RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 PNPOQ9NVS9 261 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 NARFQ9UHQ1 456 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 TMCO1Q9UM00 188 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 ASB3Q9Y575 518 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 AP4B1Q9Y6B7 739 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 A0A0B4J269 797 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 ARHGEF37A1IGU5 675 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 E5RJQ4 531 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 UGT1A9O60656 530 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 FAM58BPP0C7Q3 252 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 MMRN1Q13201 1228 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 CIAPIN1Q6FI81 312 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 RHBDF2Q6PJF5 856 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 RNF135Q8IUD6 432 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 TNS4Q8IZW8 715 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 ZNF606Q8WXB4 792 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 FAM149B1Q96BN6 582 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 ZBTB45Q96K62 511 aaPredicted RBP12.78□□□□□ -0.36
USP30-201ENST00000257548 SLITRK1Q96PX8 696 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 UGT1A7Q9HAW7 530 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 UGT1A10Q9HAW8 530 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 UGT1A8Q9HAW9 530 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 RABGEF1Q9UJ41 708 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 CASZ1Q86V15 1759 aa12.78□□□□□ -0.36
USP30-201ENST00000257548 P4HA2O15460 535 aa12.77□□□□□ -0.36
USP30-201ENST00000257548 STRNO43815 780 aa12.77□□□□□ -0.36
USP30-201ENST00000257548 F7P08709 466 aaPredicted RBP12.77□□□□□ -0.36
USP30-201ENST00000257548 MLH1P40692 756 aa12.77□□□□□ -0.36
USP30-201ENST00000257548 NADK2Q4G0N4 442 aa12.77□□□□□ -0.36
USP30-201ENST00000257548 SPDYAQ5MJ70 313 aa12.77□□□□□ -0.36
USP30-201ENST00000257548 LRRC8EQ6NSJ5 796 aa12.77□□□□□ -0.36
USP30-201ENST00000257548 PPP1R2P3Q6NXS1 205 aa12.77□□□□□ -0.36
USP30-201ENST00000257548 FOXR2Q6PJQ5 311 aa12.77□□□□□ -0.36
USP30-201ENST00000257548 TTLL6Q8N841 843 aa12.77□□□□□ -0.36
USP30-201ENST00000257548 RMDN3Q96TC7 470 aa12.77□□□□□ -0.36
USP30-201ENST00000257548 PFDN4Q9NQP4 134 aa12.77□□□□□ -0.36
USP30-201ENST00000257548 KCNK4Q9NYG8 393 aa12.77□□□□□ -0.36
USP30-201ENST00000257548 GTSE1Q9NYZ3 720 aa12.77□□□□□ -0.36
USP30-201ENST00000257548 CENPFP49454 3210 aa12.77□□□□□ -0.36
USP30-201ENST00000257548 POLRMTO00411 1230 aaKnown RBP12.77□□□□□ -0.37
USP30-201ENST00000257548 ATP9BO43861 1147 aa12.77□□□□□ -0.37
USP30-201ENST00000257548 ABHD2P08910 425 aa12.77□□□□□ -0.37
USP30-201ENST00000257548 TFPTP0C1Z6 253 aa12.77□□□□□ -0.37
USP30-201ENST00000257548 TM4SF1P30408 202 aa12.77□□□□□ -0.37
USP30-201ENST00000257548 ACTR3P61158 418 aa12.77□□□□□ -0.37
USP30-201ENST00000257548 CBX3Q13185 183 aa12.77□□□□□ -0.37
USP30-201ENST00000257548 CUL2Q13617 745 aa12.77□□□□□ -0.37
USP30-201ENST00000257548 BMT2Q1RMZ1 405 aa12.77□□□□□ -0.37
USP30-201ENST00000257548 PLEKHO2Q8TD55 490 aa12.77□□□□□ -0.37
USP30-201ENST00000257548 GIPC3Q8TF64 312 aa12.77□□□□□ -0.37
USP30-201ENST00000257548 TMEM79Q9BSE2 394 aa12.77□□□□□ -0.37
USP30-201ENST00000257548 HAUS8Q9BT25 410 aa12.77□□□□□ -0.37
USP30-201ENST00000257548 BOLA2-SMG1P6H3BVE0 249 aa12.77□□□□□ -0.37
USP30-201ENST00000257548 INO80B-WBP1J3KQ70 363 aa12.77□□□□□ -0.37
USP30-201ENST00000257548 ADCY6O43306 1168 aa12.77□□□□□ -0.37
USP30-201ENST00000257548 SERPINB2P05120 415 aa12.77□□□□□ -0.37
USP30-201ENST00000257548 SPATA31D3P0C874 917 aa12.77□□□□□ -0.37
USP30-201ENST00000257548 SLC1A6P48664 564 aa12.77□□□□□ -0.37
USP30-201ENST00000257548 GPX6P59796 221 aa12.77□□□□□ -0.37
USP30-201ENST00000257548 MYBPC3Q14896 1274 aa12.77□□□□□ -0.37
USP30-201ENST00000257548 MFSD4BQ5TF39 518 aa12.77□□□□□ -0.37
USP30-201ENST00000257548 SPATA31D4Q6ZUB0 917 aa12.77□□□□□ -0.37
USP30-201ENST00000257548 ACAD11Q709F0 780 aa12.77□□□□□ -0.37
USP30-201ENST00000257548 SNX32Q86XE0 403 aa12.77□□□□□ -0.37
USP30-201ENST00000257548 UBA3Q8TBC4 463 aa12.77□□□□□ -0.37
USP30-201ENST00000257548 CYGBQ8WWM9 190 aa12.77□□□□□ -0.37
USP30-201ENST00000257548 CCDC97Q96F63 343 aaPredicted RBP12.77□□□□□ -0.37
USP30-201ENST00000257548 WRNIP1Q96S55 665 aa12.77□□□□□ -0.37
USP30-201ENST00000257548 P2RX7Q99572 595 aaKnown RBP12.77□□□□□ -0.37
USP30-201ENST00000257548 INO80BQ9C086 356 aaPredicted RBP12.77□□□□□ -0.37
USP30-201ENST00000257548 TBC1D23Q9NUY8 699 aa12.77□□□□□ -0.37
USP30-201ENST00000257548 RRN3Q9NYV6 651 aa12.77□□□□□ -0.37
USP30-201ENST00000257548 NDUFA13Q9P0J0 144 aa12.77□□□□□ -0.37
USP30-201ENST00000257548 POLLQ9UGP5 575 aa12.77□□□□□ -0.37
USP30-201ENST00000257548 BCL9LQ86UU0 1499 aa12.77□□□□□ -0.37
USP30-201ENST00000257548 CD48P09326 243 aa12.76□□□□□ -0.37
USP30-201ENST00000257548 EEF1DP29692 281 aaKnown RBP12.76□□□□□ -0.37
USP30-201ENST00000257548 NLRP11P59045 1033 aaKnown RBP12.76□□□□□ -0.37
USP30-201ENST00000257548 PLEKHA7Q6IQ23 1121 aa12.76□□□□□ -0.37
USP30-201ENST00000257548 ABRAQ8N0Z2 381 aa12.76□□□□□ -0.37
USP30-201ENST00000257548 RNF169Q8NCN4 708 aa12.76□□□□□ -0.37
USP30-201ENST00000257548 ZNF398Q8TD17 642 aa12.76□□□□□ -0.37
USP30-201ENST00000257548 CPT1BQ92523 772 aa12.76□□□□□ -0.37
USP30-201ENST00000257548 VAV3Q9UKW4 847 aa12.76□□□□□ -0.37
USP30-201ENST00000257548 STRCQ7RTU9 1775 aa12.76□□□□□ -0.37
USP30-201ENST00000257548 SMIM31A0A1B0GVY4 71 aa12.76□□□□□ -0.37
USP30-201ENST00000257548 TTLL13PA6NNM8 815 aa12.76□□□□□ -0.37
USP30-201ENST00000257548 H3BSA7 217 aa12.76□□□□□ -0.37
USP30-201ENST00000257548 CCNG1P51959 295 aa12.76□□□□□ -0.37
USP30-201ENST00000257548 RPS6KA2Q15349 733 aa12.76□□□□□ -0.37
USP30-201ENST00000257548 CCDC14Q49A88 953 aa12.76□□□□□ -0.37
USP30-201ENST00000257548 DPY19L2Q6NUT2 758 aa12.76□□□□□ -0.37
USP30-201ENST00000257548 KATNAL2Q8IYT4 538 aa12.76□□□□□ -0.37
USP30-201ENST00000257548 STKLD1Q8NE28 680 aa12.76□□□□□ -0.37
USP30-201ENST00000257548 PIWIL2Q8TC59 973 aaKnown RBP12.76□□□□□ -0.37
USP30-201ENST00000257548 CNKSR2Q8WXI2 1034 aa12.76□□□□□ -0.37
USP30-201ENST00000257548 GATA6Q92908 595 aa12.76□□□□□ -0.37
USP30-201ENST00000257548 TLK1Q9UKI8 766 aa12.76□□□□□ -0.37
USP30-201ENST00000257548 RPL26L1Q9UNX3 145 aaKnown RBP12.76□□□□□ -0.37
USP30-201ENST00000257548 SPEF2Q9C093 1822 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms