 309 aa12.93□□□□□ -0.34
TRAF4-202ENST00000262396 SGK1O00141 431 aa12.93□□□□□ -0.34
TRAF4-202ENST00000262396 KLRC4O43908 158 aa12.93□□□□□ -0.34
TRAF4-202ENST00000262396 VNN1O95497 513 aa12.93□□□□□ -0.34
TRAF4-202ENST00000262396 RALAP11233 206 aa12.93□□□□□ -0.34
TRAF4-202ENST00000262396 PSMC2P35998 433 aaKnown RBP12.93□□□□□ -0.34
TRAF4-202ENST00000262396 WASP42768 502 aa12.93□□□□□ -0.34
TRAF4-202ENST00000262396 GCLMP48507 274 aa12.93□□□□□ -0.34
TRAF4-202ENST00000262396 NOVA1P51513 510 aaKnown RBP12.93□□□□□ -0.34
TRAF4-202ENST00000262396 ADAM9Q13443 819 aa12.93□□□□□ -0.34
TRAF4-202ENST00000262396 PKP1Q13835 747 aa12.93□□□□□ -0.34
TRAF4-202ENST00000262396 PLA2G2CQ5R387 149 aa12.93□□□□□ -0.34
TRAF4-202ENST00000262396 C10orf120Q5SQS8 335 aa12.93□□□□□ -0.34
TRAF4-202ENST00000262396 EMC10Q5UCC4 262 aa12.93□□□□□ -0.34
TRAF4-202ENST00000262396 PMS2CLQ68D20 193 aa12.93□□□□□ -0.34
TRAF4-202ENST00000262396 PSAPL1Q6NUJ1 521 aa12.93□□□□□ -0.34
TRAF4-202ENST00000262396 C12orf40Q86WS4 652 aa12.93□□□□□ -0.34
TRAF4-202ENST00000262396 BBS7Q8IWZ6 715 aa12.93□□□□□ -0.34
TRAF4-202ENST00000262396 C12orf29Q8N999 325 aa12.93□□□□□ -0.34
TRAF4-202ENST00000262396 IL17RCQ8NAC3 791 aa12.93□□□□□ -0.34
TRAF4-202ENST00000262396 RLN3Q8WXF3 142 aa12.93□□□□□ -0.34
TRAF4-202ENST00000262396 CYFIP2Q96F07 1278 aa12.93□□□□□ -0.34
TRAF4-202ENST00000262396 SMOQ99835 787 aa12.93□□□□□ -0.34
TRAF4-202ENST00000262396 BBS2Q9BXC9 721 aa12.93□□□□□ -0.34
TRAF4-202ENST00000262396 SDCBP2Q9H190 292 aa12.93□□□□□ -0.34
TRAF4-202ENST00000262396 KCTD10Q9H3F6 313 aa12.93□□□□□ -0.34
TRAF4-202ENST00000262396 CYP3A43Q9HB55 503 aa12.93□□□□□ -0.34
TRAF4-202ENST00000262396 ZDHHC4Q9NPG8 344 aa12.93□□□□□ -0.34
TRAF4-202ENST00000262396 TMEM9BQ9NQ34 198 aa12.93□□□□□ -0.34
TRAF4-202ENST00000262396 RXFP3Q9NSD7 469 aa12.93□□□□□ -0.34
TRAF4-202ENST00000262396 TMEM30AQ9NV96 361 aa12.93□□□□□ -0.34
TRAF4-202ENST00000262396 DMAC2Q9NW81 257 aa12.93□□□□□ -0.34
TRAF4-202ENST00000262396 WDR35Q9P2L0 1181 aa12.93□□□□□ -0.34
TRAF4-202ENST00000262396 NAGPAQ9UK23 515 aa12.93□□□□□ -0.34
TRAF4-202ENST00000262396 DENND4CQ5VZ89 1909 aa12.92□□□□□ -0.34
TRAF4-202ENST00000262396 NCOR2Q9Y618 2525 aa12.92□□□□□ -0.34
TRAF4-202ENST00000262396 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.92□□□□□ -0.34
TRAF4-202ENST00000262396 STX10O60499 249 aa12.92□□□□□ -0.34
TRAF4-202ENST00000262396 TULP3O75386 442 aa12.92□□□□□ -0.34
TRAF4-202ENST00000262396 ASS1P00966 412 aaKnown RBP12.92□□□□□ -0.34
TRAF4-202ENST00000262396 TRIM49P0CI25 452 aa12.92□□□□□ -0.34
TRAF4-202ENST00000262396 TRIM49CP0CI26 452 aa12.92□□□□□ -0.34
TRAF4-202ENST00000262396 RARGP13631 454 aa12.92□□□□□ -0.34
TRAF4-202ENST00000262396 HOXB2P14652 356 aa12.92□□□□□ -0.34
TRAF4-202ENST00000262396 DPP6P42658 865 aa12.92□□□□□ -0.34
TRAF4-202ENST00000262396 CLDN10P78369 228 aa12.92□□□□□ -0.34
TRAF4-202ENST00000262396 LMAN2Q12907 356 aa12.92□□□□□ -0.34
TRAF4-202ENST00000262396 ST3GAL2Q16842 350 aa12.92□□□□□ -0.34
TRAF4-202ENST00000262396 ZNF394Q53GI3 561 aa12.92□□□□□ -0.34
TRAF4-202ENST00000262396 TCERG1LQ5VWI1 586 aa12.92□□□□□ -0.34
TRAF4-202ENST00000262396 TMEM92Q6UXU6 159 aa12.92□□□□□ -0.34
TRAF4-202ENST00000262396 RSRC2Q7L4I2 434 aaKnown RBP12.92□□□□□ -0.34
TRAF4-202ENST00000262396 RASSF3Q86WH2 238 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms