RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 PLEKP08567 350 aaPredicted RBP8.02□□□□□ -1.13
GPNMB-201ENST00000258733 HOXB3P14651 431 aaPredicted RBP8.02□□□□□ -1.13
GPNMB-201ENST00000258733 NPR1P16066 1061 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 IARSP41252 1262 aaKnown RBP8.02□□□□□ -1.13
GPNMB-201ENST00000258733 PIP4K2AP48426 406 aaPredicted RBP8.02□□□□□ -1.13
GPNMB-201ENST00000258733 RAP1GDS1P52306 607 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 PPARDQ03181 441 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 GRM2Q14416 872 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 POU6F1Q14863 301 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 CYP2A13Q16696 494 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 ACAD11Q709F0 780 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 TRAPPC11Q7Z392 1133 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 AGGF1Q8N302 714 aaeCLIP8.02□□□□□ -1.13
GPNMB-201ENST00000258733 ZFP28Q8NHY6 868 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 TANKQ92844 425 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 PLEKHA8Q96JA3 519 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 SLC29A1Q99808 456 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 ELAC2Q9BQ52 826 aaKnown RBP8.02□□□□□ -1.13
GPNMB-201ENST00000258733 TRIM55Q9BYV6 548 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 CD209Q9NNX6 404 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 SNX6Q9UNH7 406 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 ZNF518AQ6AHZ1 1483 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 UMODL1Q5DID0 1318 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 DYNC1LI2O43237 492 aaPredicted RBP8.02□□□□□ -1.13
GPNMB-201ENST00000258733 ZNF862O60290 1169 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 ENTPD5O75356 428 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 PRKAR1AP10644 381 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 CSF2RAP15509 400 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 CASP1P29466 404 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 CAPZA2P47755 286 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 MAN2A2P49641 1150 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 SLC34A1Q06495 639 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 RAD51Q06609 339 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 SELENBP1Q13228 472 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 C5orf22Q49AR2 442 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 ERMARDQ5T6L9 678 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 PRPF38BQ5VTL8 546 aaKnown RBP8.02□□□□□ -1.13
GPNMB-201ENST00000258733 PPP1R18Q6NYC8 613 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 CAMK1DQ8IU85 385 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 FAM109AQ8N4B1 249 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 KBTBD7Q8WVZ9 684 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 SEPT8Q92599 483 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 DEPDC7Q96QD5 511 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 BCL7BQ9BQE9 202 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 PABPC3Q9H361 631 aaKnown RBP8.02□□□□□ -1.13
GPNMB-201ENST00000258733 SMYD3Q9H7B4 428 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 MBD1Q9UIS9 605 aaPredicted RBP8.02□□□□□ -1.13
GPNMB-201ENST00000258733 MAN2B2Q9Y2E5 1009 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 ADGRG1Q9Y653 693 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 AK5Q9Y6K8 562 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 ANKRD26Q9UPS8 1709 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 ERVK-7P63135 1459 aa8.02□□□□□ -1.13
GPNMB-201ENST00000258733 CDK12Q9NYV4 1490 aaPredicted RBP8.02□□□□□ -1.13
GPNMB-201ENST00000258733 ABCC12Q96J65 1359 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 A0A1B0GTQ1 180 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 GSTTP1A0A1W2PQM5 241 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 LINC00587B1AMM8 73 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 JRKO75564 520 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 PGM3O95394 542 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 CLPTM1O96005 669 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 AFPP02771 609 aaKnown RBP8.01□□□□□ -1.13
GPNMB-201ENST00000258733 PDE6AP16499 860 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 TTKP33981 857 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 BMPR1AP36894 532 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 IL1RL1Q01638 556 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 ZBTB16Q05516 673 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 CACNB2Q08289 660 aaPredicted RBP8.01□□□□□ -1.13
GPNMB-201ENST00000258733 CUL2Q13617 745 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 GIT2Q14161 759 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 DOC2AQ14183 400 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 ZNF829Q3KNS6 432 aaPredicted RBP8.01□□□□□ -1.13
GPNMB-201ENST00000258733 POTEHQ6S545 545 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 PLEKHM3Q6ZWE6 761 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 KBTBD2Q8IY47 623 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 NCOA7Q8NI08 942 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 VANGL1Q8TAA9 524 aaPredicted RBP8.01□□□□□ -1.13
GPNMB-201ENST00000258733 EMILIN2Q9BXX0 1053 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 HOXD1Q9GZZ0 328 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 NCOA5Q9HCD5 579 aaKnown RBP8.01□□□□□ -1.13
GPNMB-201ENST00000258733 GGT7Q9UJ14 662 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.01□□□□□ -1.13
GPNMB-201ENST00000258733 GMPPBQ9Y5P6 360 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 ADGRB2O60241 1585 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 A0A087WWV3 80 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 PCDH17O14917 1159 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 CTNND1O60716 968 aaKnown RBP8.01□□□□□ -1.13
GPNMB-201ENST00000258733 SULT1C4O75897 302 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 CIAO1O76071 339 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 MYO1DO94832 1006 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 UNC5CO95185 931 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 POLR3DP05423 398 aaPredicted RBP8.01□□□□□ -1.13
GPNMB-201ENST00000258733 RB1P06400 928 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 CHRM5P08912 532 aaPredicted RBP8.01□□□□□ -1.13
GPNMB-201ENST00000258733 TCP1P17987 556 aaKnown RBP8.01□□□□□ -1.13
GPNMB-201ENST00000258733 ADH7P40394 386 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 NPTX2P47972 431 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 C21orf59P57076 290 aa8.01□□□□□ -1.13
GPNMB-201ENST00000258733 SF3A3Q12874 501 aaKnown RBP eCLIP8.01□□□□□ -1.13
GPNMB-201ENST00000258733 IFIT5Q13325 482 aaKnown RBP8.01□□□□□ -1.13
GPNMB-201ENST00000258733 PLA2G4EQ3MJ16 856 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms