RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 TUBP50607 506 aa16.82■□□□□ 0.28
SNCAIP-202ENST00000261368 FKBP1CQ5VVH2 108 aa16.82■□□□□ 0.28
SNCAIP-202ENST00000261368 AP1ARQ63HQ0 302 aa16.82■□□□□ 0.28
SNCAIP-202ENST00000261368 SLC30A9Q6PML9 568 aa16.82■□□□□ 0.28
SNCAIP-202ENST00000261368 RGS9BPQ6ZS82 235 aa16.82■□□□□ 0.28
SNCAIP-202ENST00000261368 CDHR3Q6ZTQ4 885 aa16.82■□□□□ 0.28
SNCAIP-202ENST00000261368 SLC26A7Q8TE54 656 aa16.82■□□□□ 0.28
SNCAIP-202ENST00000261368 PPP1R36Q96LQ0 422 aa16.82■□□□□ 0.28
SNCAIP-202ENST00000261368 NDE1Q9NXR1 346 aa16.82■□□□□ 0.28
SNCAIP-202ENST00000261368 CYTH4Q9UIA0 394 aa16.82■□□□□ 0.28
SNCAIP-202ENST00000261368 ANGPTL2Q9UKU9 493 aa16.82■□□□□ 0.28
SNCAIP-202ENST00000261368 FARP1Q9Y4F1 1045 aaPredicted RBP16.82■□□□□ 0.28
SNCAIP-202ENST00000261368 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.82■□□□□ 0.28
SNCAIP-202ENST00000261368 EME2A4GXA9 379 aaPredicted RBP16.82■□□□□ 0.28
SNCAIP-202ENST00000261368 CXorf49A8MYA2 514 aaPredicted RBP16.82■□□□□ 0.28
SNCAIP-202ENST00000261368 APOL1O14791 398 aa16.82■□□□□ 0.28
SNCAIP-202ENST00000261368 CLGNO14967 610 aa16.82■□□□□ 0.28
SNCAIP-202ENST00000261368 USP1O94782 785 aa16.82■□□□□ 0.28
SNCAIP-202ENST00000261368 STIP1P31948 543 aaKnown RBP16.82■□□□□ 0.28
SNCAIP-202ENST00000261368 ISLR2Q6UXK2 745 aa16.82■□□□□ 0.28
SNCAIP-202ENST00000261368 TMEM174Q8WUU8 243 aa16.82■□□□□ 0.28
SNCAIP-202ENST00000261368 SYT15Q9BQS2 421 aa16.82■□□□□ 0.28
SNCAIP-202ENST00000261368 TRIM4Q9C037 500 aa16.82■□□□□ 0.28
SNCAIP-202ENST00000261368 PPP1R12AO14974 1030 aaPredicted RBP16.81■□□□□ 0.28
SNCAIP-202ENST00000261368 NFICP08651 508 aa16.81■□□□□ 0.28
SNCAIP-202ENST00000261368 ARL2P36404 184 aa16.81■□□□□ 0.28
SNCAIP-202ENST00000261368 RPL10AP62906 217 aaKnown RBP16.81■□□□□ 0.28
SNCAIP-202ENST00000261368 UBAP2LQ14157 1087 aaKnown RBP16.81■□□□□ 0.28
SNCAIP-202ENST00000261368 SCUBE1Q8IWY4 988 aa16.81■□□□□ 0.28
SNCAIP-202ENST00000261368 TRIM42Q8IWZ5 723 aa16.81■□□□□ 0.28
SNCAIP-202ENST00000261368 EFCAB3Q8N7B9 438 aa16.81■□□□□ 0.28
SNCAIP-202ENST00000261368 DNAJC5Q9H3Z4 198 aa16.81■□□□□ 0.28
SNCAIP-202ENST00000261368 AKT3Q9Y243 479 aa16.81■□□□□ 0.28
SNCAIP-202ENST00000261368 A6NJR5 290 aa16.81■□□□□ 0.28
SNCAIP-202ENST00000261368 E5RJQ4 531 aa16.81■□□□□ 0.28
SNCAIP-202ENST00000261368 LINGO3P0C6S8 592 aa16.81■□□□□ 0.28
SNCAIP-202ENST00000261368 SDC4P31431 198 aa16.81■□□□□ 0.28
SNCAIP-202ENST00000261368 PSEN1P49768 467 aa16.81■□□□□ 0.28
SNCAIP-202ENST00000261368 SLC25A11Q02978 314 aaKnown RBP16.81■□□□□ 0.28
SNCAIP-202ENST00000261368 SURF1Q15526 300 aa16.81■□□□□ 0.28
SNCAIP-202ENST00000261368 IZUMO2Q6UXV1 221 aa16.81■□□□□ 0.28
SNCAIP-202ENST00000261368 GADL1Q6ZQY3 521 aa16.81■□□□□ 0.28
SNCAIP-202ENST00000261368 CCNYQ8ND76 341 aa16.81■□□□□ 0.28
SNCAIP-202ENST00000261368 SLC44A1Q8WWI5 657 aa16.81■□□□□ 0.28
SNCAIP-202ENST00000261368 SEPT1Q8WYJ6 367 aa16.81■□□□□ 0.28
SNCAIP-202ENST00000261368 TWNKQ96RR1 684 aa16.81■□□□□ 0.28
SNCAIP-202ENST00000261368 PDLIM7Q9NR12 457 aa16.81■□□□□ 0.28
SNCAIP-202ENST00000261368 PAK5Q9P286 719 aa16.81■□□□□ 0.28
SNCAIP-202ENST00000261368 CPSF2Q9P2I0 782 aaKnown RBP16.81■□□□□ 0.28
SNCAIP-202ENST00000261368 EN1Q05925 392 aaPredicted RBP16.81■□□□□ 0.28
SNCAIP-202ENST00000261368 POLNQ7Z5Q5 900 aa16.81■□□□□ 0.28
SNCAIP-202ENST00000261368 ARFGAP1Q8N6T3 406 aa16.81■□□□□ 0.28
SNCAIP-202ENST00000261368 KANSL3Q9P2N6 904 aa16.81■□□□□ 0.28
SNCAIP-202ENST00000261368 CCDC160A6NGH7 325 aa16.8■□□□□ 0.28
SNCAIP-202ENST00000261368 TRUB2O95900 331 aaKnown RBP16.8■□□□□ 0.28
SNCAIP-202ENST00000261368 P4HA1P13674 534 aa16.8■□□□□ 0.28
SNCAIP-202ENST00000261368 KCNA4P22459 653 aa16.8■□□□□ 0.28
SNCAIP-202ENST00000261368 XYLT1Q86Y38 959 aa16.8■□□□□ 0.28
SNCAIP-202ENST00000261368 WDR75Q8IWA0 830 aaKnown RBP16.8■□□□□ 0.28
SNCAIP-202ENST00000261368 C12orf29Q8N999 325 aa16.8■□□□□ 0.28
SNCAIP-202ENST00000261368 IFT122Q9HBG6 1241 aa16.8■□□□□ 0.28
SNCAIP-202ENST00000261368 WDR35Q9P2L0 1181 aa16.8■□□□□ 0.28
SNCAIP-202ENST00000261368 ZNF214Q9UL59 606 aaPredicted RBP16.8■□□□□ 0.28
SNCAIP-202ENST00000261368 LRRC42Q9Y546 428 aa16.8■□□□□ 0.28
SNCAIP-202ENST00000261368 ZNF831Q5JPB2 1677 aa16.8■□□□□ 0.28
SNCAIP-202ENST00000261368 E7ENQ6 273 aa16.8■□□□□ 0.28
SNCAIP-202ENST00000261368 CACNA2D1P54289 1103 aa16.8■□□□□ 0.28
SNCAIP-202ENST00000261368 NME8Q8N427 588 aa16.8■□□□□ 0.28
SNCAIP-202ENST00000261368 RBM15BQ8NDT2 890 aaKnown RBP16.8■□□□□ 0.28
SNCAIP-202ENST00000261368 PPP4R1Q8TF05 950 aa16.8■□□□□ 0.28
SNCAIP-202ENST00000261368 FAM149B1Q96BN6 582 aa16.8■□□□□ 0.28
SNCAIP-202ENST00000261368 ACO2Q99798 780 aaKnown RBP16.8■□□□□ 0.28
SNCAIP-202ENST00000261368 HOXC10Q9NYD6 342 aa16.8■□□□□ 0.28
SNCAIP-202ENST00000261368 LRCH1Q9Y2L9 728 aa16.8■□□□□ 0.28
SNCAIP-202ENST00000261368 ONECUT3O60422 494 aaPredicted RBP16.8■□□□□ 0.28
SNCAIP-202ENST00000261368 LGR5O75473 907 aa16.8■□□□□ 0.28
SNCAIP-202ENST00000261368 LYPLA1O75608 230 aaPredicted RBP16.8■□□□□ 0.28
SNCAIP-202ENST00000261368 AMHR2Q16671 573 aa16.8■□□□□ 0.28
SNCAIP-202ENST00000261368 TRMT10BQ6PF06 316 aaKnown RBP16.8■□□□□ 0.28
SNCAIP-202ENST00000261368 FBXO27Q8NI29 283 aa16.8■□□□□ 0.28
SNCAIP-202ENST00000261368 FAM172AQ8WUF8 416 aa16.8■□□□□ 0.28
SNCAIP-202ENST00000261368 CPB2Q96IY4 423 aa16.8■□□□□ 0.28
SNCAIP-202ENST00000261368 CLMNQ96JQ2 1002 aa16.8■□□□□ 0.28
SNCAIP-202ENST00000261368 WDR83Q9BRX9 315 aaKnown RBP16.8■□□□□ 0.28
SNCAIP-202ENST00000261368 UBR3Q6ZT12 1888 aa16.79■□□□□ 0.28
SNCAIP-202ENST00000261368 PGK2P07205 417 aa16.79■□□□□ 0.28
SNCAIP-202ENST00000261368 BIRC2Q13490 618 aa16.79■□□□□ 0.28
SNCAIP-202ENST00000261368 SCUBE3Q8IX30 993 aa16.79■□□□□ 0.28
SNCAIP-202ENST00000261368 ZNF398Q8TD17 642 aa16.79■□□□□ 0.28
SNCAIP-202ENST00000261368 ATP2A3Q93084 1043 aa16.79■□□□□ 0.28
SNCAIP-202ENST00000261368 PAPOLBQ9NRJ5 636 aaKnown RBP16.79■□□□□ 0.28
SNCAIP-202ENST00000261368 SLC17A6Q9P2U8 582 aa16.79■□□□□ 0.28
SNCAIP-202ENST00000261368 PRR5-ARHGAP8B1AHC4 643 aa16.79■□□□□ 0.28
SNCAIP-202ENST00000261368 PDE5AO76074 875 aa16.79■□□□□ 0.28
SNCAIP-202ENST00000261368 CLDN10P78369 228 aa16.79■□□□□ 0.28
SNCAIP-202ENST00000261368 ARHGAP8P85298 464 aa16.79■□□□□ 0.28
SNCAIP-202ENST00000261368 SLC25A3Q00325 362 aa16.79■□□□□ 0.28
SNCAIP-202ENST00000261368 MPZL3Q6UWV2 235 aa16.79■□□□□ 0.28
SNCAIP-202ENST00000261368 ZPBP2Q6X784 338 aa16.79■□□□□ 0.28
SNCAIP-202ENST00000261368 TMEM176AQ96HP8 235 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms