RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 ARFIP2P53365 341 aa17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 YWHAZP63104 245 aaKnown RBP17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 BMPR2Q13873 1038 aa17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 KRT81Q14533 505 aa17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 TAF11Q15544 211 aa17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 SLC10A6Q3KNW5 377 aa17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 WDR78Q5VTH9 848 aa17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 CCDC110Q8TBZ0 833 aa17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 STK32AQ8WU08 396 aa17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 ALKBH8Q96BT7 664 aaKnown RBP17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 APOPT1Q96IL0 206 aa17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 FDXACB1Q9BRP7 624 aaPredicted RBP17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 CADM1Q9BY67 442 aaKnown RBP17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 CXCL16Q9H2A7 254 aa17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 PLAC1Q9HBJ0 212 aa17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 TXNRD2Q9NNW7 524 aa17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 ARMCX1Q9P291 453 aa17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 NR2E3Q9Y5X4 410 aa17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 WDR90Q96KV7 1748 aa17.03■□□□□ 0.32
TM9SF1-201ENST00000261789 FAM237BA0A1B0GVD1 139 aa17.03■□□□□ 0.32
TM9SF1-201ENST00000261789 TRIM49D1C9J1S8 452 aa17.03■□□□□ 0.32
TM9SF1-201ENST00000261789 LGR5O75473 907 aa17.03■□□□□ 0.32
TM9SF1-201ENST00000261789 ENDOD1O94919 500 aa17.03■□□□□ 0.32
TM9SF1-201ENST00000261789 DHRS4L1P0CG22 281 aa17.03■□□□□ 0.32
TM9SF1-201ENST00000261789 RASSF2P50749 326 aa17.03■□□□□ 0.32
TM9SF1-201ENST00000261789 ZBTB16Q05516 673 aa17.03■□□□□ 0.32
TM9SF1-201ENST00000261789 CRYMQ14894 314 aa17.03■□□□□ 0.32
TM9SF1-201ENST00000261789 PRKD1Q15139 912 aaPredicted RBP17.03■□□□□ 0.32
TM9SF1-201ENST00000261789 Q3C1V9 767 aa17.03■□□□□ 0.32
TM9SF1-201ENST00000261789 DSTYKQ6XUX3 929 aa17.03■□□□□ 0.32
TM9SF1-201ENST00000261789 MAB21L3Q8N8X9 362 aa17.03■□□□□ 0.32
TM9SF1-201ENST00000261789 RNF157Q96PX1 679 aa17.03■□□□□ 0.32
TM9SF1-201ENST00000261789 CNPY3Q9BT09 278 aa17.03■□□□□ 0.32
TM9SF1-201ENST00000261789 SLC13A1Q9BZW2 595 aa17.03■□□□□ 0.32
TM9SF1-201ENST00000261789 TRIP11Q15643 1979 aa17.03■□□□□ 0.32
TM9SF1-201ENST00000261789 IRF6O14896 467 aa17.03■□□□□ 0.32
TM9SF1-201ENST00000261789 UPP2O95045 317 aa17.03■□□□□ 0.32
TM9SF1-201ENST00000261789 IL18RAPO95256 599 aa17.03■□□□□ 0.32
TM9SF1-201ENST00000261789 VTNP04004 478 aa17.03■□□□□ 0.32
TM9SF1-201ENST00000261789 PFKMP08237 780 aa17.03■□□□□ 0.32
TM9SF1-201ENST00000261789 DLDP09622 509 aaKnown RBP17.03■□□□□ 0.32
TM9SF1-201ENST00000261789 TFE3P19532 575 aaPredicted RBP17.03■□□□□ 0.32
TM9SF1-201ENST00000261789 PCK1P35558 622 aa17.03■□□□□ 0.32
TM9SF1-201ENST00000261789 CCDC14Q49A88 953 aa17.03■□□□□ 0.32
TM9SF1-201ENST00000261789 PPP6R3Q5H9R7 873 aaPredicted RBP17.03■□□□□ 0.32
TM9SF1-201ENST00000261789 NOL9Q5SY16 702 aaKnown RBP17.03■□□□□ 0.32
TM9SF1-201ENST00000261789 SCUBE3Q8IX30 993 aa17.03■□□□□ 0.32
TM9SF1-201ENST00000261789 SRPK1Q96SB4 655 aaKnown RBP17.03■□□□□ 0.32
TM9SF1-201ENST00000261789 LPIN3Q9BQK8 851 aa17.03■□□□□ 0.32
TM9SF1-201ENST00000261789 SMYD2Q9NRG4 433 aa17.03■□□□□ 0.32
TM9SF1-201ENST00000261789 RNF19AQ9NV58 838 aa17.03■□□□□ 0.32
TM9SF1-201ENST00000261789 TTLL3Q9Y4R7 772 aa17.03■□□□□ 0.32
TM9SF1-201ENST00000261789 F5H423 210 aaPredicted RBP17.02■□□□□ 0.32
TM9SF1-201ENST00000261789 TRAFD1O14545 582 aaPredicted RBP17.02■□□□□ 0.32
TM9SF1-201ENST00000261789 CYB561D2O14569 222 aa17.02■□□□□ 0.32
TM9SF1-201ENST00000261789 GAS2O43903 313 aaKnown RBP17.02■□□□□ 0.32
TM9SF1-201ENST00000261789 HAUS5O94927 633 aa17.02■□□□□ 0.32
TM9SF1-201ENST00000261789 C1QAP02745 245 aa17.02■□□□□ 0.32
TM9SF1-201ENST00000261789 SLC8A3P57103 927 aa17.02■□□□□ 0.32
TM9SF1-201ENST00000261789 SESN3P58005 492 aa17.02■□□□□ 0.32
TM9SF1-201ENST00000261789 KHDC1Q4VXA5 237 aaKnown RBP17.02■□□□□ 0.32
TM9SF1-201ENST00000261789 CES4AQ5XG92 561 aa17.02■□□□□ 0.32
TM9SF1-201ENST00000261789 ILDR2Q71H61 639 aa17.02■□□□□ 0.32
TM9SF1-201ENST00000261789 PLPPR4Q7Z2D5 763 aa17.02■□□□□ 0.32
TM9SF1-201ENST00000261789 CAND1Q86VP6 1230 aaKnown RBP17.02■□□□□ 0.32
TM9SF1-201ENST00000261789 PQLC3Q8N755 202 aa17.02■□□□□ 0.32
TM9SF1-201ENST00000261789 B3GNT5Q9BYG0 378 aa17.02■□□□□ 0.32
TM9SF1-201ENST00000261789 ZC3H7BQ9UGR2 993 aaKnown RBP17.02■□□□□ 0.32
TM9SF1-201ENST00000261789 CCDC195A0A1B0GUA6 201 aa17.02■□□□□ 0.31
TM9SF1-201ENST00000261789 TOP3BO95985 862 aaKnown RBP17.02■□□□□ 0.31
TM9SF1-201ENST00000261789 MYL2P10916 166 aa17.02■□□□□ 0.31
TM9SF1-201ENST00000261789 VDRP11473 427 aa17.02■□□□□ 0.31
TM9SF1-201ENST00000261789 ABL2P42684 1182 aa17.02■□□□□ 0.31
TM9SF1-201ENST00000261789 SERPINB4P48594 390 aa17.02■□□□□ 0.31
TM9SF1-201ENST00000261789 SLC18A2Q05940 514 aa17.02■□□□□ 0.31
TM9SF1-201ENST00000261789 PMF1Q6P1K2 205 aa17.02■□□□□ 0.31
TM9SF1-201ENST00000261789 ALYREFQ86V81 257 aaKnown RBP17.02■□□□□ 0.31
TM9SF1-201ENST00000261789 PCDH19Q8TAB3 1148 aa17.02■□□□□ 0.31
TM9SF1-201ENST00000261789 OTUD5Q96G74 571 aa17.02■□□□□ 0.31
TM9SF1-201ENST00000261789 FAM49BQ9NUQ9 324 aa17.02■□□□□ 0.31
TM9SF1-201ENST00000261789 CNMDO75829 334 aa17.01■□□□□ 0.31
TM9SF1-201ENST00000261789 TXNP10599 105 aaKnown RBP17.01■□□□□ 0.31
TM9SF1-201ENST00000261789 CPA2P48052 419 aa17.01■□□□□ 0.31
TM9SF1-201ENST00000261789 ATXN1P54253 815 aaKnown RBP17.01■□□□□ 0.31
TM9SF1-201ENST00000261789 BCAR1P56945 870 aa17.01■□□□□ 0.31
TM9SF1-201ENST00000261789 RINLQ6ZS11 566 aa17.01■□□□□ 0.31
TM9SF1-201ENST00000261789 APBB1IPQ7Z5R6 666 aaPredicted RBP17.01■□□□□ 0.31
TM9SF1-201ENST00000261789 MPP5Q8N3R9 675 aa17.01■□□□□ 0.31
TM9SF1-201ENST00000261789 ZNF398Q8TD17 642 aa17.01■□□□□ 0.31
TM9SF1-201ENST00000261789 FAM172AQ8WUF8 416 aa17.01■□□□□ 0.31
TM9SF1-201ENST00000261789 PTCD3Q96EY7 689 aaKnown RBP17.01■□□□□ 0.31
TM9SF1-201ENST00000261789 PDZD7Q9H5P4 517 aa17.01■□□□□ 0.31
TM9SF1-201ENST00000261789 CNTN3Q9P232 1028 aa17.01■□□□□ 0.31
TM9SF1-201ENST00000261789 LNPEPQ9UIQ6 1025 aa17.01■□□□□ 0.31
TM9SF1-201ENST00000261789 COPEO14579 308 aa17.01■□□□□ 0.31
TM9SF1-201ENST00000261789 CHADO15335 359 aa17.01■□□□□ 0.31
TM9SF1-201ENST00000261789 KITP10721 976 aa17.01■□□□□ 0.31
TM9SF1-201ENST00000261789 ARF4P18085 180 aaPredicted RBP17.01■□□□□ 0.31
TM9SF1-201ENST00000261789 PTDSS1P48651 473 aaKnown RBP17.01■□□□□ 0.31
TM9SF1-201ENST00000261789 CCNG1P51959 295 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms