RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 FAM192AQ9GZU8 254 aa16.54■□□□□ 0.24
LMNB1-201ENST00000261366 ZNF277Q9NRM2 450 aaPredicted RBP16.54■□□□□ 0.24
LMNB1-201ENST00000261366 DDX56Q9NY93 547 aaKnown RBP16.54■□□□□ 0.24
LMNB1-201ENST00000261366 KCNK4Q9NYG8 393 aa16.54■□□□□ 0.24
LMNB1-201ENST00000261366 ZC3H7BQ9UGR2 993 aaKnown RBP16.54■□□□□ 0.24
LMNB1-201ENST00000261366 ADAMTS6Q9UKP5 1117 aa16.54■□□□□ 0.24
LMNB1-201ENST00000261366 PCDHA10Q9Y5I2 948 aa16.54■□□□□ 0.24
LMNB1-201ENST00000261366 TTLL13PA6NNM8 815 aa16.54■□□□□ 0.24
LMNB1-201ENST00000261366 LYPLA2O95372 231 aa16.54■□□□□ 0.24
LMNB1-201ENST00000261366 PROCP04070 461 aa16.54■□□□□ 0.24
LMNB1-201ENST00000261366 RAP1GAPP47736 663 aa16.54■□□□□ 0.24
LMNB1-201ENST00000261366 SLC18A2Q05940 514 aa16.54■□□□□ 0.24
LMNB1-201ENST00000261366 DYNC1I2Q13409 638 aaKnown RBP16.54■□□□□ 0.24
LMNB1-201ENST00000261366 MED21Q13503 144 aa16.54■□□□□ 0.24
LMNB1-201ENST00000261366 TRMT10BQ6PF06 316 aaKnown RBP16.54■□□□□ 0.24
LMNB1-201ENST00000261366 MARK2Q7KZI7 788 aaKnown RBP16.54■□□□□ 0.24
LMNB1-201ENST00000261366 SLC26A11Q86WA9 606 aa16.54■□□□□ 0.24
LMNB1-201ENST00000261366 SAMD3Q8N6K7 520 aa16.54■□□□□ 0.24
LMNB1-201ENST00000261366 DRAXINQ8NBI3 349 aaPredicted RBP16.54■□□□□ 0.24
LMNB1-201ENST00000261366 SMYD2Q9NRG4 433 aa16.54■□□□□ 0.24
LMNB1-201ENST00000261366 ANKEF1Q9NU02 776 aa16.54■□□□□ 0.24
LMNB1-201ENST00000261366 STK32BQ9NY57 414 aa16.54■□□□□ 0.24
LMNB1-201ENST00000261366 TMOD2Q9NZR1 351 aa16.54■□□□□ 0.24
LMNB1-201ENST00000261366 PLLPQ9Y342 182 aa16.54■□□□□ 0.24
LMNB1-201ENST00000261366 NFASCO94856 1347 aa16.54■□□□□ 0.24
LMNB1-201ENST00000261366 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.53■□□□□ 0.24
LMNB1-201ENST00000261366 GRAP2O75791 330 aa16.53■□□□□ 0.24
LMNB1-201ENST00000261366 EDN1P05305 212 aa16.53■□□□□ 0.24
LMNB1-201ENST00000261366 ATXN3P54252 364 aaPredicted RBP16.53■□□□□ 0.24
LMNB1-201ENST00000261366 PSMC1P62191 440 aaKnown RBP16.53■□□□□ 0.24
LMNB1-201ENST00000261366 VWA5B1Q5TIE3 1220 aa16.53■□□□□ 0.24
LMNB1-201ENST00000261366 SH2D5Q6ZV89 423 aa16.53■□□□□ 0.24
LMNB1-201ENST00000261366 ZNF526Q8TF50 670 aaPredicted RBP16.53■□□□□ 0.24
LMNB1-201ENST00000261366 PPP2R3CQ969Q6 453 aa16.53■□□□□ 0.24
LMNB1-201ENST00000261366 CISHQ9NSE2 258 aa16.53■□□□□ 0.24
LMNB1-201ENST00000261366 CTDP1Q9Y5B0 961 aaPredicted RBP16.53■□□□□ 0.24
LMNB1-201ENST00000261366 QSER1Q2KHR3 1735 aa16.53■□□□□ 0.24
LMNB1-201ENST00000261366 A0A088AWK7 358 aa16.53■□□□□ 0.24
LMNB1-201ENST00000261366 E7ESA3 106 aa16.53■□□□□ 0.24
LMNB1-201ENST00000261366 KRT37O76014 449 aa16.53■□□□□ 0.24
LMNB1-201ENST00000261366 KCNA4P22459 653 aa16.53■□□□□ 0.24
LMNB1-201ENST00000261366 JAK3P52333 1124 aa16.53■□□□□ 0.24
LMNB1-201ENST00000261366 RPL10AP62906 217 aaKnown RBP16.53■□□□□ 0.24
LMNB1-201ENST00000261366 PRKCEQ02156 737 aa16.53■□□□□ 0.24
LMNB1-201ENST00000261366 DEUP1Q05D60 604 aa16.53■□□□□ 0.24
LMNB1-201ENST00000261366 MMEL1Q495T6 779 aa16.53■□□□□ 0.24
LMNB1-201ENST00000261366 PTPN20Q4JDL3 420 aa16.53■□□□□ 0.24
LMNB1-201ENST00000261366 TTC39BQ5VTQ0 682 aaPredicted RBP16.53■□□□□ 0.24
LMNB1-201ENST00000261366 CDR2LQ86X02 465 aaPredicted RBP16.53■□□□□ 0.24
LMNB1-201ENST00000261366 CCDC60Q8IWA6 550 aaPredicted RBP16.53■□□□□ 0.24
LMNB1-201ENST00000261366 UNC5BQ8IZJ1 945 aa16.53■□□□□ 0.24
LMNB1-201ENST00000261366 AGR3Q8TD06 166 aa16.53■□□□□ 0.24
LMNB1-201ENST00000261366 GDPD5Q8WTR4 605 aa16.53■□□□□ 0.24
LMNB1-201ENST00000261366 OPTNQ96CV9 577 aa16.53■□□□□ 0.24
LMNB1-201ENST00000261366 GCNAQ96QF7 691 aa16.53■□□□□ 0.24
LMNB1-201ENST00000261366 VCX3BQ9H321 246 aa16.53■□□□□ 0.24
LMNB1-201ENST00000261366 VCX3AQ9NNX9 186 aa16.53■□□□□ 0.24
LMNB1-201ENST00000261366 MYOCOSA0A1B0GUC4 107 aa16.52■□□□□ 0.24
LMNB1-201ENST00000261366 F8W8V4 182 aa16.52■□□□□ 0.24
LMNB1-201ENST00000261366 K7ERI5 159 aa16.52■□□□□ 0.24
LMNB1-201ENST00000261366 ITM2AO43736 263 aa16.52■□□□□ 0.24
LMNB1-201ENST00000261366 CSH1P0DML2 217 aa16.52■□□□□ 0.24
LMNB1-201ENST00000261366 CSH2P0DML3 217 aa16.52■□□□□ 0.24
LMNB1-201ENST00000261366 CRABP2P29373 138 aa16.52■□□□□ 0.24
LMNB1-201ENST00000261366 SLC25A11Q02978 314 aaKnown RBP16.52■□□□□ 0.24
LMNB1-201ENST00000261366 RABGAP1LQ5R372 815 aa16.52■□□□□ 0.24
LMNB1-201ENST00000261366 ATG16L1Q676U5 607 aa16.52■□□□□ 0.24
LMNB1-201ENST00000261366 FAM160B2Q86V87 743 aa16.52■□□□□ 0.24
LMNB1-201ENST00000261366 FAM81AQ8TBF8 368 aa16.52■□□□□ 0.24
LMNB1-201ENST00000261366 FEM1BQ9UK73 627 aa16.52■□□□□ 0.24
LMNB1-201ENST00000261366 HBS1LQ9Y450 684 aaKnown RBP16.52■□□□□ 0.24
LMNB1-201ENST00000261366 KCNN4O15554 427 aa16.52■□□□□ 0.24
LMNB1-201ENST00000261366 BUD23O43709 281 aaKnown RBP16.52■□□□□ 0.24
LMNB1-201ENST00000261366 ENTPD3O75355 529 aa16.52■□□□□ 0.24
LMNB1-201ENST00000261366 SNRPAP09012 282 aaKnown RBP16.52■□□□□ 0.24
LMNB1-201ENST00000261366 NCF2P19878 526 aaPredicted RBP16.52■□□□□ 0.24
LMNB1-201ENST00000261366 ROR1Q01973 937 aa16.52■□□□□ 0.24
LMNB1-201ENST00000261366 DNAL1Q4LDG9 190 aa16.52■□□□□ 0.24
LMNB1-201ENST00000261366 EFHC1Q5JVL4 640 aa16.52■□□□□ 0.24
LMNB1-201ENST00000261366 LRRC38Q5VT99 294 aa16.52■□□□□ 0.24
LMNB1-201ENST00000261366 BBS12Q6ZW61 710 aa16.52■□□□□ 0.24
LMNB1-201ENST00000261366 DHDDSQ86SQ9 333 aa16.52■□□□□ 0.24
LMNB1-201ENST00000261366 SPATA24Q86W54 205 aa16.52■□□□□ 0.24
LMNB1-201ENST00000261366 HPS6Q86YV9 775 aa16.52■□□□□ 0.24
LMNB1-201ENST00000261366 DEPTORQ8TB45 409 aa16.52■□□□□ 0.24
LMNB1-201ENST00000261366 PDCD2LQ9BRP1 358 aa16.52■□□□□ 0.24
LMNB1-201ENST00000261366 CCDC106Q9BWC9 280 aa16.52■□□□□ 0.24
LMNB1-201ENST00000261366 S100A14Q9HCY8 104 aa16.52■□□□□ 0.24
LMNB1-201ENST00000261366 GPATCH2LQ9NWQ4 482 aa16.52■□□□□ 0.24
LMNB1-201ENST00000261366 DDX43Q9NXZ2 648 aaKnown RBP16.52■□□□□ 0.24
LMNB1-201ENST00000261366 CYTH4Q9UIA0 394 aa16.52■□□□□ 0.24
LMNB1-201ENST00000261366 DNAJC16Q9Y2G8 782 aa16.52■□□□□ 0.24
LMNB1-201ENST00000261366 TEX264Q9Y6I9 313 aa16.52■□□□□ 0.24
LMNB1-201ENST00000261366 STIP1P31948 543 aaKnown RBP16.52■□□□□ 0.23
LMNB1-201ENST00000261366 MSX2P35548 267 aaPredicted RBP16.52■□□□□ 0.23
LMNB1-201ENST00000261366 SCNN1BP51168 640 aa16.52■□□□□ 0.23
LMNB1-201ENST00000261366 TFAMQ00059 246 aaKnown RBP16.52■□□□□ 0.23
LMNB1-201ENST00000261366 KRT76Q01546 638 aa16.52■□□□□ 0.23
LMNB1-201ENST00000261366 STX3Q13277 289 aa16.52■□□□□ 0.23
LMNB1-201ENST00000261366 HADHQ16836 314 aaKnown RBP16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms